| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496172
Identifier: 34496172
GI number: 34496172
Start: 744085
End: 744612
Strand: Reverse
Name: 34496172
Synonym: CV_0717
Alternate gene names: NA
Gene position: 744612-744085 (Counterclockwise)
Preceding gene: 34496173
Following gene: 34496171
Centisome position: 15.67
GC content: 64.58
Gene sequence:
>528_bases ATGGAACCCCACCCGCTGAATGCCTGGCTGCAGCATGGCGATGCCGGCTTGCAGGCCTGGCAGCCGTTGATGCGCCAATT TTTCTTCGCCGGCCTGCCGGCCCACCATGACTGGAAGTCCGGCCTGCAGGCCGGACTGGAGCGCAAGCAGCGCCTGGACG AATGGCAACGCGGAGAAAGCCACCAGTGGCGGCAGGCGCTGAGGCATCATGTCGACGCCGACGGCTGGCTGGACTACTGC CAGCAATGCCAGGACATCGGCCAGCAGTTCGGCCACCAGCTGTTGAATTGGCAGTTGAAGCTGCTGACGCTGTGGCGGCA GCACGGCTACGAATTGCTGCGCAATCTGCTGGAATCGCGCGGCGGCGCCGACGACCTGCTGGCGTTCAACGCCCTGGGGC AGAGCATCAGGCAAAGCATGGGCGTGCACCAGGAAGACCTGCAGCAATTGCTGACCGGCTTCTCCCCGGCCCTGCAGGAC TGCCTGCAGCAATTCCTCGCCGCCAAAACCGAGCGGGTAGTCTCCTAG
Upstream 100 bases:
>100_bases GCAATCCCGACTACTACGCCAAGAACGCGCCGCAACTCTCCGCCATCCGCGCGATGGTGGAGCGTCTTGACAGCCCCCGC CCATGAAAAGGAAACCCGAG
Downstream 100 bases:
>100_bases CGTCCGCCGCCGGCCTCCATCGCCGGGGCCGGCTCTTCTCCCCTCGCGACGCTGCAGGCGGCGATGGCGGCTTCCCCGCC TCCGGACTCGCCCCTCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MEPHPLNAWLQHGDAGLQAWQPLMRQFFFAGLPAHHDWKSGLQAGLERKQRLDEWQRGESHQWRQALRHHVDADGWLDYC QQCQDIGQQFGHQLLNWQLKLLTLWRQHGYELLRNLLESRGGADDLLAFNALGQSIRQSMGVHQEDLQQLLTGFSPALQD CLQQFLAAKTERVVS
Sequences:
>Translated_175_residues MEPHPLNAWLQHGDAGLQAWQPLMRQFFFAGLPAHHDWKSGLQAGLERKQRLDEWQRGESHQWRQALRHHVDADGWLDYC QQCQDIGQQFGHQLLNWQLKLLTLWRQHGYELLRNLLESRGGADDLLAFNALGQSIRQSMGVHQEDLQQLLTGFSPALQD CLQQFLAAKTERVVS >Mature_175_residues MEPHPLNAWLQHGDAGLQAWQPLMRQFFFAGLPAHHDWKSGLQAGLERKQRLDEWQRGESHQWRQALRHHVDADGWLDYC QQCQDIGQQFGHQLLNWQLKLLTLWRQHGYELLRNLLESRGGADDLLAFNALGQSIRQSMGVHQEDLQQLLTGFSPALQD CLQQFLAAKTERVVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20282; Mature: 20282
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPHPLNAWLQHGDAGLQAWQPLMRQFFFAGLPAHHDWKSGLQAGLERKQRLDEWQRGES CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC HQWRQALRHHVDADGWLDYCQQCQDIGQQFGHQLLNWQLKLLTLWRQHGYELLRNLLESR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGADDLLAFNALGQSIRQSMGVHQEDLQQLLTGFSPALQDCLQQFLAAKTERVVS CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEPHPLNAWLQHGDAGLQAWQPLMRQFFFAGLPAHHDWKSGLQAGLERKQRLDEWQRGES CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC HQWRQALRHHVDADGWLDYCQQCQDIGQQFGHQLLNWQLKLLTLWRQHGYELLRNLLESR HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGADDLLAFNALGQSIRQSMGVHQEDLQQLLTGFSPALQDCLQQFLAAKTERVVS CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA