| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is mdtP [H]
Identifier: 34496165
GI number: 34496165
Start: 736207
End: 737646
Strand: Reverse
Name: mdtP [H]
Synonym: CV_0710
Alternate gene names: 34496165
Gene position: 737646-736207 (Counterclockwise)
Preceding gene: 34496169
Following gene: 34496164
Centisome position: 15.53
GC content: 72.29
Gene sequence:
>1440_bases ATGAGAACCGCATATTTTCGCTGGCGGCCGCTGCCAGCAGCCGGCCTCTCCGCAGCGCTGACGCTGCTGGGAGGCTGCGC GATGACGCCGGACATGGGGCCGGCGCCGCAGATCAAACCGCTGCAACAATACCAGAATACGCAAAGCCTGCCCGCCTCGG ACGGCGTCTGGGCCAATGAACAATGGTGGAAAAAATACGGCGACGCGCAACTGAACGCGCTGATGGACGAGGCGCTGAGC CAGGCGCCCGACCTCGCCGCCGCCCGCGCCCGCGTCGAGCGCGCCGAAGGCCTGGCGCAGCAAGCCGGCGCCGCGCGGCT GCCCGGCGCGGACCTGAACGCCGCGATCGACCGCGACAAGCAGAGCTACAACAACGGCATGCCGGCGCCGGCTGGCTTCA ACACCAGCGGCCGCGCCACGCTGGACTTCAGTTACGAACTGGACTTCTGGGGCAAGAACCGCGCCTCGCTGGCCGCCGCG ACCTCCGACCTGACCGCCGCCCGCGCCGACGCGGCCCAGGCCAGGCTGATGCTGACCGCCTCGCTGGCCGCCGGCTATGC CGAGCTGGCGCGGCTGTTTTCCGAGCGCGACGCCGCCGCCCAGGCGCTGGAGGTGCGCGCGCACACCGCCAAGCTGATGC TGCAGCGTTGGCAGCAAGGCATGGACACCCGCGGCGTGCTGCGCCAGGCGGAGTCGCGCGAGGCCGCCGCCCGCGCCGAC CTGGCCGCCGCCGACGAGAGCATCGCCTTGCAACGCCACAGCCTGGCGGCGCTGATCGGCGCCGGACCAGACCGCGGCCT GGCCATCGCCCGTCCGGCCGCCGGCTTGTTTCGCGAACAGCGGCTCCCGGCCACGCTGGCAGCCGAATTGCTGGGCCGCC GACCGGATCTCGCCGCCGCCCGGCTCCGCGCCGAAGCCGCGGCCAAGCGCATCGACGTCGCCCAGGCCCAGTTTTACCCC AACGTCAACCTCACCGCCTTCGTCGGCGCCCAGTCGCTGGGGTTGGGGCTGTTCGACAAGGCCGGTTCCGGCATAGCCGG CGTCGGCCCGGCGATCCATCTGCCGATATTCCGCGGCGGCCAGTTGCAAGGCCAGTACCGCGCCGCGCGCGGCGACTACG ACGCCGCCGTCGCCAGCTACGACGCCACGCTGAGCCAGGCGCTGCGCGAAGTGGCCGACGCCGTCTCCAGCCAGGCCGCG CTGACGCCGCAACTGCAACAGCGCCAGCAGGCGCTGACGGCCGCCGACGAGGCCTACCGCGTCAGCCGGAACCGCTTCGA CGGCGGTCTCGCCAATTACCTGGACGTGCTGACCGCCGAAGACAGCGTGATCGCCGCCCGCCGCGGCCTGGCCAGTCTGC AGGCCCGCCGCTTCTCGCTGGATGTGGCGCTTGTCAAGGCGCTGGGCGGCGGCTACCAGGCAGCCGAACCCGCCCGCTGA
Upstream 100 bases:
>100_bases CTGAACCGTACGGTTCAATTTTTCTTGACAAGAAATCTCGCTCCGCCATATAACTATACCGTACCGTACAGTTAAATCAA AACACTCCCGGACAGAGACG
Downstream 100 bases:
>100_bases GGCCGCCGGCAAACCCATACCAGGACAATCCATCATGAGCGAAAACGCACAAGCCCTGCCGGCCGCCGCGGCGCCCGCCG CCGCCGGCCGTCCCCTGCAA
Product: outer membrane multidrug resistance lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MRTAYFRWRPLPAAGLSAALTLLGGCAMTPDMGPAPQIKPLQQYQNTQSLPASDGVWANEQWWKKYGDAQLNALMDEALS QAPDLAAARARVERAEGLAQQAGAARLPGADLNAAIDRDKQSYNNGMPAPAGFNTSGRATLDFSYELDFWGKNRASLAAA TSDLTAARADAAQARLMLTASLAAGYAELARLFSERDAAAQALEVRAHTAKLMLQRWQQGMDTRGVLRQAESREAAARAD LAAADESIALQRHSLAALIGAGPDRGLAIARPAAGLFREQRLPATLAAELLGRRPDLAAARLRAEAAAKRIDVAQAQFYP NVNLTAFVGAQSLGLGLFDKAGSGIAGVGPAIHLPIFRGGQLQGQYRAARGDYDAAVASYDATLSQALREVADAVSSQAA LTPQLQQRQQALTAADEAYRVSRNRFDGGLANYLDVLTAEDSVIAARRGLASLQARRFSLDVALVKALGGGYQAAEPAR
Sequences:
>Translated_479_residues MRTAYFRWRPLPAAGLSAALTLLGGCAMTPDMGPAPQIKPLQQYQNTQSLPASDGVWANEQWWKKYGDAQLNALMDEALS QAPDLAAARARVERAEGLAQQAGAARLPGADLNAAIDRDKQSYNNGMPAPAGFNTSGRATLDFSYELDFWGKNRASLAAA TSDLTAARADAAQARLMLTASLAAGYAELARLFSERDAAAQALEVRAHTAKLMLQRWQQGMDTRGVLRQAESREAAARAD LAAADESIALQRHSLAALIGAGPDRGLAIARPAAGLFREQRLPATLAAELLGRRPDLAAARLRAEAAAKRIDVAQAQFYP NVNLTAFVGAQSLGLGLFDKAGSGIAGVGPAIHLPIFRGGQLQGQYRAARGDYDAAVASYDATLSQALREVADAVSSQAA LTPQLQQRQQALTAADEAYRVSRNRFDGGLANYLDVLTAEDSVIAARRGLASLQARRFSLDVALVKALGGGYQAAEPAR >Mature_479_residues MRTAYFRWRPLPAAGLSAALTLLGGCAMTPDMGPAPQIKPLQQYQNTQSLPASDGVWANEQWWKKYGDAQLNALMDEALS QAPDLAAARARVERAEGLAQQAGAARLPGADLNAAIDRDKQSYNNGMPAPAGFNTSGRATLDFSYELDFWGKNRASLAAA TSDLTAARADAAQARLMLTASLAAGYAELARLFSERDAAAQALEVRAHTAKLMLQRWQQGMDTRGVLRQAESREAAARAD LAAADESIALQRHSLAALIGAGPDRGLAIARPAAGLFREQRLPATLAAELLGRRPDLAAARLRAEAAAKRIDVAQAQFYP NVNLTAFVGAQSLGLGLFDKAGSGIAGVGPAIHLPIFRGGQLQGQYRAARGDYDAAVASYDATLSQALREVADAVSSQAA LTPQLQQRQQALTAADEAYRVSRNRFDGGLANYLDVLTAEDSVIAARRGLASLQARRFSLDVALVKALGGGYQAAEPAR
Specific function: Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride [H]
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
Organism=Escherichia coli, GI2367348, Length=469, Percent_Identity=30.7036247334755, Blast_Score=169, Evalue=3e-43, Organism=Escherichia coli, GI1786785, Length=453, Percent_Identity=26.4900662251656, Blast_Score=132, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 - InterPro: IPR010131 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 50721; Mature: 50721
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTAYFRWRPLPAAGLSAALTLLGGCAMTPDMGPAPQIKPLQQYQNTQSLPASDGVWANE CCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCH QWWKKYGDAQLNALMDEALSQAPDLAAARARVERAEGLAQQAGAARLPGADLNAAIDRDK HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCH QSYNNGMPAPAGFNTSGRATLDFSYELDFWGKNRASLAAATSDLTAARADAAQARLMLTA HHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLAAGYAELARLFSERDAAAQALEVRAHTAKLMLQRWQQGMDTRGVLRQAESREAAARAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LAAADESIALQRHSLAALIGAGPDRGLAIARPAAGLFREQRLPATLAAELLGRRPDLAAA HHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCHHHHHHHHCCCCCHHHH RLRAEAAAKRIDVAQAQFYPNVNLTAFVGAQSLGLGLFDKAGSGIAGVGPAIHLPIFRGG HHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHCCCCHHCCCCCCCCCCCEEEECEECCC QLQGQYRAARGDYDAAVASYDATLSQALREVADAVSSQAALTPQLQQRQQALTAADEAYR CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VSRNRFDGGLANYLDVLTAEDSVIAARRGLASLQARRFSLDVALVKALGGGYQAAEPAR HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRTAYFRWRPLPAAGLSAALTLLGGCAMTPDMGPAPQIKPLQQYQNTQSLPASDGVWANE CCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCH QWWKKYGDAQLNALMDEALSQAPDLAAARARVERAEGLAQQAGAARLPGADLNAAIDRDK HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCH QSYNNGMPAPAGFNTSGRATLDFSYELDFWGKNRASLAAATSDLTAARADAAQARLMLTA HHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLAAGYAELARLFSERDAAAQALEVRAHTAKLMLQRWQQGMDTRGVLRQAESREAAARAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LAAADESIALQRHSLAALIGAGPDRGLAIARPAAGLFREQRLPATLAAELLGRRPDLAAA HHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCHHHHHHHHCCCCCHHHH RLRAEAAAKRIDVAQAQFYPNVNLTAFVGAQSLGLGLFDKAGSGIAGVGPAIHLPIFRGG HHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHCCCCHHCCCCCCCCCCCEEEECEECCC QLQGQYRAARGDYDAAVASYDATLSQALREVADAVSSQAALTPQLQQRQQALTAADEAYR CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VSRNRFDGGLANYLDVLTAEDSVIAARRGLASLQARRFSLDVALVKALGGGYQAAEPAR HHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]