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The map label for this gene is yaeB [H]

Identifier: 34496114

GI number: 34496114

Start: 688283

End: 688981

Strand: Reverse

Name: yaeB [H]

Synonym: CV_0659

Alternate gene names: 34496114

Gene position: 688981-688283 (Counterclockwise)

Preceding gene: 34496115

Following gene: 34496113

Centisome position: 14.5

GC content: 68.67

Gene sequence:

>699_bases
ATGAACTACACCTTCGAGCCGATAGGCGTCATCCGTTCGCCGTATCGCGAGAAATTCGGCATCCCGCGCCAGCCGTCGCT
GGTCAGCGCGGCCCGCATGCGGCTGGAGCTGTCGCCGCCGTACGACCACCCGGACTGCGTGCGCGGCCTGGCTGAGTTTT
CCCATGTCTGGATCAGCTTCGTGTTCCACCAGACCATGGACCGGGGCTGGCAGCCGCTGGTGCGGCCGCCGCGGCTGGGC
GGCAACGCCAAGGTGGGCGTGTTCGCCAGCCGCTCCACCCACCGCCCCAACCCGATGGGCCTGTCGCTGGTGGAACTGCT
TGCGGTGAACGTCGACAACGGCGTCACGCTGGAGCTGGCCGGCGCCGATCTGCTGGACGGCACGCCGGTGCTGGACATCA
AGCCCTACATCCCATTCGTGGAGTCGCGTCCCGAGGCGTCGGGCGGCTTCGTCGACGGCCCTCCCCCGCAGCTGCGGGTG
GAGTGGAGCGAGGCCGCGCGGCGGCGCCTGGATCAGACGGACGCGCCTGCCGGCTTCGCCCAGCTGGTGGAGCAGGTGCT
GGCGCAGGATCCGCGCCCGGCCTACCAGGACGATCCAGAACGCGTCTACGGCGTGACGCTGTATTGCTACAATGTGCGCT
TCGGCATCGCCGACGGCGTCGCCCGCGTGCTTGAAATTCTGCCCGCGGCACAAAACTAA

Upstream 100 bases:

>100_bases
TGCTGCTGCCGATGAGCCGGCTCAGCGCGCGCTACAACAAGCACTTCGTCGGCTGAGGCCAGCCGGCTGCCGACGCCGGC
CGGGATGCTACAATCCCGGC

Downstream 100 bases:

>100_bases
TTCGCATCCGCCCGGTCATATCCGGGCAATTCAAACCTACCAGGAAAATAAAACATGACCACTCGCGCGAAGACGATCGT
ACTCGCCTTCACCATGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MNYTFEPIGVIRSPYREKFGIPRQPSLVSAARMRLELSPPYDHPDCVRGLAEFSHVWISFVFHQTMDRGWQPLVRPPRLG
GNAKVGVFASRSTHRPNPMGLSLVELLAVNVDNGVTLELAGADLLDGTPVLDIKPYIPFVESRPEASGGFVDGPPPQLRV
EWSEAARRRLDQTDAPAGFAQLVEQVLAQDPRPAYQDDPERVYGVTLYCYNVRFGIADGVARVLEILPAAQN

Sequences:

>Translated_232_residues
MNYTFEPIGVIRSPYREKFGIPRQPSLVSAARMRLELSPPYDHPDCVRGLAEFSHVWISFVFHQTMDRGWQPLVRPPRLG
GNAKVGVFASRSTHRPNPMGLSLVELLAVNVDNGVTLELAGADLLDGTPVLDIKPYIPFVESRPEASGGFVDGPPPQLRV
EWSEAARRRLDQTDAPAGFAQLVEQVLAQDPRPAYQDDPERVYGVTLYCYNVRFGIADGVARVLEILPAAQN
>Mature_232_residues
MNYTFEPIGVIRSPYREKFGIPRQPSLVSAARMRLELSPPYDHPDCVRGLAEFSHVWISFVFHQTMDRGWQPLVRPPRLG
GNAKVGVFASRSTHRPNPMGLSLVELLAVNVDNGVTLELAGADLLDGTPVLDIKPYIPFVESRPEASGGFVDGPPPQLRV
EWSEAARRRLDQTDAPAGFAQLVEQVLAQDPRPAYQDDPERVYGVTLYCYNVRFGIADGVARVLEILPAAQN

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=143, Percent_Identity=46.1538461538462, Blast_Score=120, Evalue=1e-27,
Organism=Escherichia coli, GI1786393, Length=232, Percent_Identity=50.8620689655172, Blast_Score=229, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24586408, Length=140, Percent_Identity=45, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI45552503, Length=140, Percent_Identity=45, Blast_Score=112, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 25719; Mature: 25719

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYTFEPIGVIRSPYREKFGIPRQPSLVSAARMRLELSPPYDHPDCVRGLAEFSHVWISF
CCCCCCCHHHHHCCHHHHCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHH
VFHQTMDRGWQPLVRPPRLGGNAKVGVFASRSTHRPNPMGLSLVELLAVNVDNGVTLELA
HHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEC
GADLLDGTPVLDIKPYIPFVESRPEASGGFVDGPPPQLRVEWSEAARRRLDQTDAPAGFA
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCHHHH
QLVEQVLAQDPRPAYQDDPERVYGVTLYCYNVRFGIADGVARVLEILPAAQN
HHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNYTFEPIGVIRSPYREKFGIPRQPSLVSAARMRLELSPPYDHPDCVRGLAEFSHVWISF
CCCCCCCHHHHHCCHHHHCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHH
VFHQTMDRGWQPLVRPPRLGGNAKVGVFASRSTHRPNPMGLSLVELLAVNVDNGVTLELA
HHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEEC
GADLLDGTPVLDIKPYIPFVESRPEASGGFVDGPPPQLRVEWSEAARRRLDQTDAPAGFA
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCHHHH
QLVEQVLAQDPRPAYQDDPERVYGVTLYCYNVRFGIADGVARVLEILPAAQN
HHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1459951; 9278503 [H]