| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496084
Identifier: 34496084
GI number: 34496084
Start: 659378
End: 660061
Strand: Reverse
Name: 34496084
Synonym: CV_0629
Alternate gene names: NA
Gene position: 660061-659378 (Counterclockwise)
Preceding gene: 34496085
Following gene: 34496083
Centisome position: 13.89
GC content: 68.86
Gene sequence:
>684_bases ATGCCACGTCCGCTCATCTTCGCCAGTCTGTGCAGTCTGCTGCTGGCCGCCCCGCTCTGCCGCGCCGACGGCGGCAAAGA CCTGGACCTTTCCATCAGCACCGAGCTGATGACGCGGCAGACTTCCTACGGCAACTCCTCGCGGCTGCAACCCAGCGTGG ACTTGCAGTACCGCACCCGTTTCGGCGCGCTGTACGTGCAGGACGGCGAAGGCGGCTGGGCGCTGCCGGCGCCGGGCGGA TGGGTGTCGCTGGGCGTGGCCAGCGAGCCGGCCTGGAGCCTGGGCGGCGGCGTGTCGCAAAGCCTGTCCATCGCGCGCTA CGGTTTCGACCTGCCGCGCGACGGCAGCCTGTCCTTCGGCTACGCCAGCCGCATCGGCGACAGCCATCCCGGCCAGCTGC TGGCGGCCACGCTGGACGCGCCGCTGGGCGAGTGGATGGGCCAGAAGTTCTCGCTGCTGGGCTGGGCCAGCCTGGCCAAC CAGAAACGGCGGCTGGGTTTGAATCACCATGACGCCGGATCAGGCTGGCAGCTGGAGCAGAGCAATCTCATGCTGGTGAT GTCGTATCCATTATCCCGCCACTGGACGCTGGACCTGGGCGCCGGCAGCCGCTGGGCGGCGGAAAACACCGGCGAGCACA CCGCCGGCTGGCAGACGCTGCTGGGCTTCACCTGGAAGCTGTGA
Upstream 100 bases:
>100_bases CGGCCGGCAACGATCCGCATCTCGCGCGCTTCGCCGCCAAGTTGGCTAAGATAAGCGCTTGACCGGGCCGCGCCGCGGCC CTTCCCATACCGGAGTCCCG
Downstream 100 bases:
>100_bases TGCGCTTCGATCCGCTGCCGGCCGCAGACTGCCTGATAGACAGCCACTGCCATCTGGACGCGCCGGAACTGGCGCCGGAC GTTGACGGCGTGGTGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MPRPLIFASLCSLLLAAPLCRADGGKDLDLSISTELMTRQTSYGNSSRLQPSVDLQYRTRFGALYVQDGEGGWALPAPGG WVSLGVASEPAWSLGGGVSQSLSIARYGFDLPRDGSLSFGYASRIGDSHPGQLLAATLDAPLGEWMGQKFSLLGWASLAN QKRRLGLNHHDAGSGWQLEQSNLMLVMSYPLSRHWTLDLGAGSRWAAENTGEHTAGWQTLLGFTWKL
Sequences:
>Translated_227_residues MPRPLIFASLCSLLLAAPLCRADGGKDLDLSISTELMTRQTSYGNSSRLQPSVDLQYRTRFGALYVQDGEGGWALPAPGG WVSLGVASEPAWSLGGGVSQSLSIARYGFDLPRDGSLSFGYASRIGDSHPGQLLAATLDAPLGEWMGQKFSLLGWASLAN QKRRLGLNHHDAGSGWQLEQSNLMLVMSYPLSRHWTLDLGAGSRWAAENTGEHTAGWQTLLGFTWKL >Mature_226_residues PRPLIFASLCSLLLAAPLCRADGGKDLDLSISTELMTRQTSYGNSSRLQPSVDLQYRTRFGALYVQDGEGGWALPAPGGW VSLGVASEPAWSLGGGVSQSLSIARYGFDLPRDGSLSFGYASRIGDSHPGQLLAATLDAPLGEWMGQKFSLLGWASLANQ KRRLGLNHHDAGSGWQLEQSNLMLVMSYPLSRHWTLDLGAGSRWAAENTGEHTAGWQTLLGFTWKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24508; Mature: 24377
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPLIFASLCSLLLAAPLCRADGGKDLDLSISTELMTRQTSYGNSSRLQPSVDLQYRTR CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCEEEEEE FGALYVQDGEGGWALPAPGGWVSLGVASEPAWSLGGGVSQSLSIARYGFDLPRDGSLSFG EEEEEEEECCCCEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC YASRIGDSHPGQLLAATLDAPLGEWMGQKFSLLGWASLANQKRRLGLNHHDAGSGWQLEQ HHHHCCCCCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEC SNLMLVMSYPLSRHWTLDLGAGSRWAAENTGEHTAGWQTLLGFTWKL CCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHEEEECC >Mature Secondary Structure PRPLIFASLCSLLLAAPLCRADGGKDLDLSISTELMTRQTSYGNSSRLQPSVDLQYRTR CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCEEEEEE FGALYVQDGEGGWALPAPGGWVSLGVASEPAWSLGGGVSQSLSIARYGFDLPRDGSLSFG EEEEEEEECCCCEECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC YASRIGDSHPGQLLAATLDAPLGEWMGQKFSLLGWASLANQKRRLGLNHHDAGSGWQLEQ HHHHCCCCCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEC SNLMLVMSYPLSRHWTLDLGAGSRWAAENTGEHTAGWQTLLGFTWKL CCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA