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The map label for this gene is gbpA [H]

Identifier: 34496009

GI number: 34496009

Start: 591674

End: 592819

Strand: Reverse

Name: gbpA [H]

Synonym: CV_0554

Alternate gene names: 34496009

Gene position: 592819-591674 (Counterclockwise)

Preceding gene: 34496016

Following gene: 34496008

Centisome position: 12.48

GC content: 64.92

Gene sequence:

>1146_bases
ATGAAACTGCATTGGCATCTACCCGCCGCGCTGGCCCTGAGCTGCCTGAGCGCCCCGCTGTGGGCCCACGGCACGATGGA
AATTCCGATCAACCGCACCTACAGCTGCTTCCTGGAAGGTCCCGAAGCCCCCAAGACTCCCGCCTGCCAGGCCGCCAAAC
AGGCGGGCGGCACCCAGGCGATGTACGACTGGAACGGCATCAACCAGAACCCGTCCGGCGACAACCACCAGGCGGTGGTG
CCGGACGGCACGCTGTGCGGCGGCGGCAAAGCCGAATTCAAGGGCTTCAACCTGGCTCGCGAGGATTGGCGCACGACCAA
CATCGTGCCGGACGCCAACGGCAACTACGAATTCATCTACAAGGCCACCGCGCCGCACGCCACCAAGTACTTCAAGTTTT
ACGTGACCAAAAACGGCTGGAATCCGACGCAAGCGTTGAAATGGTCGGACCTGGAGCTGTTCGGCACCGTCAACGGCAAT
CCGCAACAAGACGCCGGCAAGCGCTACCACATGACGCTGAAGCTGCCGCAAGGCAAGACTGGAAAGCACATCATCTTCAA
CGTCTGGAAACGATCGGACAGCGAGGAGGCGTTCTATTCGTGCTCCGACGTCAACTTCGGCGGCGACGCTGCGCCGCCGA
CGGCCAATCCGTGGAAGGAGATCGGCAGCGTCGCCGCGCGCGAAAACCTGCCGGCGGGCAGCAGCGCCACGCTGCGCGTG
TTCGACGGCCAGGGCCGCGACGCCGAAAAACACACGGTGGCGCTGAATGTCTCATCCGGCCAGACCGCCAACTGGCCGTA
CGAGTTGGCGCAGAAGGTCAACGCCGCTTCGCGGGCCATCCGCATCGGCGTGCTGAAATCGCAGCAACGCGCCGTTTCCA
TCGTCCCGGTGAAAGACGCCACCGCCAACCGCGTTTACCTGAACGACGGCTACCCGGGCTATGGCTTCGCGATCGACCTG
AACAAGGGCGACGGCGGCGTCGCCACGCCGCCCGCGGCCAACAGCTGGAAGGAAGGCGGGAAATACGCGGCCGGCCAGGT
GGTCAGCTACCAGGGCCGCTCATACCGCTGCCTGCAGGCCCATACCGCCTGGGCCGGCGCCGGCTGGACGCCGTCTACCC
AGTCCACGCTGTGGCAAGCCATCTGA

Upstream 100 bases:

>100_bases
GCTATTGATCGAATTTTCAATCATTAAGCCATTTAAAGGACAGCATACGTCCTGGCTGATGACCATGCGCTTGCATACCA
CTACCAAACAAGGAGTCCGC

Downstream 100 bases:

>100_bases
TCCGGCCTTTCCGATGAAAAACGCCGCTCTATCGAGCGGCGTTTTTCATTGCGGCTGCCGCGCCGGCCAGATCGCAGCGC
GCATGCCCATGGCTCCGTTG

Product: carbohydrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKLHWHLPAALALSCLSAPLWAHGTMEIPINRTYSCFLEGPEAPKTPACQAAKQAGGTQAMYDWNGINQNPSGDNHQAVV
PDGTLCGGGKAEFKGFNLAREDWRTTNIVPDANGNYEFIYKATAPHATKYFKFYVTKNGWNPTQALKWSDLELFGTVNGN
PQQDAGKRYHMTLKLPQGKTGKHIIFNVWKRSDSEEAFYSCSDVNFGGDAAPPTANPWKEIGSVAARENLPAGSSATLRV
FDGQGRDAEKHTVALNVSSGQTANWPYELAQKVNAASRAIRIGVLKSQQRAVSIVPVKDATANRVYLNDGYPGYGFAIDL
NKGDGGVATPPAANSWKEGGKYAAGQVVSYQGRSYRCLQAHTAWAGAGWTPSTQSTLWQAI

Sequences:

>Translated_381_residues
MKLHWHLPAALALSCLSAPLWAHGTMEIPINRTYSCFLEGPEAPKTPACQAAKQAGGTQAMYDWNGINQNPSGDNHQAVV
PDGTLCGGGKAEFKGFNLAREDWRTTNIVPDANGNYEFIYKATAPHATKYFKFYVTKNGWNPTQALKWSDLELFGTVNGN
PQQDAGKRYHMTLKLPQGKTGKHIIFNVWKRSDSEEAFYSCSDVNFGGDAAPPTANPWKEIGSVAARENLPAGSSATLRV
FDGQGRDAEKHTVALNVSSGQTANWPYELAQKVNAASRAIRIGVLKSQQRAVSIVPVKDATANRVYLNDGYPGYGFAIDL
NKGDGGVATPPAANSWKEGGKYAAGQVVSYQGRSYRCLQAHTAWAGAGWTPSTQSTLWQAI
>Mature_381_residues
MKLHWHLPAALALSCLSAPLWAHGTMEIPINRTYSCFLEGPEAPKTPACQAAKQAGGTQAMYDWNGINQNPSGDNHQAVV
PDGTLCGGGKAEFKGFNLAREDWRTTNIVPDANGNYEFIYKATAPHATKYFKFYVTKNGWNPTQALKWSDLELFGTVNGN
PQQDAGKRYHMTLKLPQGKTGKHIIFNVWKRSDSEEAFYSCSDVNFGGDAAPPTANPWKEIGSVAARENLPAGSSATLRV
FDGQGRDAEKHTVALNVSSGQTANWPYELAQKVNAASRAIRIGVLKSQQRAVSIVPVKDATANRVYLNDGYPGYGFAIDL
NKGDGGVATPPAANSWKEGGKYAAGQVVSYQGRSYRCLQAHTAWAGAGWTPSTQSTLWQAI

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF02839 CBM_5_12; PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 41270; Mature: 41270

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLHWHLPAALALSCLSAPLWAHGTMEIPINRTYSCFLEGPEAPKTPACQAAKQAGGTQA
CEEEECCHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHCCCCEE
MYDWNGINQNPSGDNHQAVVPDGTLCGGGKAEFKGFNLAREDWRTTNIVPDANGNYEFIY
EEECCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEE
KATAPHATKYFKFYVTKNGWNPTQALKWSDLELFGTVNGNPQQDAGKRYHMTLKLPQGKT
EECCCCCEEEEEEEEEECCCCHHHCEEECCEEEEEECCCCCCCCCCCEEEEEEECCCCCC
GKHIIFNVWKRSDSEEAFYSCSDVNFGGDAAPPTANPWKEIGSVAARENLPAGSSATLRV
CCEEEEEEECCCCCCHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEE
FDGQGRDAEKHTVALNVSSGQTANWPYELAQKVNAASRAIRIGVLKSQQRAVSIVPVKDA
ECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEECCC
TANRVYLNDGYPGYGFAIDLNKGDGGVATPPAANSWKEGGKYAAGQVVSYQGRSYRCLQA
CCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCEECCEEEEECCCCEEEEEE
HTAWAGAGWTPSTQSTLWQAI
CCEECCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MKLHWHLPAALALSCLSAPLWAHGTMEIPINRTYSCFLEGPEAPKTPACQAAKQAGGTQA
CEEEECCHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHCCCCEE
MYDWNGINQNPSGDNHQAVVPDGTLCGGGKAEFKGFNLAREDWRTTNIVPDANGNYEFIY
EEECCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEE
KATAPHATKYFKFYVTKNGWNPTQALKWSDLELFGTVNGNPQQDAGKRYHMTLKLPQGKT
EECCCCCEEEEEEEEEECCCCHHHCEEECCEEEEEECCCCCCCCCCCEEEEEEECCCCCC
GKHIIFNVWKRSDSEEAFYSCSDVNFGGDAAPPTANPWKEIGSVAARENLPAGSSATLRV
CCEEEEEEECCCCCCHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEE
FDGQGRDAEKHTVALNVSSGQTANWPYELAQKVNAASRAIRIGVLKSQQRAVSIVPVKDA
ECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEECCC
TANRVYLNDGYPGYGFAIDLNKGDGGVATPPAANSWKEGGKYAAGQVVSYQGRSYRCLQA
CCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHCCCCEECCEEEEECCCCEEEEEE
HTAWAGAGWTPSTQSTLWQAI
CCEECCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA