| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34495992
Identifier: 34495992
GI number: 34495992
Start: 575033
End: 575935
Strand: Reverse
Name: 34495992
Synonym: CV_0537
Alternate gene names: NA
Gene position: 575935-575033 (Counterclockwise)
Preceding gene: 34495997
Following gene: 34495986
Centisome position: 12.12
GC content: 57.81
Gene sequence:
>903_bases GTGATTGACGACTTCAAATCTCTTTTCCTAGTCCGGCTCGCTCAATTGCTCGATGCGACAGGCATCGCCGAGCGCGAGCG CACCGCCTGGCTGCGCGATCTGCTTGGGATCGATCTTTCCAGCGCAAACCGCAAGCTGAAAGGTGGAATCGCCTTCAATA TCGAGGAATTAGCCAAGGTCGCAAAAACCATCCATTGTTCGGCGGACTATCTGCTCGGCCTGACAGAAAACAGCGGATGC AATCCGCTTCCCGGTCTGACTTTTCAAGGACTCGGCATCCAAACCACGCTGCTCTGCGACCGGTTGCCTGCACAGGAAGC CATGGCTGTCGCAGCCAGGACGCCAGGCGAGGCTGATGGCGGCGAAGCGATGATCGCCTGGATCTCATGTCAAAGCAGTG CGCAATACGCACAACTGGTCGGATGGAAAGATGCTGAACACGGCGGCTGGTGGGTGGGAGGCCGAGACGAGGCGCCGGAA CAGGCAGCCTTGCACCGCGTCTATGCGTCGCTGAGGCTAGACGCATCGATCAGTGCTTACAGGGTAGCGGTATTAGATGA CCGCGCCGAAGCCGCTGAAGTGATGCAGGGATTTCTAGAACAAGCTGGCTACGAGGCCGATACCTATACCTGCGTCGCCG ACCTGAGCCAGTCCTTGAAACGCACTCGCTACGACGCCTTTGTTCTCGACTGGTCGATGGGAAGGGGCGAGACCACTGAG GGATTGATGGAGGAAATCCGCCGACAGCATGCGGGTACACCCATCATGCTGATCACCGGCGAAGCCAGCGAGCTAGAGAT CGAACGGGCAATCGACCAGCACGGCGTCCGCTACTTTCAAAAAACCGGGCTATTCAAGCCCATCATCGCTCAATTGAAAA AAGACCTGCGGGAACGGGGCTGA
Upstream 100 bases:
>100_bases ATAATTAGTGCACAAAATGCAATGACATGTAGCTTTCTCTATTTGTCATTCTTGCGGTTTGCTGCTAGCATTTTTTTTTC AGCGAATAGAATCTCCCGTC
Downstream 100 bases:
>100_bases GTGCATCAGTCACGCCTCTTCCACCGGCAGGCGGGCGACAAACACCGAGCCCTTGCCCGCCTCACTGCTGGCCAGGTACG CCTCTCCTCCCATCAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Response Regulator
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MIDDFKSLFLVRLAQLLDATGIAERERTAWLRDLLGIDLSSANRKLKGGIAFNIEELAKVAKTIHCSADYLLGLTENSGC NPLPGLTFQGLGIQTTLLCDRLPAQEAMAVAARTPGEADGGEAMIAWISCQSSAQYAQLVGWKDAEHGGWWVGGRDEAPE QAALHRVYASLRLDASISAYRVAVLDDRAEAAEVMQGFLEQAGYEADTYTCVADLSQSLKRTRYDAFVLDWSMGRGETTE GLMEEIRRQHAGTPIMLITGEASELEIERAIDQHGVRYFQKTGLFKPIIAQLKKDLRERG
Sequences:
>Translated_300_residues MIDDFKSLFLVRLAQLLDATGIAERERTAWLRDLLGIDLSSANRKLKGGIAFNIEELAKVAKTIHCSADYLLGLTENSGC NPLPGLTFQGLGIQTTLLCDRLPAQEAMAVAARTPGEADGGEAMIAWISCQSSAQYAQLVGWKDAEHGGWWVGGRDEAPE QAALHRVYASLRLDASISAYRVAVLDDRAEAAEVMQGFLEQAGYEADTYTCVADLSQSLKRTRYDAFVLDWSMGRGETTE GLMEEIRRQHAGTPIMLITGEASELEIERAIDQHGVRYFQKTGLFKPIIAQLKKDLRERG >Mature_300_residues MIDDFKSLFLVRLAQLLDATGIAERERTAWLRDLLGIDLSSANRKLKGGIAFNIEELAKVAKTIHCSADYLLGLTENSGC NPLPGLTFQGLGIQTTLLCDRLPAQEAMAVAARTPGEADGGEAMIAWISCQSSAQYAQLVGWKDAEHGGWWVGGRDEAPE QAALHRVYASLRLDASISAYRVAVLDDRAEAAEVMQGFLEQAGYEADTYTCVADLSQSLKRTRYDAFVLDWSMGRGETTE GLMEEIRRQHAGTPIMLITGEASELEIERAIDQHGVRYFQKTGLFKPIIAQLKKDLRERG
Specific function: Unknown
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33011; Mature: 33011
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDDFKSLFLVRLAQLLDATGIAERERTAWLRDLLGIDLSSANRKLKGGIAFNIEELAKV CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCEECCCEEECHHHHHHH AKTIHCSADYLLGLTENSGCNPLPGLTFQGLGIQTTLLCDRLPAQEAMAVAARTPGEADG HHHHHCCCHHEEEECCCCCCCCCCCCEECCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC GEAMIAWISCQSSAQYAQLVGWKDAEHGGWWVGGRDEAPEQAALHRVYASLRLDASISAY CCEEEEEEECCCCHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCEE RVAVLDDRAEAAEVMQGFLEQAGYEADTYTCVADLSQSLKRTRYDAFVLDWSMGRGETTE EEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHH GLMEEIRRQHAGTPIMLITGEASELEIERAIDQHGVRYFQKTGLFKPIIAQLKKDLRERG HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MIDDFKSLFLVRLAQLLDATGIAERERTAWLRDLLGIDLSSANRKLKGGIAFNIEELAKV CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCEECCCEEECHHHHHHH AKTIHCSADYLLGLTENSGCNPLPGLTFQGLGIQTTLLCDRLPAQEAMAVAARTPGEADG HHHHHCCCHHEEEECCCCCCCCCCCCEECCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC GEAMIAWISCQSSAQYAQLVGWKDAEHGGWWVGGRDEAPEQAALHRVYASLRLDASISAY CCEEEEEEECCCCHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCEE RVAVLDDRAEAAEVMQGFLEQAGYEADTYTCVADLSQSLKRTRYDAFVLDWSMGRGETTE EEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHH GLMEEIRRQHAGTPIMLITGEASELEIERAIDQHGVRYFQKTGLFKPIIAQLKKDLRERG HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA