| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is mlaE [H]
Identifier: 34495903
GI number: 34495903
Start: 465049
End: 465822
Strand: Reverse
Name: mlaE [H]
Synonym: CV_0448
Alternate gene names: 34495903
Gene position: 465822-465049 (Counterclockwise)
Preceding gene: 34495904
Following gene: 34495902
Centisome position: 9.8
GC content: 68.22
Gene sequence:
>774_bases CTGACCTCGCCGCTGCGCCGCCTCGGCCACCTCACCGTCAACGCCGTCTGGCGGCTGGGCTTCGCCAGCCGCTTCCTGGC GGCCATCCTGCTCAACAGCGGCCAGAGCCTGCTGCGGCTGCAGATGACCATACGCGAGATCTACTTCGCCGGCGTGATGT CGCTGATCATCATCGTGGTGTCCGGCCTGTTCGTCGGCATGGTGCTGGGCCTGCAGGGCTACACCACGCTGGCCAAGTTC GGCTCCGCCGACGCGCTGGGCGCGATGGTGGCGCTGGCGCTGCTGCGCGAGCTGGGCCCGGTGCTGGCCGCGCTGCTGTT CGCCAGCCGCGCCGGCAGCGCGATGACCGCGGAAATCGGCCTGATGAAGACCACCGAGCAGCTGGACGCGATGAGCGTGA TGGCGGTCAATCCGATGGCGCGCGTGATCGCGCCGCGCTTCTGGGCCGGCGTCGTCTCCATGCCCATCCTGGCCGCGCTG TTCAATGTGGTCGGCATCTTCGGCGGCTACCTGGTCGGCGTGGTGATGATAGGCCTGGACGCCGGGACGTTCTGGTCGCA GATGCAGGGCAACGTCGACCTGCACTACGACGTGGTCAACGGCATCATCAAGAGCCTGGTGTTCGGCATCGCCGTGACGC TGATCGCCGTGTTCGAAGGCTACGACGCCACCCCGACCGCCGCCGGCGTGTCGGCCGCCACCACCCGCACCGTGGTCACC TCGGCGCTGGTGATCCTGGCGCTGGACTTCGTGCTGACCGCCTTCATGTTCTAG
Upstream 100 bases:
>100_bases ATCAACGGCGAGGCCGACGGCCCGGTGCACTACAATTTCCCCGCCGCCACCTCGCTGGCGGCCGATCTGGGTCTGCAAGG AGGCGGGCATGCTTGATTTT
Downstream 100 bases:
>100_bases GAAAAAAACCAATGAAACGCTCTACCATTGATTTGTGGGTCGGCATCTTTGTCGCCCTCGGCATCGCCGCCGTCGTCTTC CTGTCGCTGAAGGTGGCCAA
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTSPLRRLGHLTVNAVWRLGFASRFLAAILLNSGQSLLRLQMTIREIYFAGVMSLIIIVVSGLFVGMVLGLQGYTTLAKF GSADALGAMVALALLRELGPVLAALLFASRAGSAMTAEIGLMKTTEQLDAMSVMAVNPMARVIAPRFWAGVVSMPILAAL FNVVGIFGGYLVGVVMIGLDAGTFWSQMQGNVDLHYDVVNGIIKSLVFGIAVTLIAVFEGYDATPTAAGVSAATTRTVVT SALVILALDFVLTAFMF
Sequences:
>Translated_257_residues MTSPLRRLGHLTVNAVWRLGFASRFLAAILLNSGQSLLRLQMTIREIYFAGVMSLIIIVVSGLFVGMVLGLQGYTTLAKF GSADALGAMVALALLRELGPVLAALLFASRAGSAMTAEIGLMKTTEQLDAMSVMAVNPMARVIAPRFWAGVVSMPILAAL FNVVGIFGGYLVGVVMIGLDAGTFWSQMQGNVDLHYDVVNGIIKSLVFGIAVTLIAVFEGYDATPTAAGVSAATTRTVVT SALVILALDFVLTAFMF >Mature_256_residues TSPLRRLGHLTVNAVWRLGFASRFLAAILLNSGQSLLRLQMTIREIYFAGVMSLIIIVVSGLFVGMVLGLQGYTTLAKFG SADALGAMVALALLRELGPVLAALLFASRAGSAMTAEIGLMKTTEQLDAMSVMAVNPMARVIAPRFWAGVVSMPILAALF NVVGIFGGYLVGVVMIGLDAGTFWSQMQGNVDLHYDVVNGIIKSLVFGIAVTLIAVFEGYDATPTAAGVSAATTRTVVTS ALVILALDFVLTAFMF
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=253, Percent_Identity=56.9169960474308, Blast_Score=278, Evalue=2e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 27099; Mature: 26968
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPLRRLGHLTVNAVWRLGFASRFLAAILLNSGQSLLRLQMTIREIYFAGVMSLIIIVV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SGLFVGMVLGLQGYTTLAKFGSADALGAMVALALLRELGPVLAALLFASRAGSAMTAEIG HHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LMKTTEQLDAMSVMAVNPMARVIAPRFWAGVVSMPILAALFNVVGIFGGYLVGVVMIGLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGTFWSQMQGNVDLHYDVVNGIIKSLVFGIAVTLIAVFEGYDATPTAAGVSAATTRTVVT CHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH SALVILALDFVLTAFMF HHHHHHHHHHHHHHHCC >Mature Secondary Structure TSPLRRLGHLTVNAVWRLGFASRFLAAILLNSGQSLLRLQMTIREIYFAGVMSLIIIVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SGLFVGMVLGLQGYTTLAKFGSADALGAMVALALLRELGPVLAALLFASRAGSAMTAEIG HHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LMKTTEQLDAMSVMAVNPMARVIAPRFWAGVVSMPILAALFNVVGIFGGYLVGVVMIGLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGTFWSQMQGNVDLHYDVVNGIIKSLVFGIAVTLIAVFEGYDATPTAAGVSAATTRTVVT CHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH SALVILALDFVLTAFMF HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]