| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864530
Identifier: 33864530
GI number: 33864530
Start: 2396827
End: 2397075
Strand: Direct
Name: 33864530
Synonym: PMT2266
Alternate gene names: NA
Gene position: 2396827-2397075 (Clockwise)
Preceding gene: 33864529
Following gene: 33864531
Centisome position: 99.42
GC content: 51.81
Gene sequence:
>249_bases ATGAGTTACTTCACTTGGAAAGAGGCTGGTCTCACAAGCGACTGCGCAAGCCTTGAAGCCATGGCTTCCCGTTTCGAAGA GGCTGCAAGTCTGATGCGACGCATGGCCCAAGAAGGCTTTCGGCTGGAACAGAACATGAAAAAACAACGCATCACTCATC CTGATCCCGGTGTATTCGAAGCCTGGGGGTTCATCAGCGAAGAACCAGCCTTTCGACAGCTCACGCTGATCCCTGATCTC AAAGTGTAA
Upstream 100 bases:
>100_bases ACGAGAAAGATCCATACCAACCCAATAGCAAATGTGGTCTATGGAACCTCGAAGCTTCACACACCCAGTCGTTATCACCA TCAATCTGGTGTATTAAAAA
Downstream 100 bases:
>100_bases AGGGATCTCAAATACCACTTTTAAGGCAATTCCCCTAACCAGCCGAGCGCGAAGATCAACTCATCATCAACACCTTCATG ATGACTGTCTTACCAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MSYFTWKEAGLTSDCASLEAMASRFEEAASLMRRMAQEGFRLEQNMKKQRITHPDPGVFEAWGFISEEPAFRQLTLIPDL KV
Sequences:
>Translated_82_residues MSYFTWKEAGLTSDCASLEAMASRFEEAASLMRRMAQEGFRLEQNMKKQRITHPDPGVFEAWGFISEEPAFRQLTLIPDL KV >Mature_81_residues SYFTWKEAGLTSDCASLEAMASRFEEAASLMRRMAQEGFRLEQNMKKQRITHPDPGVFEAWGFISEEPAFRQLTLIPDLK V
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9430; Mature: 9299
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYFTWKEAGLTSDCASLEAMASRFEEAASLMRRMAQEGFRLEQNMKKQRITHPDPGVFE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH AWGFISEEPAFRQLTLIPDLKV HHCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure SYFTWKEAGLTSDCASLEAMASRFEEAASLMRRMAQEGFRLEQNMKKQRITHPDPGVFE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH AWGFISEEPAFRQLTLIPDLKV HHCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA