| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is purT [H]
Identifier: 33864531
GI number: 33864531
Start: 2397156
End: 2398322
Strand: Direct
Name: purT [H]
Synonym: PMT2267
Alternate gene names: 33864531
Gene position: 2397156-2398322 (Clockwise)
Preceding gene: 33864530
Following gene: 33864536
Centisome position: 99.43
GC content: 50.81
Gene sequence:
>1167_bases ATGACTGTCTTACCAAAAACCTTGCTGTTACTTGGCAGCGGAGAACTCGGCAAAGAAATAACAATCGCCGCTCAACGGTT GGGCTGCCATGTCATCGCCTGTGATCGATACTCCGGGGCCCCGGCCATGCAAGTAGCAGACCAAGCAGAGGTTCTGGACA TGAACAATTCAGAAGCCCTCACAGCCATCATCAGGCATCACCAACCGGATGTAGTCATCCCAGAGATCGAAGCATTGGCA GTCAATGCACTAGCAGAGCTTGAAAACGAAGGAATCACAGTGATCCCTACGGCCCGAGCCACAGCCATAACGATGAATCG CGATCGAATCAGAGATCTCGCCAGCGCTGAATTGGCTCTACTGACCCCAAAATTTGCTTATGCCGGCAGTGCCGAAGAAC TCAAACATGCAGCTGAGCCCCTGGGCTGGCCAGTGGTGGTCAAACCAGTCATGAGCTCCTCCGGCAAAGGCCAAAGTGTG GTTAGCAATCCTGAAGGCCTACGGCAAGCCTGGCAAGCCGCTATGGCAGGGTCCCGGGGTAACTCACCGCGAGTCATCGT GGAAGAGTTCCTTCACTTTGATCTCGAAATTACCTTGCTCACAATTCGCCAAGAGGATGGCTCCACCCTCTTCTGCGAAC CAATCGGCCATGAACAAATTGGAGGAGATTATCAATGCAGCTGGCAACCAGCAGAACTCTCTACTGAACAACTCAAGCAA GCCCAATCAATGGCTCTGACTATTACCAAAAATCTTGGTGGTGTGGGATTGTTCGGGGTGGAGTTCTTTCTTTGTGGCAA TGAAGTGATTTTCTCGGAACTATCACCAAGACCACATGACACCGGACTTGTCACCCTTATCAGCCAAAACCTTAGTGAAT TCGAACTACACCTGCGCGCAGTGCTGAACTTACCTATTCCTACTATTCAAACTGCAGATGCAGCAGCAAGCAGGGTAATC CTGGCAAAAGACAATCTCTCATCCATTTCCTACAAAGGAGTGGAGAAAGCCCTCTCAGAAATTGACACCCAGATATTGCT GTTCGGCAAACCCAATGCTCGACCAGGGCGTCGCATGGGGGTTGCTTTAGCAAAAGGCAAGTCTATGGAAGCAGTTCGCT CTAAAGCTGATCGAGCCGCCGCATCCATCCAGGTAATAAAAGGGTAA
Upstream 100 bases:
>100_bases TCCCTGATCTCAAAGTGTAAAGGGATCTCAAATACCACTTTTAAGGCAATTCCCCTAACCAGCCGAGCGCGAAGATCAAC TCATCATCAACACCTTCATG
Downstream 100 bases:
>100_bases GGGTGTCAGTTAAGACTTTAAGAAAAATCGATAGTGATTTAAGCCATCTAAAAGTCCAAACAAATGCGGGTTGTTAGCAA AAAACACTCGTTGCTGATGT
Product: phosphoribosylglycinamide formyltransferase 2
Products: 5'-Phosphoribosyl-N-Formylglycinamide; Pyrophosphate; acetylphosphate; ADP [C]
Alternate protein names: GART 2; 5'-phosphoribosylglycinamide transformylase 2; Formate-dependent GAR transformylase; GAR transformylase 2 [H]
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTVLPKTLLLLGSGELGKEITIAAQRLGCHVIACDRYSGAPAMQVADQAEVLDMNNSEALTAIIRHHQPDVVIPEIEALA VNALAELENEGITVIPTARATAITMNRDRIRDLASAELALLTPKFAYAGSAEELKHAAEPLGWPVVVKPVMSSSGKGQSV VSNPEGLRQAWQAAMAGSRGNSPRVIVEEFLHFDLEITLLTIRQEDGSTLFCEPIGHEQIGGDYQCSWQPAELSTEQLKQ AQSMALTITKNLGGVGLFGVEFFLCGNEVIFSELSPRPHDTGLVTLISQNLSEFELHLRAVLNLPIPTIQTADAAASRVI LAKDNLSSISYKGVEKALSEIDTQILLFGKPNARPGRRMGVALAKGKSMEAVRSKADRAAASIQVIKG
Sequences:
>Translated_388_residues MTVLPKTLLLLGSGELGKEITIAAQRLGCHVIACDRYSGAPAMQVADQAEVLDMNNSEALTAIIRHHQPDVVIPEIEALA VNALAELENEGITVIPTARATAITMNRDRIRDLASAELALLTPKFAYAGSAEELKHAAEPLGWPVVVKPVMSSSGKGQSV VSNPEGLRQAWQAAMAGSRGNSPRVIVEEFLHFDLEITLLTIRQEDGSTLFCEPIGHEQIGGDYQCSWQPAELSTEQLKQ AQSMALTITKNLGGVGLFGVEFFLCGNEVIFSELSPRPHDTGLVTLISQNLSEFELHLRAVLNLPIPTIQTADAAASRVI LAKDNLSSISYKGVEKALSEIDTQILLFGKPNARPGRRMGVALAKGKSMEAVRSKADRAAASIQVIKG >Mature_387_residues TVLPKTLLLLGSGELGKEITIAAQRLGCHVIACDRYSGAPAMQVADQAEVLDMNNSEALTAIIRHHQPDVVIPEIEALAV NALAELENEGITVIPTARATAITMNRDRIRDLASAELALLTPKFAYAGSAEELKHAAEPLGWPVVVKPVMSSSGKGQSVV SNPEGLRQAWQAAMAGSRGNSPRVIVEEFLHFDLEITLLTIRQEDGSTLFCEPIGHEQIGGDYQCSWQPAELSTEQLKQA QSMALTITKNLGGVGLFGVEFFLCGNEVIFSELSPRPHDTGLVTLISQNLSEFELHLRAVLNLPIPTIQTADAAASRVIL AKDNLSSISYKGVEKALSEIDTQILLFGKPNARPGRRMGVALAKGKSMEAVRSKADRAAASIQVIKG
Specific function: Catalyzes two reactions:the first one is the production of beta-formyl glycinamide ribonucleotide (GAR) from formate, ATP and beta GAR; the second, a side reaction, is the production of acetyl phosphate and ADP from acetate and ATP [H]
COG id: COG0027
COG function: function code F; Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1788155, Length=378, Percent_Identity=50.5291005291005, Blast_Score=375, Evalue=1e-105, Organism=Escherichia coli, GI1786733, Length=176, Percent_Identity=30.6818181818182, Blast_Score=72, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6324702, Length=367, Percent_Identity=26.7029972752044, Blast_Score=113, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR005862 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: 2.1.2.- [C]
Molecular weight: Translated: 41629; Mature: 41498
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLPKTLLLLGSGELGKEITIAAQRLGCHVIACDRYSGAPAMQVADQAEVLDMNNSEAL CCCCCCEEEEECCCCCCCEEEEEEHHHCEEEEEECCCCCCCHHHHCCCHHEECCCCCHHH TAIIRHHQPDVVIPEIEALAVNALAELENEGITVIPTARATAITMNRDRIRDLASAELAL HHHHHHCCCCEECCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEECHHHHHHHHHCCEEE LTPKFAYAGSAEELKHAAEPLGWPVVVKPVMSSSGKGQSVVSNPEGLRQAWQAAMAGSRG ECCCHHCCCCHHHHHHHHCCCCCCEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC NSPRVIVEEFLHFDLEITLLTIRQEDGSTLFCEPIGHEQIGGDYQCSWQPAELSTEQLKQ CCCHHHHHHHHCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHH AQSMALTITKNLGGVGLFGVEFFLCGNEVIFSELSPRPHDTGLVTLISQNLSEFELHLRA HHHEEEEEECCCCCEEEEEEEEEEECCHHEEHHCCCCCCCCCEEEEECCCHHHHHHHHHH VLNLPIPTIQTADAAASRVILAKDNLSSISYKGVEKALSEIDTQILLFGKPNARPGRRMG HHCCCCCCCCCCCHHHCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHE VALAKGKSMEAVRSKADRAAASIQVIKG EEEECCCCHHHHHHHHHHHHHEEEEECC >Mature Secondary Structure TVLPKTLLLLGSGELGKEITIAAQRLGCHVIACDRYSGAPAMQVADQAEVLDMNNSEAL CCCCCEEEEECCCCCCCEEEEEEHHHCEEEEEECCCCCCCHHHHCCCHHEECCCCCHHH TAIIRHHQPDVVIPEIEALAVNALAELENEGITVIPTARATAITMNRDRIRDLASAELAL HHHHHHCCCCEECCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEECHHHHHHHHHCCEEE LTPKFAYAGSAEELKHAAEPLGWPVVVKPVMSSSGKGQSVVSNPEGLRQAWQAAMAGSRG ECCCHHCCCCHHHHHHHHCCCCCCEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC NSPRVIVEEFLHFDLEITLLTIRQEDGSTLFCEPIGHEQIGGDYQCSWQPAELSTEQLKQ CCCHHHHHHHHCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHH AQSMALTITKNLGGVGLFGVEFFLCGNEVIFSELSPRPHDTGLVTLISQNLSEFELHLRA HHHEEEEEECCCCCEEEEEEEEEEECCHHEEHHCCCCCCCCCEEEEECCCHHHHHHHHHH VLNLPIPTIQTADAAASRVILAKDNLSSISYKGVEKALSEIDTQILLFGKPNARPGRRMG HHCCCCCCCCCCCHHHCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHE VALAKGKSMEAVRSKADRAAASIQVIKG EEEECCCCHHHHHHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Formate; 5'-Phospho-Ribosylglycinamide; acetate; ATP [C]
Specific reaction: Formate + ATP + 5'-Phospho-Ribosylglycinamide = 5'-Phosphoribosyl-N-Formylglycinamide + ADP + Pyrophosphate. acetate + ATP = acetylphosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA