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The map label for this gene is 33864516

Identifier: 33864516

GI number: 33864516

Start: 2383289

End: 2384602

Strand: Reverse

Name: 33864516

Synonym: PMT2252

Alternate gene names: NA

Gene position: 2384602-2383289 (Counterclockwise)

Preceding gene: 33864517

Following gene: 33864512

Centisome position: 98.91

GC content: 53.35

Gene sequence:

>1314_bases
ATGGCTCGATGTCGCCCTGCTGCTGCGACCTCCATGGGTTGGTTGGTTTTCCAGTTGGGGCTTTTTTTGTTGCCTTCCAG
TGCATTGTTGGCAGGTTTGTTGCTGCTTACGGCTCTGGTGCTTGGTAGTTGTCAGCGACAGCAACCGTTTTGGCGCGATC
CTTGGAATTGGCCTTTGCTGATTGCTGCCCTATTGATGCTGTTTGGTTGCTTTCCGGCCTATTCGGGTGGACATGCTTGG
GTTGGTCTGGGGAATTGGTTGCCTTTCTTTTGGGCTTTTTGGGGTTTTCAGCCTTATTTAGTTAGTGATGAAGCCCGACG
ACGTTGTGCTCTTTGGCTTGTCGCTGGCACTTTGCCTGTGGTGATTACCGGTCTCGGGCAGCTCTGGTGGGGATGGCAGG
GGCCATGGCAATTGTTCGGTGGCTTAATCGTCTGGTTCATGGCTTCAGGGGGGGAGCCTACTGGCCGTTTATCTGGTCTA
TTTGATTACGCAAATATTGCTGGAGCCTGGTTGGCCATGGTTTGGCCATTCTGTTTGGCAGCTCTGCTTCAGCCTGCCCT
CAGTCGTTTTCAACGCAGTGTGGCTTTGGGGGTCGCTATTGCTGTTGTGGCTGCATTGGTTCTCACTGACTCAAGAAATG
CTTGGGGAGGGTTGATGTTGGCGATTCCCTTTGTTTTTGGGCCTGCCAGGTGGCCCTGGTTGTTGCCGTTGATGGTGTTA
GCGCTGTTGCCAGTGACCCTTGCAGCATTACCAGGCAGTCCTTCAGGTTTGCAGCAGTGGGCACGCACGTTTGTGCCTGA
GGGTATTTGGGCGCGTCTTAATGACATGCGCTATTTCCAGGATCGTGAGTTGATGTCAACTCGCATGAGCCAGTGGGGGG
TGGCTCTGCAGTTCATTGATTCTCGTCCTTGGCTGGGTTGGGGGGCTGCTGCTTTTTCAGTGCTTTATCCGCTGCGGACT
GGTCAGTGGCATGGCCATGCCCATAACCTTCCTCTTGAACTTGCTGTTAGCCATGGGATACCCGTGGCTCTGCTAGTGGT
GGGGACTGTGTTGGCTCTCTTGATCACAGTCTTGCGACGTGGTGTGTTGACTGGTGGAGTCTTGATAAGCCGAGGTTTGA
GTAGCACGGTCTTTGACCGTGCTTGGTGGACGGCAAGTTTGATCCTGGTGGTGATGCACGCTACTGATATGCCTTTCTTT
GACAGTCGGCTCAACATTGCCGGCTGGATTCTTTTGGCTGGATTGCGTTGCATCATTCTTCCCCAGCAGGCACTCCAGCA
TGCTCGTTTAGGGCTTGATAATGATGTTGGATGA

Upstream 100 bases:

>100_bases
AACGTCTCGCTTTGGCAAGGGCCTTGAGATTGCATCTTTGTCGCCAGGTGATGGTCTATCGCGGTAGAACCGCTGTTTTT
GCATGACGGTGTTGGCTTGG

Downstream 100 bases:

>100_bases
GTTGCTTTTGGTTGAGGGGCCCTTCTAGATGGGTCCAGGGCAGTGTTCGTGATGGCTCCCATGATTCATGCACCACTTCT
TCCCAGGCGGGTGGGCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MARCRPAAATSMGWLVFQLGLFLLPSSALLAGLLLLTALVLGSCQRQQPFWRDPWNWPLLIAALLMLFGCFPAYSGGHAW
VGLGNWLPFFWAFWGFQPYLVSDEARRRCALWLVAGTLPVVITGLGQLWWGWQGPWQLFGGLIVWFMASGGEPTGRLSGL
FDYANIAGAWLAMVWPFCLAALLQPALSRFQRSVALGVAIAVVAALVLTDSRNAWGGLMLAIPFVFGPARWPWLLPLMVL
ALLPVTLAALPGSPSGLQQWARTFVPEGIWARLNDMRYFQDRELMSTRMSQWGVALQFIDSRPWLGWGAAAFSVLYPLRT
GQWHGHAHNLPLELAVSHGIPVALLVVGTVLALLITVLRRGVLTGGVLISRGLSSTVFDRAWWTASLILVVMHATDMPFF
DSRLNIAGWILLAGLRCIILPQQALQHARLGLDNDVG

Sequences:

>Translated_437_residues
MARCRPAAATSMGWLVFQLGLFLLPSSALLAGLLLLTALVLGSCQRQQPFWRDPWNWPLLIAALLMLFGCFPAYSGGHAW
VGLGNWLPFFWAFWGFQPYLVSDEARRRCALWLVAGTLPVVITGLGQLWWGWQGPWQLFGGLIVWFMASGGEPTGRLSGL
FDYANIAGAWLAMVWPFCLAALLQPALSRFQRSVALGVAIAVVAALVLTDSRNAWGGLMLAIPFVFGPARWPWLLPLMVL
ALLPVTLAALPGSPSGLQQWARTFVPEGIWARLNDMRYFQDRELMSTRMSQWGVALQFIDSRPWLGWGAAAFSVLYPLRT
GQWHGHAHNLPLELAVSHGIPVALLVVGTVLALLITVLRRGVLTGGVLISRGLSSTVFDRAWWTASLILVVMHATDMPFF
DSRLNIAGWILLAGLRCIILPQQALQHARLGLDNDVG
>Mature_436_residues
ARCRPAAATSMGWLVFQLGLFLLPSSALLAGLLLLTALVLGSCQRQQPFWRDPWNWPLLIAALLMLFGCFPAYSGGHAWV
GLGNWLPFFWAFWGFQPYLVSDEARRRCALWLVAGTLPVVITGLGQLWWGWQGPWQLFGGLIVWFMASGGEPTGRLSGLF
DYANIAGAWLAMVWPFCLAALLQPALSRFQRSVALGVAIAVVAALVLTDSRNAWGGLMLAIPFVFGPARWPWLLPLMVLA
LLPVTLAALPGSPSGLQQWARTFVPEGIWARLNDMRYFQDRELMSTRMSQWGVALQFIDSRPWLGWGAAAFSVLYPLRTG
QWHGHAHNLPLELAVSHGIPVALLVVGTVLALLITVLRRGVLTGGVLISRGLSSTVFDRAWWTASLILVVMHATDMPFFD
SRLNIAGWILLAGLRCIILPQQALQHARLGLDNDVG

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48095; Mature: 47964

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARCRPAAATSMGWLVFQLGLFLLPSSALLAGLLLLTALVLGSCQRQQPFWRDPWNWPLL
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCHHH
IAALLMLFGCFPAYSGGHAWVGLGNWLPFFWAFWGFQPYLVSDEARRRCALWLVAGTLPV
HHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHH
VITGLGQLWWGWQGPWQLFGGLIVWFMASGGEPTGRLSGLFDYANIAGAWLAMVWPFCLA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLQPALSRFQRSVALGVAIAVVAALVLTDSRNAWGGLMLAIPFVFGPARWPWLLPLMVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
ALLPVTLAALPGSPSGLQQWARTFVPEGIWARLNDMRYFQDRELMSTRMSQWGVALQFID
HHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
SRPWLGWGAAAFSVLYPLRTGQWHGHAHNLPLELAVSHGIPVALLVVGTVLALLITVLRR
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
GVLTGGVLISRGLSSTVFDRAWWTASLILVVMHATDMPFFDSRLNIAGWILLAGLRCIIL
HHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEE
PQQALQHARLGLDNDVG
CHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ARCRPAAATSMGWLVFQLGLFLLPSSALLAGLLLLTALVLGSCQRQQPFWRDPWNWPLL
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCHHH
IAALLMLFGCFPAYSGGHAWVGLGNWLPFFWAFWGFQPYLVSDEARRRCALWLVAGTLPV
HHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHH
VITGLGQLWWGWQGPWQLFGGLIVWFMASGGEPTGRLSGLFDYANIAGAWLAMVWPFCLA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLQPALSRFQRSVALGVAIAVVAALVLTDSRNAWGGLMLAIPFVFGPARWPWLLPLMVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
ALLPVTLAALPGSPSGLQQWARTFVPEGIWARLNDMRYFQDRELMSTRMSQWGVALQFID
HHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
SRPWLGWGAAAFSVLYPLRTGQWHGHAHNLPLELAVSHGIPVALLVVGTVLALLITVLRR
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
GVLTGGVLISRGLSSTVFDRAWWTASLILVVMHATDMPFFDSRLNIAGWILLAGLRCIIL
HHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEE
PQQALQHARLGLDNDVG
CHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA