| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is trpD [H]
Identifier: 33864506
GI number: 33864506
Start: 2369106
End: 2370212
Strand: Direct
Name: trpD [H]
Synonym: PMT2242
Alternate gene names: 33864506
Gene position: 2369106-2370212 (Clockwise)
Preceding gene: 33864505
Following gene: 33864508
Centisome position: 98.27
GC content: 54.02
Gene sequence:
>1107_bases ATGACTACAGAAAGATCCAATGAGTTCCGGCAATCAATCGTGACCACATGCCCCGAATTATCCGGCCGTGAACGCTTCAA AGCCCACCTCAGGAAGGTGGGAAGTGGAGAGCAAACCAGTCGTGGCATGAGCCGTGAAGAATCGGCTGATGCCTTGCATC TCATCCTTACAGCCCAAGCCAGCCCTGCTCAAATTGGCGCCTTCCTCATCGCCCATCGCATTCGTCGACCCGAGCCCCAG GAACTCGCCGGCATGCTCGATACATACAGAGTGCTTGGACCCAAACTGAAATCAGCCAATGGCCAGAAACGACCCATTTG CTTTGGCATGCCATTCGACGGCCGCAAGCGAACAGCCCCGATTTATCCGCTCACAGCACTGGTCCTACTCAACGCTGGTC AACCCGTCGTCTTGCAAGGGGGGCAGCGTATGCCAATCAAATATGGCGTCACCACAGAAGAGTTATTCAAAGCCTTAGGG CTACAACTCCAAGGCCTATCAATAGCAAACCTAGAAGCTGGCTTTCAACAACATGGTCTGGCACTGATTTACCAGCCAGA TCACTTCCCGCTAGCCGAAAGCTTGATCAGTTATCGCGACGACATCGGCAAGCGACCGCCTGTGGCCAGTTTGGAGCTGC TTTGGACAGCACATCAAGGAAAGCATTTGCTCGTCAGCGGCTTCGTGCATCCCCCCACAGAAGAGCGGGCCTGGAAAGCC CTTGCGCTAGCAGGTGAAACAAATCTCGTGACTGTGAAAGGGCTCGAAGGAAGCACAGACCTTCCCATCAGTCGAGCTTG CATCACATCCCGAGTTCAAAATGGCAAGCCAGAACGACTCATCCTCCACCCCCGTAACCATGGCTGCTTTAGCCAAGACG TTGAGTGGAGCAACCTGACGGAGTGGAGCGAGCAGGCAATGGAAGCTCTGCACAATCGCGGGCCATTAAGTCAGCCCCTC CTCTGGAATGCTGGTACCTACCTATGGTTAGCTGGCCTAGCCGACAACCTCGATGAAGGTATCGCTCATGCTGAAAAGTG TCTGCAATCAGGCTTAGCCCAAACCACGCTTGAGCAGCTCATTGCTTGGAGAGAAACCATCATTTGA
Upstream 100 bases:
>100_bases TTTATCGTTGAAGTGATTCCTAAAGCCCAACAGAGCCAATTAAACCTATGCCAAGCAGACATGTCACAAGGATGTCTTAA TCGCTACTCCACGCAGCTAC
Downstream 100 bases:
>100_bases AGCGAGCCTGTAGGTTTTTCGCCATGCGATAACGATCGAAACTCACACCTCCGATCTGAATCACTTCCTTAGACATTTCA ATCCAGCCCCACTTCAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MTTERSNEFRQSIVTTCPELSGRERFKAHLRKVGSGEQTSRGMSREESADALHLILTAQASPAQIGAFLIAHRIRRPEPQ ELAGMLDTYRVLGPKLKSANGQKRPICFGMPFDGRKRTAPIYPLTALVLLNAGQPVVLQGGQRMPIKYGVTTEELFKALG LQLQGLSIANLEAGFQQHGLALIYQPDHFPLAESLISYRDDIGKRPPVASLELLWTAHQGKHLLVSGFVHPPTEERAWKA LALAGETNLVTVKGLEGSTDLPISRACITSRVQNGKPERLILHPRNHGCFSQDVEWSNLTEWSEQAMEALHNRGPLSQPL LWNAGTYLWLAGLADNLDEGIAHAEKCLQSGLAQTTLEQLIAWRETII
Sequences:
>Translated_368_residues MTTERSNEFRQSIVTTCPELSGRERFKAHLRKVGSGEQTSRGMSREESADALHLILTAQASPAQIGAFLIAHRIRRPEPQ ELAGMLDTYRVLGPKLKSANGQKRPICFGMPFDGRKRTAPIYPLTALVLLNAGQPVVLQGGQRMPIKYGVTTEELFKALG LQLQGLSIANLEAGFQQHGLALIYQPDHFPLAESLISYRDDIGKRPPVASLELLWTAHQGKHLLVSGFVHPPTEERAWKA LALAGETNLVTVKGLEGSTDLPISRACITSRVQNGKPERLILHPRNHGCFSQDVEWSNLTEWSEQAMEALHNRGPLSQPL LWNAGTYLWLAGLADNLDEGIAHAEKCLQSGLAQTTLEQLIAWRETII >Mature_367_residues TTERSNEFRQSIVTTCPELSGRERFKAHLRKVGSGEQTSRGMSREESADALHLILTAQASPAQIGAFLIAHRIRRPEPQE LAGMLDTYRVLGPKLKSANGQKRPICFGMPFDGRKRTAPIYPLTALVLLNAGQPVVLQGGQRMPIKYGVTTEELFKALGL QLQGLSIANLEAGFQQHGLALIYQPDHFPLAESLISYRDDIGKRPPVASLELLWTAHQGKHLLVSGFVHPPTEERAWKAL ALAGETNLVTVKGLEGSTDLPISRACITSRVQNGKPERLILHPRNHGCFSQDVEWSNLTEWSEQAMEALHNRGPLSQPLL WNAGTYLWLAGLADNLDEGIAHAEKCLQSGLAQTTLEQLIAWRETII
Specific function: Unknown
COG id: COG0547
COG function: function code E; Anthranilate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate phosphoribosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005940 - InterPro: IPR000312 - InterPro: IPR017459 - InterPro: IPR020072 [H]
Pfam domain/function: PF02885 Glycos_trans_3N; PF00591 Glycos_transf_3 [H]
EC number: =2.4.2.18 [H]
Molecular weight: Translated: 40633; Mature: 40502
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTERSNEFRQSIVTTCPELSGRERFKAHLRKVGSGEQTSRGMSREESADALHLILTAQA CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCCCCHHCCCEEEEEEECCC SPAQIGAFLIAHRIRRPEPQELAGMLDTYRVLGPKLKSANGQKRPICFGMPFDGRKRTAP CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCCCCCCCCCC IYPLTALVLLNAGQPVVLQGGQRMPIKYGVTTEELFKALGLQLQGLSIANLEAGFQQHGL CHHHHHHHHHCCCCCEEEECCCCCCEEECCCHHHHHHHHCCEECCCEEEHHHHHHHHCCE ALIYQPDHFPLAESLISYRDDIGKRPPVASLELLWTAHQGKHLLVSGFVHPPTEERAWKA EEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHH LALAGETNLVTVKGLEGSTDLPISRACITSRVQNGKPERLILHPRNHGCFSQDVEWSNLT HEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHH EWSEQAMEALHNRGPLSQPLLWNAGTYLWLAGLADNLDEGIAHAEKCLQSGLAQTTLEQL HHHHHHHHHHHCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH IAWRETII HHHHHHCC >Mature Secondary Structure TTERSNEFRQSIVTTCPELSGRERFKAHLRKVGSGEQTSRGMSREESADALHLILTAQA CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCCCCHHCCCEEEEEEECCC SPAQIGAFLIAHRIRRPEPQELAGMLDTYRVLGPKLKSANGQKRPICFGMPFDGRKRTAP CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEECCCCCCCCCCC IYPLTALVLLNAGQPVVLQGGQRMPIKYGVTTEELFKALGLQLQGLSIANLEAGFQQHGL CHHHHHHHHHCCCCCEEEECCCCCCEEECCCHHHHHHHHCCEECCCEEEHHHHHHHHCCE ALIYQPDHFPLAESLISYRDDIGKRPPVASLELLWTAHQGKHLLVSGFVHPPTEERAWKA EEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHH LALAGETNLVTVKGLEGSTDLPISRACITSRVQNGKPERLILHPRNHGCFSQDVEWSNLT HEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHH EWSEQAMEALHNRGPLSQPLLWNAGTYLWLAGLADNLDEGIAHAEKCLQSGLAQTTLEQL HHHHHHHHHHHCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH IAWRETII HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA