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The map label for this gene is 33864445

Identifier: 33864445

GI number: 33864445

Start: 2307577

End: 2308098

Strand: Reverse

Name: 33864445

Synonym: PMT2181

Alternate gene names: NA

Gene position: 2308098-2307577 (Counterclockwise)

Preceding gene: 33864446

Following gene: 33864437

Centisome position: 95.74

GC content: 57.85

Gene sequence:

>522_bases
ATGGATACACGTCGTCAACGTCGCCAAAGGTCCAGGGATCCCTTGGATCGTCGTTTGGATCAGTGGCTTGAGACAGGTCG
TCAGTTGGTTGATGGTGTGGCCGGCACCCGCCCTGGACAGCGTGGATCTGGTCGTACAGACCGTCGTTCCGCTGCGAGCT
TGGGAACGGTTGGTCGCTGGGTGGGTGACAAGCTTGAATGGTTGTTGGAAGAGGACGAGGACGATGGTTGGCTGGAGCCT
TGGCAGTCTGAGCCTCAGTCCACTGAAATGCGAGTGAAGCGACCACTGGAAGCGATCTCTCGCCGTGTTCCCCCTTTGAT
TCAACCTGCGTCTTCTCGCAGTGAGGTTGTGCCTCATGAGGATGATTGGCCCGATGAGTCCACCTTCCAGGTTGATCGTT
GGCAGCGTCGCCCATCAGAGCGGCTTAATCCTGAGGCCGCTTCAAACCGAAGCGCATCAGAATCATTGAAGCGACCGCTG
GAGCGGAGACCTTTGCCGCGTTCCAGTCGTCGGCGAGATTGA

Upstream 100 bases:

>100_bases
CATGTTTTTCTGGGTGCTTCAGGTCAGTGGGGTCTCGATTGCCCTAATCGGTTGGCAACGGGAGCAGTGGTTGCACCGGC
GGCGCCGGTAACGTCGATGC

Downstream 100 bases:

>100_bases
GCCTGCGCGATTCAATCAGGCTGCAGCGCTCAAAGATGCTTGATGTGGTTTGTGCGCTACGCGAAAATGGCAGCCTCGCA
GTGCGAGTTGATCATTGACG

Product: viral RNA helicase

Products: NA

Alternate protein names: RNA Helicase

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MDTRRQRRQRSRDPLDRRLDQWLETGRQLVDGVAGTRPGQRGSGRTDRRSAASLGTVGRWVGDKLEWLLEEDEDDGWLEP
WQSEPQSTEMRVKRPLEAISRRVPPLIQPASSRSEVVPHEDDWPDESTFQVDRWQRRPSERLNPEAASNRSASESLKRPL
ERRPLPRSSRRRD

Sequences:

>Translated_173_residues
MDTRRQRRQRSRDPLDRRLDQWLETGRQLVDGVAGTRPGQRGSGRTDRRSAASLGTVGRWVGDKLEWLLEEDEDDGWLEP
WQSEPQSTEMRVKRPLEAISRRVPPLIQPASSRSEVVPHEDDWPDESTFQVDRWQRRPSERLNPEAASNRSASESLKRPL
ERRPLPRSSRRRD
>Mature_173_residues
MDTRRQRRQRSRDPLDRRLDQWLETGRQLVDGVAGTRPGQRGSGRTDRRSAASLGTVGRWVGDKLEWLLEEDEDDGWLEP
WQSEPQSTEMRVKRPLEAISRRVPPLIQPASSRSEVVPHEDDWPDESTFQVDRWQRRPSERLNPEAASNRSASESLKRPL
ERRPLPRSSRRRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20240; Mature: 20240

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRRQRRQRSRDPLDRRLDQWLETGRQLVDGVAGTRPGQRGSGRTDRRSAASLGTVGRW
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
VGDKLEWLLEEDEDDGWLEPWQSEPQSTEMRVKRPLEAISRRVPPLIQPASSRSEVVPHE
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
DDWPDESTFQVDRWQRRPSERLNPEAASNRSASESLKRPLERRPLPRSSRRRD
CCCCCCCCCHHHHHHHCCHHHCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDTRRQRRQRSRDPLDRRLDQWLETGRQLVDGVAGTRPGQRGSGRTDRRSAASLGTVGRW
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
VGDKLEWLLEEDEDDGWLEPWQSEPQSTEMRVKRPLEAISRRVPPLIQPASSRSEVVPHE
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
DDWPDESTFQVDRWQRRPSERLNPEAASNRSASESLKRPLERRPLPRSSRRRD
CCCCCCCCCHHHHHHHCCHHHCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA