| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864333
Identifier: 33864333
GI number: 33864333
Start: 2174911
End: 2175648
Strand: Direct
Name: 33864333
Synonym: PMT2068
Alternate gene names: NA
Gene position: 2174911-2175648 (Clockwise)
Preceding gene: 33864332
Following gene: 33864336
Centisome position: 90.21
GC content: 58.81
Gene sequence:
>738_bases ATGCCTTCCCTCTTCAAGGTTCTGAGCACCCGTAGCCTTTCTGCAGCTTCAGCTGTGGGTTTAGTACTGTCCTCAGCCTC CTCGGCCATTGCCGGCGGAGTCACGATTACGAGTTACGGCCACAGTGCTCTACTGATCCAAGGCGGTGGGCAATCGGTGT TGCTCAACCCATTCAAGGCCGTGGGCTGCGCTGCAGGCCTGCGCGAGCCCCGGGTGAATGCCACTGTGATCCTTGCCAGC TCTGAGCTTGCTGATGAAGGAGCTCAAGTCGCTAGTGGTCGCTTCCTCGTGCAACCAGGTTCATACCGCATTGGCGGCTT AAACCTAGAGGGATTTGCGGCTCCCCATGACCGCCTGGGCGGTCGCCGTTTCGGCCAAGCCACCCTCTGGCGCTGGCAAC AAGGCGGCCTGCAATTTGCTCACCTTGGCGGCAGCGCTGCCTCTTTATCGGGAGAAGACAAAGTTCTGCTTGGACGTCCC GACGTCTTGATCATCGGCGTAGGGGGTGGCGCCAAGGTCTATGACGGCGCTGAAGCAGCACAAGTCGTCAATGCACTCAA TCCACGCCGAGTCATCCCAGTGCAATACGTGAGTGGTGCAGCGCCAAGCGACTGTGATCAAACAGGGGTGCAACCATTCC TTGATGCGATGGCAGGTACACCGGTCAAGCAAACAGGAACGACCATCAGCCTGCCGAGCGATCTGGGTGATGGACCCGTC ATTGAGGTGATGCGCTAA
Upstream 100 bases:
>100_bases TGCTCACAGAAGCAGGCCATCAACTGCTTACCAACTTTTTGCGTCTGACTGAAGCCAGCGAAAAGCACTGCTAACTTCCA AAACACTCCCGCTTCCACTC
Downstream 100 bases:
>100_bases CAGCGCATCCATAGCCTGAGTGAGTCGATCAGCATGTCTTGCCGATCACTCAGGCTGCAAGAGACTCAACAGTGGCAAAG GCTTGCCAAAATTGCTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily Hydrolase; Hydrolase Metallo-Beta-Lactamase Family Protein; Zn-Dependent Hydrolase Of Beta-Lactamase Fold; Zinc-Dependent Hydrolase; Zn-Dependent Hydrolase Of Beta-Lactamase Fold Protein; Zn-Dependent Hydrolases Of Beta-Lactamase Fold; Inactivated Zn-Dependent Hydrolase Of Beta-Lactamase Fold
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MPSLFKVLSTRSLSAASAVGLVLSSASSAIAGGVTITSYGHSALLIQGGGQSVLLNPFKAVGCAAGLREPRVNATVILAS SELADEGAQVASGRFLVQPGSYRIGGLNLEGFAAPHDRLGGRRFGQATLWRWQQGGLQFAHLGGSAASLSGEDKVLLGRP DVLIIGVGGGAKVYDGAEAAQVVNALNPRRVIPVQYVSGAAPSDCDQTGVQPFLDAMAGTPVKQTGTTISLPSDLGDGPV IEVMR
Sequences:
>Translated_245_residues MPSLFKVLSTRSLSAASAVGLVLSSASSAIAGGVTITSYGHSALLIQGGGQSVLLNPFKAVGCAAGLREPRVNATVILAS SELADEGAQVASGRFLVQPGSYRIGGLNLEGFAAPHDRLGGRRFGQATLWRWQQGGLQFAHLGGSAASLSGEDKVLLGRP DVLIIGVGGGAKVYDGAEAAQVVNALNPRRVIPVQYVSGAAPSDCDQTGVQPFLDAMAGTPVKQTGTTISLPSDLGDGPV IEVMR >Mature_244_residues PSLFKVLSTRSLSAASAVGLVLSSASSAIAGGVTITSYGHSALLIQGGGQSVLLNPFKAVGCAAGLREPRVNATVILASS ELADEGAQVASGRFLVQPGSYRIGGLNLEGFAAPHDRLGGRRFGQATLWRWQQGGLQFAHLGGSAASLSGEDKVLLGRPD VLIIGVGGGAKVYDGAEAAQVVNALNPRRVIPVQYVSGAAPSDCDQTGVQPFLDAMAGTPVKQTGTTISLPSDLGDGPVI EVMR
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24920; Mature: 24788
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLFKVLSTRSLSAASAVGLVLSSASSAIAGGVTITSYGHSALLIQGGGQSVLLNPFKA CCHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCEEEEECCCEEEEEECCCCEEEECCHHH VGCAAGLREPRVNATVILASSELADEGAQVASGRFLVQPGSYRIGGLNLEGFAAPHDRLG HHHHHCCCCCCCCEEEEEECCHHHHCCCHHHCCEEEECCCCEEEECCCCCCCCCCHHHCC GRRFGQATLWRWQQGGLQFAHLGGSAASLSGEDKVLLGRPDVLIIGVGGGAKVYDGAEAA CCCCCCHHHEEECCCCEEEEECCCCEECCCCCCEEEECCCCEEEEECCCCCEEECCHHHH QVVNALNPRRVIPVQYVSGAAPSDCDQTGVQPFLDAMAGTPVKQTGTTISLPSDLGDGPV HHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCE IEVMR EEECC >Mature Secondary Structure PSLFKVLSTRSLSAASAVGLVLSSASSAIAGGVTITSYGHSALLIQGGGQSVLLNPFKA CHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCEEEEECCCEEEEEECCCCEEEECCHHH VGCAAGLREPRVNATVILASSELADEGAQVASGRFLVQPGSYRIGGLNLEGFAAPHDRLG HHHHHCCCCCCCCEEEEEECCHHHHCCCHHHCCEEEECCCCEEEECCCCCCCCCCHHHCC GRRFGQATLWRWQQGGLQFAHLGGSAASLSGEDKVLLGRPDVLIIGVGGGAKVYDGAEAA CCCCCCHHHEEECCCCEEEEECCCCEECCCCCCEEEECCCCEEEEECCCCCEEECCHHHH QVVNALNPRRVIPVQYVSGAAPSDCDQTGVQPFLDAMAGTPVKQTGTTISLPSDLGDGPV HHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCE IEVMR EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA