| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864312
Identifier: 33864312
GI number: 33864312
Start: 2159222
End: 2159758
Strand: Reverse
Name: 33864312
Synonym: PMT2047
Alternate gene names: NA
Gene position: 2159758-2159222 (Counterclockwise)
Preceding gene: 33864313
Following gene: 33864309
Centisome position: 89.58
GC content: 55.31
Gene sequence:
>537_bases ATGCCCTCTGATCCAATCTGGTGGTGGGCTTTTGGAGTGCAACTGCTAGCTCTCCCTGGAGCATTGTTGCCGGTGTTACC GAGTTTGTTGTGGTTGCCACTCGGTGCTGGTTTATGGGTTTGGCATGTGGGCTGGAGTGCAGGTTGGCTCAGCCTTGGTT TGGCCTGCATTGTTTTTTTACTTGGCCTTATTGCTGATCTGTTAGCGGTAGCTCTTGCTTCTGCTCGTTTACGAGCAAGC CGCTGGGCAGTTTTGGGTGCTGGATTGGGGCTGCTGCTTGGCTTGGTGGGTCTATTGCCGGCTTTGCCTTTTGGAGGCCC ATTGCTAGGGGCTCTCTTTGGACCTTGGCTGGGTGCTGCTTTGGTGGAAACGTTGACGGCTAGGCAACCTCCTTTAGCAC TTGGATGGTTGCTTGCTGCTCGCCGTGGTGCGCTGGTCGGGCTTGCAGTGGTCGCTGGCTTATTGGTGAGCCGAGTAGCC CAATTCGTTTTGGCGCTACTCGGCATCGCTGGCTTTTTGCTGCTCAGTTGGGCTTAA
Upstream 100 bases:
>100_bases AAGCCTTTGGTGGCCAGCGAGATGGAGATCGCTGCCAATCCACGCAGCCGTAGTGCAAAGTGTCGATTCGCTCGCCGCTT GCCTCAAGCGACCACTGCCG
Downstream 100 bases:
>100_bases GCAGGCCAGTGTTGTCTGTGCTGCCGAACAACTGACGGTAGGCCGCAGTTGAGATGCAAACCATGGCAGGAACCATCACG AAGAGACCTCCATAGTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MPSDPIWWWAFGVQLLALPGALLPVLPSLLWLPLGAGLWVWHVGWSAGWLSLGLACIVFLLGLIADLLAVALASARLRAS RWAVLGAGLGLLLGLVGLLPALPFGGPLLGALFGPWLGAALVETLTARQPPLALGWLLAARRGALVGLAVVAGLLVSRVA QFVLALLGIAGFLLLSWA
Sequences:
>Translated_178_residues MPSDPIWWWAFGVQLLALPGALLPVLPSLLWLPLGAGLWVWHVGWSAGWLSLGLACIVFLLGLIADLLAVALASARLRAS RWAVLGAGLGLLLGLVGLLPALPFGGPLLGALFGPWLGAALVETLTARQPPLALGWLLAARRGALVGLAVVAGLLVSRVA QFVLALLGIAGFLLLSWA >Mature_177_residues PSDPIWWWAFGVQLLALPGALLPVLPSLLWLPLGAGLWVWHVGWSAGWLSLGLACIVFLLGLIADLLAVALASARLRASR WAVLGAGLGLLLGLVGLLPALPFGGPLLGALFGPWLGAALVETLTARQPPLALGWLLAARRGALVGLAVVAGLLVSRVAQ FVLALLGIAGFLLLSWA
Specific function: Unknown
COG id: COG2839
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18437; Mature: 18305
Theoretical pI: Translated: 12.10; Mature: 12.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSDPIWWWAFGVQLLALPGALLPVLPSLLWLPLGAGLWVWHVGWSAGWLSLGLACIVFL CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHH LGLIADLLAVALASARLRASRWAVLGAGLGLLLGLVGLLPALPFGGPLLGALFGPWLGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LVETLTARQPPLALGWLLAARRGALVGLAVVAGLLVSRVAQFVLALLGIAGFLLLSWA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSDPIWWWAFGVQLLALPGALLPVLPSLLWLPLGAGLWVWHVGWSAGWLSLGLACIVFL CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHH LGLIADLLAVALASARLRASRWAVLGAGLGLLLGLVGLLPALPFGGPLLGALFGPWLGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LVETLTARQPPLALGWLLAARRGALVGLAVVAGLLVSRVAQFVLALLGIAGFLLLSWA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA