| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33864309
Identifier: 33864309
GI number: 33864309
Start: 2156645
End: 2157193
Strand: Reverse
Name: 33864309
Synonym: PMT2044
Alternate gene names: NA
Gene position: 2157193-2156645 (Counterclockwise)
Preceding gene: 33864312
Following gene: 33864308
Centisome position: 89.48
GC content: 52.28
Gene sequence:
>549_bases ATGGTGGAAAGTTCCGTTGCTCTGTCGCGCATGCGTCGTTCTTTCAGGATCGTTGGTCTGAGCCTCACGGCCTTGTTTTT GTTATGCCTCCGCCCTTCAGAGGCTATTGAGCCTCAGGAGGTTATTGAGCAGATGAAGAAGAGTCGGCCTGCCAATTTGG TGGTGTTAATTAAGCGCCCTGATGTTGGTGGCGATTATCTCTTGGGGATGTATGCGCTCAAGACGGACAAGTTTGATCAG GATCTGCGCCGCTTCAAACTTTGGCAGGAGTGGTCATATGACCTCAACGTTCACACGGAGTCAGTGAGCTGCAGCACCGA AGAACCACTCCGGATCACCCGAGATAGCAGAGCGGTGTATGTGCGTCGTCTTAATCCAGGGGGGATTGTGAACCCAGCGA ATCGGGAGGACCATCTTGTGTGGTGGGCGGCTTGTGTCCCAGAGCTGGGCGGCACAGATCCAACCAATCTGAAAGATAAG GCTCTATCACTCGGTTATTCAACCGTGTTAGTTGAATTCCAAGAAGTTTTGGTCGGACCAGTCCGTTGA
Upstream 100 bases:
>100_bases GGCCATGGCCTTGACAACCTCGGCAGCACAGGGTGTGGTTGCCTGATAATCCAAGCAAAGGGGGGATTGTTTTAGGGATC CACTGGAAAGGCTTGGCAGC
Downstream 100 bases:
>100_bases GGTCCCTATCGCTTCAGGACTGTTGGGGCGATCGCTTCTAGATTTTTGCAGCTTGCAATCCTGTTGGCCCATGAGTGAGA CCCTTCCCCAGAATGTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MVESSVALSRMRRSFRIVGLSLTALFLLCLRPSEAIEPQEVIEQMKKSRPANLVVLIKRPDVGGDYLLGMYALKTDKFDQ DLRRFKLWQEWSYDLNVHTESVSCSTEEPLRITRDSRAVYVRRLNPGGIVNPANREDHLVWWAACVPELGGTDPTNLKDK ALSLGYSTVLVEFQEVLVGPVR
Sequences:
>Translated_182_residues MVESSVALSRMRRSFRIVGLSLTALFLLCLRPSEAIEPQEVIEQMKKSRPANLVVLIKRPDVGGDYLLGMYALKTDKFDQ DLRRFKLWQEWSYDLNVHTESVSCSTEEPLRITRDSRAVYVRRLNPGGIVNPANREDHLVWWAACVPELGGTDPTNLKDK ALSLGYSTVLVEFQEVLVGPVR >Mature_182_residues MVESSVALSRMRRSFRIVGLSLTALFLLCLRPSEAIEPQEVIEQMKKSRPANLVVLIKRPDVGGDYLLGMYALKTDKFDQ DLRRFKLWQEWSYDLNVHTESVSCSTEEPLRITRDSRAVYVRRLNPGGIVNPANREDHLVWWAACVPELGGTDPTNLKDK ALSLGYSTVLVEFQEVLVGPVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20661; Mature: 20661
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVESSVALSRMRRSFRIVGLSLTALFLLCLRPSEAIEPQEVIEQMKKSRPANLVVLIKRP CCCHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECC DVGGDYLLGMYALKTDKFDQDLRRFKLWQEWSYDLNVHTESVSCSTEEPLRITRDSRAVY CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECEECCCCCCCEEEECCCCEEE VRRLNPGGIVNPANREDHLVWWAACVPELGGTDPTNLKDKALSLGYSTVLVEFQEVLVGP EEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC VR CC >Mature Secondary Structure MVESSVALSRMRRSFRIVGLSLTALFLLCLRPSEAIEPQEVIEQMKKSRPANLVVLIKRP CCCHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECC DVGGDYLLGMYALKTDKFDQDLRRFKLWQEWSYDLNVHTESVSCSTEEPLRITRDSRAVY CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECEECCCCCCCEEEECCCCEEE VRRLNPGGIVNPANREDHLVWWAACVPELGGTDPTNLKDKALSLGYSTVLVEFQEVLVGP EEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC VR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA