| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864306
Identifier: 33864306
GI number: 33864306
Start: 2154190
End: 2154768
Strand: Reverse
Name: 33864306
Synonym: PMT2041
Alternate gene names: NA
Gene position: 2154768-2154190 (Counterclockwise)
Preceding gene: 33864307
Following gene: 33864303
Centisome position: 89.38
GC content: 43.18
Gene sequence:
>579_bases ATGTTGAAGCGTGGGTTGCTGATTGCATGCTCTTTGATGGGAATTGCAGGTTGCTCTTTTAATTCTGTGCGCCAGCATCA AGTGTTGCAACCTGAAAGATTGGACCTACAATTATTAGTCTGCAAAATAAAATCTACGTTTTTCTCTGATGTAAATCAGG ACGGACAAATTTCAGTTGGAGATCATATGACCTATGTTTTTAATGTTTCTGAGGATGCTGCTTGTGCTCAGTCGCAATCA ACCTTTTATGCTGTTGAGCAGATTGTGATGAGCCAGGCTTTGGGGCATGATCTGCAGCAGAGTTTTGTGACCCATTTTCA GGGAACTTTTAGGTTGAACAAAGGCAATCTTCAGTTGCGAGGCCTGGGTTCTCTCGGTTTAAGCGCTAGCAAGTGGAAAG CTATTAATCAATCCGGTTCTATTGATCTTGTTCTTGCCAACATCTTTCCTGAGAGCCATCGGCTTTCAGTTATTGGCGAG GGTGGTTCTTACACTGGGCTGGTGGGTACCGCATTTGTTAAGCCTGGAGATGTAGTGGCAGTTGATATTAACTTGTTTGG TCAATTCAAGCTTGATTGA
Upstream 100 bases:
>100_bases CTGCTCGCCGCGGTGCCTCCAGATGAAGACGGAAAGATGAGCGGCGCCTATTTCACCAGTTAGGGTGATCGTTGAATCCC CAAGAGCTCGTGACTTGTTG
Downstream 100 bases:
>100_bases GTTTAGTAGATATTGCCTTTCCCTGTTGCTTTTGCTAGAAGATTTAGCTGTAATTTTAAATTTTCTTGAACTCAATCAGT CGTGAAAAGTAGAATGGAGC
Product: dockerin repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MLKRGLLIACSLMGIAGCSFNSVRQHQVLQPERLDLQLLVCKIKSTFFSDVNQDGQISVGDHMTYVFNVSEDAACAQSQS TFYAVEQIVMSQALGHDLQQSFVTHFQGTFRLNKGNLQLRGLGSLGLSASKWKAINQSGSIDLVLANIFPESHRLSVIGE GGSYTGLVGTAFVKPGDVVAVDINLFGQFKLD
Sequences:
>Translated_192_residues MLKRGLLIACSLMGIAGCSFNSVRQHQVLQPERLDLQLLVCKIKSTFFSDVNQDGQISVGDHMTYVFNVSEDAACAQSQS TFYAVEQIVMSQALGHDLQQSFVTHFQGTFRLNKGNLQLRGLGSLGLSASKWKAINQSGSIDLVLANIFPESHRLSVIGE GGSYTGLVGTAFVKPGDVVAVDINLFGQFKLD >Mature_192_residues MLKRGLLIACSLMGIAGCSFNSVRQHQVLQPERLDLQLLVCKIKSTFFSDVNQDGQISVGDHMTYVFNVSEDAACAQSQS TFYAVEQIVMSQALGHDLQQSFVTHFQGTFRLNKGNLQLRGLGSLGLSASKWKAINQSGSIDLVLANIFPESHRLSVIGE GGSYTGLVGTAFVKPGDVVAVDINLFGQFKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20815; Mature: 20815
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRGLLIACSLMGIAGCSFNSVRQHQVLQPERLDLQLLVCKIKSTFFSDVNQDGQISVG CCCCCCEEEEEHHHHCCCCCCCHHHHHCCCCCCCCCEEEEEHHHHHHHHCCCCCCCEEEC DHMTYVFNVSEDAACAQSQSTFYAVEQIVMSQALGHDLQQSFVTHFQGTFRLNKGNLQLR CCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCEEEEEECCCEEEE GLGSLGLSASKWKAINQSGSIDLVLANIFPESHRLSVIGEGGSYTGLVGTAFVKPGDVVA ECCCCCCCHHHHEECCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEEEEEECCCCEEE VDINLFGQFKLD EEEEEEEEEECC >Mature Secondary Structure MLKRGLLIACSLMGIAGCSFNSVRQHQVLQPERLDLQLLVCKIKSTFFSDVNQDGQISVG CCCCCCEEEEEHHHHCCCCCCCHHHHHCCCCCCCCCEEEEEHHHHHHHHCCCCCCCEEEC DHMTYVFNVSEDAACAQSQSTFYAVEQIVMSQALGHDLQQSFVTHFQGTFRLNKGNLQLR CCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCEEEEEECCCEEEE GLGSLGLSASKWKAINQSGSIDLVLANIFPESHRLSVIGEGGSYTGLVGTAFVKPGDVVA ECCCCCCCHHHHEECCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEEEEEECCCCEEE VDINLFGQFKLD EEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA