Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is 33864298

Identifier: 33864298

GI number: 33864298

Start: 2145597

End: 2146565

Strand: Direct

Name: 33864298

Synonym: PMT2033

Alternate gene names: NA

Gene position: 2145597-2146565 (Clockwise)

Preceding gene: 33864297

Following gene: 33864299

Centisome position: 89.0

GC content: 55.01

Gene sequence:

>969_bases
ATGTCAGCTGCTGACTCTGAACCCAGTCAAGGCTGGAAACCAGCATGGAGCAGTTTCATTGCCCTGACACTCCTAGCTGT
GGCTTTAACGGCGATGCTGCAGAGGCCAGCTTCTGAGCGCCAAGTACTTGTAGCGTCGACCCACAAGCTGCTGCTGTGGC
TTCCAGTGCTCTACGGCATCGTGGTAGTCAGCTATGCAGGCCGTTATTGGCGCTGGAGGCTATTACTGGGCCGAATTGGA
ATCGGTCGACTGAGTTGGGCCGATCTGATCGGCTGGTTTCGTGGCTTTGCCCTCACGGCAACCCCCGCCAAGTTGGGCGA
ACTCAATCGGATTCGGCAGCTCCATAGGCAGCTGAACTACCCCCGCAGCCCCCTGGTGCACGTCTTTGTAGTTGAACGCA
TCGCTGATGCATCTGCCGTGGCTTTTCTGCTGATGCTGTTGACGCCGAATCAATTGCTGGTGCATCTTTCAGGCCTGAAT
TGGATCGTTGAACTACTGCTAGCTGTGGGGGTGTTGGCTGTTGTTTTCTTTTCCGCCTTACGCCCCCTGCGCTGCTTCTT
ATCCAATCGCCTAAAAAGCTGGCATCATCATCTACCCAGCGGCGCTCTGGGGCGCGCCATCTGGCCCGCCATATTGATTT
CAATGGCGCTGTGGGCCAATGAGGCCTTAGTGCTTTGGTTACTGGTGCACTTGCTGAGCCCTACACCGATCACCATCCCA
ACAGCCATCAGCATTTATTTGCTGTCTGGTGTCATCGGCATAGCTTCATCATTACCTGGCGGGGTTGGAGTGAATGAGGC
CGTCACAGTCTTGCTTTTAAGCAGACTGGACATTGGCCCTGCAGTCGCCCTGCCGGTTGCGGTGCTTAGGCGGATTATCA
CCCTTTGGTCAATCGTGGCTCTCGCTGCTGCGATTAGGATTTTCTGGCCTTATCCAGCCTTCTCATCTAGCAAGTTTGCG
AAAGGATGA

Upstream 100 bases:

>100_bases
CCGTCGCCACTCCGGCCACTCTGCTAATCCGCTTGATGACTCTCTGGTTCGCTACCGGTCTGGGAGTGTTGTGCTTGCTA
TGGCAAGAGCGTAGAAGCTG

Downstream 100 bases:

>100_bases
ACACTATGGGTCAAGCAGCGAGAACTCCGATTCGCAGCTCCTTTGTGCTCGGAAGTACCAGTGAAATAGCCAAGGCAATT
TGCCATGAGTTGGCTCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSAADSEPSQGWKPAWSSFIALTLLAVALTAMLQRPASERQVLVASTHKLLLWLPVLYGIVVVSYAGRYWRWRLLLGRIG
IGRLSWADLIGWFRGFALTATPAKLGELNRIRQLHRQLNYPRSPLVHVFVVERIADASAVAFLLMLLTPNQLLVHLSGLN
WIVELLLAVGVLAVVFFSALRPLRCFLSNRLKSWHHHLPSGALGRAIWPAILISMALWANEALVLWLLVHLLSPTPITIP
TAISIYLLSGVIGIASSLPGGVGVNEAVTVLLLSRLDIGPAVALPVAVLRRIITLWSIVALAAAIRIFWPYPAFSSSKFA
KG

Sequences:

>Translated_322_residues
MSAADSEPSQGWKPAWSSFIALTLLAVALTAMLQRPASERQVLVASTHKLLLWLPVLYGIVVVSYAGRYWRWRLLLGRIG
IGRLSWADLIGWFRGFALTATPAKLGELNRIRQLHRQLNYPRSPLVHVFVVERIADASAVAFLLMLLTPNQLLVHLSGLN
WIVELLLAVGVLAVVFFSALRPLRCFLSNRLKSWHHHLPSGALGRAIWPAILISMALWANEALVLWLLVHLLSPTPITIP
TAISIYLLSGVIGIASSLPGGVGVNEAVTVLLLSRLDIGPAVALPVAVLRRIITLWSIVALAAAIRIFWPYPAFSSSKFA
KG
>Mature_321_residues
SAADSEPSQGWKPAWSSFIALTLLAVALTAMLQRPASERQVLVASTHKLLLWLPVLYGIVVVSYAGRYWRWRLLLGRIGI
GRLSWADLIGWFRGFALTATPAKLGELNRIRQLHRQLNYPRSPLVHVFVVERIADASAVAFLLMLLTPNQLLVHLSGLNW
IVELLLAVGVLAVVFFSALRPLRCFLSNRLKSWHHHLPSGALGRAIWPAILISMALWANEALVLWLLVHLLSPTPITIPT
AISIYLLSGVIGIASSLPGGVGVNEAVTVLLLSRLDIGPAVALPVAVLRRIITLWSIVALAAAIRIFWPYPAFSSSKFAK
G

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35305; Mature: 35173

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAADSEPSQGWKPAWSSFIALTLLAVALTAMLQRPASERQVLVASTHKLLLWLPVLYGI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH
VVVSYAGRYWRWRLLLGRIGIGRLSWADLIGWFRGFALTATPAKLGELNRIRQLHRQLNY
HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
PRSPLVHVFVVERIADASAVAFLLMLLTPNQLLVHLSGLNWIVELLLAVGVLAVVFFSAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RPLRCFLSNRLKSWHHHLPSGALGRAIWPAILISMALWANEALVLWLLVHLLSPTPITIP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHH
TAISIYLLSGVIGIASSLPGGVGVNEAVTVLLLSRLDIGPAVALPVAVLRRIITLWSIVA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LAAAIRIFWPYPAFSSSKFAKG
HHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAADSEPSQGWKPAWSSFIALTLLAVALTAMLQRPASERQVLVASTHKLLLWLPVLYGI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH
VVVSYAGRYWRWRLLLGRIGIGRLSWADLIGWFRGFALTATPAKLGELNRIRQLHRQLNY
HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
PRSPLVHVFVVERIADASAVAFLLMLLTPNQLLVHLSGLNWIVELLLAVGVLAVVFFSAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RPLRCFLSNRLKSWHHHLPSGALGRAIWPAILISMALWANEALVLWLLVHLLSPTPITIP
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHH
TAISIYLLSGVIGIASSLPGGVGVNEAVTVLLLSRLDIGPAVALPVAVLRRIITLWSIVA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LAAAIRIFWPYPAFSSSKFAKG
HHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA