| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33864298
Identifier: 33864298
GI number: 33864298
Start: 2145597
End: 2146565
Strand: Direct
Name: 33864298
Synonym: PMT2033
Alternate gene names: NA
Gene position: 2145597-2146565 (Clockwise)
Preceding gene: 33864297
Following gene: 33864299
Centisome position: 89.0
GC content: 55.01
Gene sequence:
>969_bases ATGTCAGCTGCTGACTCTGAACCCAGTCAAGGCTGGAAACCAGCATGGAGCAGTTTCATTGCCCTGACACTCCTAGCTGT GGCTTTAACGGCGATGCTGCAGAGGCCAGCTTCTGAGCGCCAAGTACTTGTAGCGTCGACCCACAAGCTGCTGCTGTGGC TTCCAGTGCTCTACGGCATCGTGGTAGTCAGCTATGCAGGCCGTTATTGGCGCTGGAGGCTATTACTGGGCCGAATTGGA ATCGGTCGACTGAGTTGGGCCGATCTGATCGGCTGGTTTCGTGGCTTTGCCCTCACGGCAACCCCCGCCAAGTTGGGCGA ACTCAATCGGATTCGGCAGCTCCATAGGCAGCTGAACTACCCCCGCAGCCCCCTGGTGCACGTCTTTGTAGTTGAACGCA TCGCTGATGCATCTGCCGTGGCTTTTCTGCTGATGCTGTTGACGCCGAATCAATTGCTGGTGCATCTTTCAGGCCTGAAT TGGATCGTTGAACTACTGCTAGCTGTGGGGGTGTTGGCTGTTGTTTTCTTTTCCGCCTTACGCCCCCTGCGCTGCTTCTT ATCCAATCGCCTAAAAAGCTGGCATCATCATCTACCCAGCGGCGCTCTGGGGCGCGCCATCTGGCCCGCCATATTGATTT CAATGGCGCTGTGGGCCAATGAGGCCTTAGTGCTTTGGTTACTGGTGCACTTGCTGAGCCCTACACCGATCACCATCCCA ACAGCCATCAGCATTTATTTGCTGTCTGGTGTCATCGGCATAGCTTCATCATTACCTGGCGGGGTTGGAGTGAATGAGGC CGTCACAGTCTTGCTTTTAAGCAGACTGGACATTGGCCCTGCAGTCGCCCTGCCGGTTGCGGTGCTTAGGCGGATTATCA CCCTTTGGTCAATCGTGGCTCTCGCTGCTGCGATTAGGATTTTCTGGCCTTATCCAGCCTTCTCATCTAGCAAGTTTGCG AAAGGATGA
Upstream 100 bases:
>100_bases CCGTCGCCACTCCGGCCACTCTGCTAATCCGCTTGATGACTCTCTGGTTCGCTACCGGTCTGGGAGTGTTGTGCTTGCTA TGGCAAGAGCGTAGAAGCTG
Downstream 100 bases:
>100_bases ACACTATGGGTCAAGCAGCGAGAACTCCGATTCGCAGCTCCTTTGTGCTCGGAAGTACCAGTGAAATAGCCAAGGCAATT TGCCATGAGTTGGCTCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSAADSEPSQGWKPAWSSFIALTLLAVALTAMLQRPASERQVLVASTHKLLLWLPVLYGIVVVSYAGRYWRWRLLLGRIG IGRLSWADLIGWFRGFALTATPAKLGELNRIRQLHRQLNYPRSPLVHVFVVERIADASAVAFLLMLLTPNQLLVHLSGLN WIVELLLAVGVLAVVFFSALRPLRCFLSNRLKSWHHHLPSGALGRAIWPAILISMALWANEALVLWLLVHLLSPTPITIP TAISIYLLSGVIGIASSLPGGVGVNEAVTVLLLSRLDIGPAVALPVAVLRRIITLWSIVALAAAIRIFWPYPAFSSSKFA KG
Sequences:
>Translated_322_residues MSAADSEPSQGWKPAWSSFIALTLLAVALTAMLQRPASERQVLVASTHKLLLWLPVLYGIVVVSYAGRYWRWRLLLGRIG IGRLSWADLIGWFRGFALTATPAKLGELNRIRQLHRQLNYPRSPLVHVFVVERIADASAVAFLLMLLTPNQLLVHLSGLN WIVELLLAVGVLAVVFFSALRPLRCFLSNRLKSWHHHLPSGALGRAIWPAILISMALWANEALVLWLLVHLLSPTPITIP TAISIYLLSGVIGIASSLPGGVGVNEAVTVLLLSRLDIGPAVALPVAVLRRIITLWSIVALAAAIRIFWPYPAFSSSKFA KG >Mature_321_residues SAADSEPSQGWKPAWSSFIALTLLAVALTAMLQRPASERQVLVASTHKLLLWLPVLYGIVVVSYAGRYWRWRLLLGRIGI GRLSWADLIGWFRGFALTATPAKLGELNRIRQLHRQLNYPRSPLVHVFVVERIADASAVAFLLMLLTPNQLLVHLSGLNW IVELLLAVGVLAVVFFSALRPLRCFLSNRLKSWHHHLPSGALGRAIWPAILISMALWANEALVLWLLVHLLSPTPITIPT AISIYLLSGVIGIASSLPGGVGVNEAVTVLLLSRLDIGPAVALPVAVLRRIITLWSIVALAAAIRIFWPYPAFSSSKFAK G
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35305; Mature: 35173
Theoretical pI: Translated: 11.69; Mature: 11.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAADSEPSQGWKPAWSSFIALTLLAVALTAMLQRPASERQVLVASTHKLLLWLPVLYGI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH VVVSYAGRYWRWRLLLGRIGIGRLSWADLIGWFRGFALTATPAKLGELNRIRQLHRQLNY HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC PRSPLVHVFVVERIADASAVAFLLMLLTPNQLLVHLSGLNWIVELLLAVGVLAVVFFSAL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPLRCFLSNRLKSWHHHLPSGALGRAIWPAILISMALWANEALVLWLLVHLLSPTPITIP HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHH TAISIYLLSGVIGIASSLPGGVGVNEAVTVLLLSRLDIGPAVALPVAVLRRIITLWSIVA HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LAAAIRIFWPYPAFSSSKFAKG HHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SAADSEPSQGWKPAWSSFIALTLLAVALTAMLQRPASERQVLVASTHKLLLWLPVLYGI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHH VVVSYAGRYWRWRLLLGRIGIGRLSWADLIGWFRGFALTATPAKLGELNRIRQLHRQLNY HHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC PRSPLVHVFVVERIADASAVAFLLMLLTPNQLLVHLSGLNWIVELLLAVGVLAVVFFSAL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPLRCFLSNRLKSWHHHLPSGALGRAIWPAILISMALWANEALVLWLLVHLLSPTPITIP HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHH TAISIYLLSGVIGIASSLPGGVGVNEAVTVLLLSRLDIGPAVALPVAVLRRIITLWSIVA HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LAAAIRIFWPYPAFSSSKFAKG HHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA