| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is fabG [C]
Identifier: 33864299
GI number: 33864299
Start: 2146571
End: 2147317
Strand: Direct
Name: fabG [C]
Synonym: PMT2034
Alternate gene names: 33864299
Gene position: 2146571-2147317 (Clockwise)
Preceding gene: 33864298
Following gene: 33864300
Centisome position: 89.04
GC content: 54.22
Gene sequence:
>747_bases ATGGGTCAAGCAGCGAGAACTCCGATTCGCAGCTCCTTTGTGCTCGGAAGTACCAGTGAAATAGCCAAGGCAATTTGCCA TGAGTTGGCTCGATGTGGCTGTCGTCAGTTCCATTTGATTGCCCGCAACCAGGCTGGGAACGAACAACTGGCCGAACAAC TGAGAAATCACTATGGCGCAGTCGTCACCCAGGAGCAGACCGATCTTTTGACTGATGTAGCCCTTGATGGTCCTGGCAAG CCGCAGGTGGGCAACTATGACTTGTATTTGATCACTGCGGGTTCTCTTGGTGATCTCGAACTAGCGCGCAACGATGCCAC TGAGGCCTTGCGAATCACAGCTGCAAACTACAGCGGTCTACTGCCATGGTTAACTGCAATTGCTACTCCTGAGCGGCTTT CTGGCCCGGGGCGGTTGTGGGTGTTCAGTTCAGTTGCAGCTGATCTTGGCAGACCCTCCAACTATCACTACGGAGCAGCC AAAGCTGCTCTTACTGCGTTCTGCGAGGGTCTACAACTGCGCTGCCAAAGGAAGCCTTTTGCAGTGCGCACCATCAAGGC TGGCTTTATGGCCACATCGATGACGATTGGCAAGGCACCAAAAGTTCTGTGCGTCAGTCCACAATCGGTGGCGCGTGATC TACTGAGACGCCCCAACCGTAGAGGTATCGAATACCTCCCCTGGTGGTGGGCACAGATCATGTGGTTCATTCGCTTGTTG CCTGCGCCCTTTGCTTCAAGGCTGTGA
Upstream 100 bases:
>100_bases TTATCACCCTTTGGTCAATCGTGGCTCTCGCTGCTGCGATTAGGATTTTCTGGCCTTATCCAGCCTTCTCATCTAGCAAG TTTGCGAAAGGATGAACACT
Downstream 100 bases:
>100_bases CCTTGCCCCTCTCTTCGCAAACACAAATCCTCAGCGGTTGGGGCCGCACAATGCCAGTGCAGGCAAAGGTTGTGCAGCCA GCCAGCGTCCAACAAGTCCA
Product: hypothetical protein
Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MGQAARTPIRSSFVLGSTSEIAKAICHELARCGCRQFHLIARNQAGNEQLAEQLRNHYGAVVTQEQTDLLTDVALDGPGK PQVGNYDLYLITAGSLGDLELARNDATEALRITAANYSGLLPWLTAIATPERLSGPGRLWVFSSVAADLGRPSNYHYGAA KAALTAFCEGLQLRCQRKPFAVRTIKAGFMATSMTIGKAPKVLCVSPQSVARDLLRRPNRRGIEYLPWWWAQIMWFIRLL PAPFASRL
Sequences:
>Translated_248_residues MGQAARTPIRSSFVLGSTSEIAKAICHELARCGCRQFHLIARNQAGNEQLAEQLRNHYGAVVTQEQTDLLTDVALDGPGK PQVGNYDLYLITAGSLGDLELARNDATEALRITAANYSGLLPWLTAIATPERLSGPGRLWVFSSVAADLGRPSNYHYGAA KAALTAFCEGLQLRCQRKPFAVRTIKAGFMATSMTIGKAPKVLCVSPQSVARDLLRRPNRRGIEYLPWWWAQIMWFIRLL PAPFASRL >Mature_247_residues GQAARTPIRSSFVLGSTSEIAKAICHELARCGCRQFHLIARNQAGNEQLAEQLRNHYGAVVTQEQTDLLTDVALDGPGKP QVGNYDLYLITAGSLGDLELARNDATEALRITAANYSGLLPWLTAIATPERLSGPGRLWVFSSVAADLGRPSNYHYGAAK AALTAFCEGLQLRCQRKPFAVRTIKAGFMATSMTIGKAPKVLCVSPQSVARDLLRRPNRRGIEYLPWWWAQIMWFIRLLP APFASRL
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.1.1.100 [C]
Molecular weight: Translated: 27254; Mature: 27123
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQAARTPIRSSFVLGSTSEIAKAICHELARCGCRQFHLIARNQAGNEQLAEQLRNHYGA CCCCCCCCCHHHEECCCHHHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHCCC VVTQEQTDLLTDVALDGPGKPQVGNYDLYLITAGSLGDLELARNDATEALRITAANYSGL EEECCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCEEEEEECCCCCH LPWLTAIATPERLSGPGRLWVFSSVAADLGRPSNYHYGAAKAALTAFCEGLQLRCQRKPF HHHHHHHCCHHHCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC AVRTIKAGFMATSMTIGKAPKVLCVSPQSVARDLLRRPNRRGIEYLPWWWAQIMWFIRLL EEEHHHHHHHHHHEECCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH PAPFASRL CCHHHCCC >Mature Secondary Structure GQAARTPIRSSFVLGSTSEIAKAICHELARCGCRQFHLIARNQAGNEQLAEQLRNHYGA CCCCCCCCHHHEECCCHHHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHCCC VVTQEQTDLLTDVALDGPGKPQVGNYDLYLITAGSLGDLELARNDATEALRITAANYSGL EEECCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCEEEEEECCCCCH LPWLTAIATPERLSGPGRLWVFSSVAADLGRPSNYHYGAAKAALTAFCEGLQLRCQRKPF HHHHHHHCCHHHCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC AVRTIKAGFMATSMTIGKAPKVLCVSPQSVARDLLRRPNRRGIEYLPWWWAQIMWFIRLL EEEHHHHHHHHHHEECCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH PAPFASRL CCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]
Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]