| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33864296
Identifier: 33864296
GI number: 33864296
Start: 2143133
End: 2144053
Strand: Direct
Name: 33864296
Synonym: PMT2031
Alternate gene names: NA
Gene position: 2143133-2144053 (Clockwise)
Preceding gene: 33864294
Following gene: 33864297
Centisome position: 88.89
GC content: 52.23
Gene sequence:
>921_bases ATGAATTTGGCTCTTTCCCCAACGCTGGCTGCATGTCGGCCCCGGCAATGGCCAAAGAATCTGTTGGTTTTCGCTGCTCC ACTTTTTGCCTTCCGCTTCGAGATTGAGATTTGGCAGCGAGCACTTGCTGCACTTGTGGCTTTCTGCTTGATCTCTAGCG CGATCTATCTACTGAATGACTGTCTTGATGTCGAGGTCGATCGAGTTCACCCCAGCAAAAGATATAGATCCATCGCCTCT GGGCTGGTCACGGTGCCTGCAGCCCTAGCAACAGCATTGATGCTCACAGTAGTCAGCCTCAGTTTCGCAGCCGTAATTAC TCCAAAGTTGGCAGGCGTGGTGCTGCTATACGGCCTCATTCAAGTCGGCTACTGCTTAAAGCTGAAGCACCAACCGTTAC TTGATCTTTTCGCTATCGCATCGGGATTCTTATTGCGGGCCATCGCAGGTGCTGTTGCTGCTGGCCTACCCCTTTCCCCC TGGTTCCTGCTCACTGTGGGACTGCTAGCGCTTTTTCTAGCTATTGAAAAGCGCAAGGCCGAACTTCGCGTAACGAAGAA CGCTGGGGTAACGACCCGCACAGTATTGAAGCGCTACTCATTACCTCTGCTGCTGCGGCTTGAAAGCTTGGTGGCAACCA GTTCCTTTATGTCTTATTCACTCTGGGCCGCCGGTCCAGCTCTGAAAGGAGCGTCAACCAGTTGGATGCTACTCACCGTA CCCTTCGTACTAGTAGGGATTTTCCGCTATCAGTTGCTCAGTGATCCTGAAGAGGTCGAACGCCGTGGCACATTGAGACC AGATCTCAATGGCGAAAAGCCTGAGGAGATTCTGTTGAATGATCGCGGCATTCAGTTCACCTTGATCGGCTGGGTCTTGA CTACTTTGCTGATCGGGTTAGTCAACCACGCAGCTGCATAA
Upstream 100 bases:
>100_bases GTCTCTAGAGGCGTTTGGCTCAGCGGTAGAAAGCCTGCCTTACAAACACGATCTCGCTGGTTCTATCCCGGCATCGCTAA TCACCTAAAAGGTCTAGTCA
Downstream 100 bases:
>100_bases TCATGGCGATTGCAGTTTTTGATGTGGACGGCACCCTTTTGCAGGGTGATTGTCTACTGATGGCATGCCGACGATCGCGT GGCGCCTTGGGCACAGTCTT
Product: phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MNLALSPTLAACRPRQWPKNLLVFAAPLFAFRFEIEIWQRALAALVAFCLISSAIYLLNDCLDVEVDRVHPSKRYRSIAS GLVTVPAALATALMLTVVSLSFAAVITPKLAGVVLLYGLIQVGYCLKLKHQPLLDLFAIASGFLLRAIAGAVAAGLPLSP WFLLTVGLLALFLAIEKRKAELRVTKNAGVTTRTVLKRYSLPLLLRLESLVATSSFMSYSLWAAGPALKGASTSWMLLTV PFVLVGIFRYQLLSDPEEVERRGTLRPDLNGEKPEEILLNDRGIQFTLIGWVLTTLLIGLVNHAAA
Sequences:
>Translated_306_residues MNLALSPTLAACRPRQWPKNLLVFAAPLFAFRFEIEIWQRALAALVAFCLISSAIYLLNDCLDVEVDRVHPSKRYRSIAS GLVTVPAALATALMLTVVSLSFAAVITPKLAGVVLLYGLIQVGYCLKLKHQPLLDLFAIASGFLLRAIAGAVAAGLPLSP WFLLTVGLLALFLAIEKRKAELRVTKNAGVTTRTVLKRYSLPLLLRLESLVATSSFMSYSLWAAGPALKGASTSWMLLTV PFVLVGIFRYQLLSDPEEVERRGTLRPDLNGEKPEEILLNDRGIQFTLIGWVLTTLLIGLVNHAAA >Mature_306_residues MNLALSPTLAACRPRQWPKNLLVFAAPLFAFRFEIEIWQRALAALVAFCLISSAIYLLNDCLDVEVDRVHPSKRYRSIAS GLVTVPAALATALMLTVVSLSFAAVITPKLAGVVLLYGLIQVGYCLKLKHQPLLDLFAIASGFLLRAIAGAVAAGLPLSP WFLLTVGLLALFLAIEKRKAELRVTKNAGVTTRTVLKRYSLPLLLRLESLVATSSFMSYSLWAAGPALKGASTSWMLLTV PFVLVGIFRYQLLSDPEEVERRGTLRPDLNGEKPEEILLNDRGIQFTLIGWVLTTLLIGLVNHAAA
Specific function: Possible permease/transporter [H]
COG id: COG0382
COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: NA
Molecular weight: Translated: 33394; Mature: 33394
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLALSPTLAACRPRQWPKNLLVFAAPLFAFRFEIEIWQRALAALVAFCLISSAIYLLND CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLDVEVDRVHPSKRYRSIASGLVTVPAALATALMLTVVSLSFAAVITPKLAGVVLLYGLI HHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVGYCLKLKHQPLLDLFAIASGFLLRAIAGAVAAGLPLSPWFLLTVGLLALFLAIEKRKA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH ELRVTKNAGVTTRTVLKRYSLPLLLRLESLVATSSFMSYSLWAAGPALKGASTSWMLLTV HEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH PFVLVGIFRYQLLSDPEEVERRGTLRPDLNGEKPEEILLNDRGIQFTLIGWVLTTLLIGL HHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEEHHHHHHHHHHHHH VNHAAA HHHCCC >Mature Secondary Structure MNLALSPTLAACRPRQWPKNLLVFAAPLFAFRFEIEIWQRALAALVAFCLISSAIYLLND CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLDVEVDRVHPSKRYRSIASGLVTVPAALATALMLTVVSLSFAAVITPKLAGVVLLYGLI HHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVGYCLKLKHQPLLDLFAIASGFLLRAIAGAVAAGLPLSPWFLLTVGLLALFLAIEKRKA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH ELRVTKNAGVTTRTVLKRYSLPLLLRLESLVATSSFMSYSLWAAGPALKGASTSWMLLTV HEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH PFVLVGIFRYQLLSDPEEVERRGTLRPDLNGEKPEEILLNDRGIQFTLIGWVLTTLLIGL HHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEEHHHHHHHHHHHHH VNHAAA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]