| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864289
Identifier: 33864289
GI number: 33864289
Start: 2135767
End: 2137380
Strand: Reverse
Name: 33864289
Synonym: PMT2024
Alternate gene names: NA
Gene position: 2137380-2135767 (Counterclockwise)
Preceding gene: 33864290
Following gene: 33864288
Centisome position: 88.66
GC content: 57.19
Gene sequence:
>1614_bases ATGAAGGCCCGCCCGTTTTTGATTGCCGTGCTAGCCACGGTGTTTGTCCTGTTCTCATTGGTGGCGGGGCTTGGATGGGC TATGGCCCGCCAAAACCCTCTGCGTTTGGTTGATCAGCCACTGGAGTTGCCACGTGCTGCAAGGTTTGTGCCTCGAGATG CTGCTCTTGCCGTTCATTGGTTGATGGATCCAGTGCGTGTGCCGGCCTATGCCCAGGCTGTAGCTCCGGCACGCAACCGT CGCAAGGCTCGCGATGGTGCTCAGCAGATTCGTGATGGTGCTTTCGCACTCGCTGGTTTGGATTTTGAGTCGGAGTTGGT CGATTGGCTTGGTCCGCAAGTGAGCATGGCTCTGTTGGAACCCGACGGGCCAGAGGCATCCATGGGTTGGCTTTTGGTTC TAGAGAGTCGAGATCAGGATGGTGCGAGGCGGTTTTTGCAGCGCTTTTGGCAAGCCCGCAGCTTGGCTGGCACAGATCTG CAGATCAGCCGCTATCGGGGGATGGGAGTGATTAGTGGCAAAGGGGCTCTGAGGGGGCGCAATCCACAGCCTTTAGCAAC AGCATTGATCGACGATGACCTGTTGTTGCTTGCCTCCGGCCGGGGGGTATTGGAACAGGCTCTTGATGTTTCCCAGTTGG CTGATCAGCATCAACTTGGCGATCATGAGCTTGTCGAGATCGTGCGCCAGCTTGGTGATGGTGTGGCGCTGATGGTTGCC TCGCCGCCCGCTCTTCACTCTTGGTTAGGCCTGCCTAAGCCGCTCAGCCAGCGTGAGGATCTGTTGGGTTTGGTGGCTGC CTTGAAGCCTGAAGGGTCCGATTTGGCGATGGAAGGGCTGTTGCGTTTCCAGCAACCCTTGGAAGCCGTTGCGAGTGAGG TTGGAGCAGCTGATGGACTTGCTCAGCTCACTACCTCGGCTGGTGGTCAGGCGGAGGCCCTCGCTTTGCTGAGTTCACCT TCTCGATTACTTGATCCCTCAGATCAGGATCCTCTGGTGCAGTGGTTAGGTCCCTTACTGCGTCAGCAGTTGACGGCAAA TGAAGTGTCTTCGGCTGCCACGATTGCTGGTTTGGACGATGGACCGTTGTTGTGGCTTCAGCAGCCCGAAGGCTGGCTGG TTGCGACCAAGCAGGACTATCCAGCTGTCTCGGTGGTGGATGATGCGCTGACTGAGCAGGGTTTTATTCGTTCGGATTTG CCGTTTGATGACAAATCTCTGCAGGTGTGGACGCGCTTGGCACGTCAACAAAGCTCCACTAAGAACTTGCTTGAGGCTCA GTTGGGCGTTGCTTTGGCCCAAGAGCCAGACCAGGCCTGGTGGGGGCAGACCCTTGCGGCTCTGCAGCAGCGCAAGCAGG GTAAGGCGTTACAGCCTCGTCTTCGTCAGCTGAACAATCTCAATCGAGATGATCGTCCGCTTACTCAACAGCTGGTTCTT GGTGCAAGTCCTGGTCGGGTGCAGCTTCAGCATTGGCGTCCCTGGACGTTGATGCAAACGCTTGCTGATGGTTCATTGCA GCCCAGTGTGCAGGGGTTGGCCATGGCTGTGGGGCCTGATCAAGATGAACAAAGCTCTTCTCTTCGCATGCGTGCCCGCC TCAACCTCGGTTGA
Upstream 100 bases:
>100_bases TCGACTCATTGATGTTGCCTTTGTGAGCGCTTCATACTGGGCGCAAGACGATCAGATGATTAATGGATAAAGATGATCTA AAGAGTCCCATTGCCGGCCC
Downstream 100 bases:
>100_bases TCTTTTCTTATTGCGCCATGGCATCGCTGAGCAGCGTTGCTATGGCGTTGATGATTCGCGACGCCCACTTACAGAGCAAG GAATTCTGCGCACGATGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MKARPFLIAVLATVFVLFSLVAGLGWAMARQNPLRLVDQPLELPRAARFVPRDAALAVHWLMDPVRVPAYAQAVAPARNR RKARDGAQQIRDGAFALAGLDFESELVDWLGPQVSMALLEPDGPEASMGWLLVLESRDQDGARRFLQRFWQARSLAGTDL QISRYRGMGVISGKGALRGRNPQPLATALIDDDLLLLASGRGVLEQALDVSQLADQHQLGDHELVEIVRQLGDGVALMVA SPPALHSWLGLPKPLSQREDLLGLVAALKPEGSDLAMEGLLRFQQPLEAVASEVGAADGLAQLTTSAGGQAEALALLSSP SRLLDPSDQDPLVQWLGPLLRQQLTANEVSSAATIAGLDDGPLLWLQQPEGWLVATKQDYPAVSVVDDALTEQGFIRSDL PFDDKSLQVWTRLARQQSSTKNLLEAQLGVALAQEPDQAWWGQTLAALQQRKQGKALQPRLRQLNNLNRDDRPLTQQLVL GASPGRVQLQHWRPWTLMQTLADGSLQPSVQGLAMAVGPDQDEQSSSLRMRARLNLG
Sequences:
>Translated_537_residues MKARPFLIAVLATVFVLFSLVAGLGWAMARQNPLRLVDQPLELPRAARFVPRDAALAVHWLMDPVRVPAYAQAVAPARNR RKARDGAQQIRDGAFALAGLDFESELVDWLGPQVSMALLEPDGPEASMGWLLVLESRDQDGARRFLQRFWQARSLAGTDL QISRYRGMGVISGKGALRGRNPQPLATALIDDDLLLLASGRGVLEQALDVSQLADQHQLGDHELVEIVRQLGDGVALMVA SPPALHSWLGLPKPLSQREDLLGLVAALKPEGSDLAMEGLLRFQQPLEAVASEVGAADGLAQLTTSAGGQAEALALLSSP SRLLDPSDQDPLVQWLGPLLRQQLTANEVSSAATIAGLDDGPLLWLQQPEGWLVATKQDYPAVSVVDDALTEQGFIRSDL PFDDKSLQVWTRLARQQSSTKNLLEAQLGVALAQEPDQAWWGQTLAALQQRKQGKALQPRLRQLNNLNRDDRPLTQQLVL GASPGRVQLQHWRPWTLMQTLADGSLQPSVQGLAMAVGPDQDEQSSSLRMRARLNLG >Mature_537_residues MKARPFLIAVLATVFVLFSLVAGLGWAMARQNPLRLVDQPLELPRAARFVPRDAALAVHWLMDPVRVPAYAQAVAPARNR RKARDGAQQIRDGAFALAGLDFESELVDWLGPQVSMALLEPDGPEASMGWLLVLESRDQDGARRFLQRFWQARSLAGTDL QISRYRGMGVISGKGALRGRNPQPLATALIDDDLLLLASGRGVLEQALDVSQLADQHQLGDHELVEIVRQLGDGVALMVA SPPALHSWLGLPKPLSQREDLLGLVAALKPEGSDLAMEGLLRFQQPLEAVASEVGAADGLAQLTTSAGGQAEALALLSSP SRLLDPSDQDPLVQWLGPLLRQQLTANEVSSAATIAGLDDGPLLWLQQPEGWLVATKQDYPAVSVVDDALTEQGFIRSDL PFDDKSLQVWTRLARQQSSTKNLLEAQLGVALAQEPDQAWWGQTLAALQQRKQGKALQPRLRQLNNLNRDDRPLTQQLVL GASPGRVQLQHWRPWTLMQTLADGSLQPSVQGLAMAVGPDQDEQSSSLRMRARLNLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58434; Mature: 58434
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARPFLIAVLATVFVLFSLVAGLGWAMARQNPLRLVDQPLELPRAARFVPRDAALAVHW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCCHHHHHHHH LMDPVRVPAYAQAVAPARNRRKARDGAQQIRDGAFALAGLDFESELVDWLGPQVSMALLE HHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCEEEEEEC PDGPEASMGWLLVLESRDQDGARRFLQRFWQARSLAGTDLQISRYRGMGVISGKGALRGR CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEHHCCCEEEECCCCCCCC NPQPLATALIDDDLLLLASGRGVLEQALDVSQLADQHQLGDHELVEIVRQLGDGVALMVA CCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEE SPPALHSWLGLPKPLSQREDLLGLVAALKPEGSDLAMEGLLRFQQPLEAVASEVGAADGL CCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH AQLTTSAGGQAEALALLSSPSRLLDPSDQDPLVQWLGPLLRQQLTANEVSSAATIAGLDD HHHHHCCCCCHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHEEECCCC GPLLWLQQPEGWLVATKQDYPAVSVVDDALTEQGFIRSDLPFDDKSLQVWTRLARQQSST CCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH KNLLEAQLGVALAQEPDQAWWGQTLAALQQRKQGKALQPRLRQLNNLNRDDRPLTQQLVL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHH GASPGRVQLQHWRPWTLMQTLADGSLQPSVQGLAMAVGPDQDEQSSSLRMRARLNLG CCCCCCEEEECCCCHHHHHHHHCCCCCCCHHCEEEEECCCCCCCHHHHEEHEECCCC >Mature Secondary Structure MKARPFLIAVLATVFVLFSLVAGLGWAMARQNPLRLVDQPLELPRAARFVPRDAALAVHW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCCHHHHHHHH LMDPVRVPAYAQAVAPARNRRKARDGAQQIRDGAFALAGLDFESELVDWLGPQVSMALLE HHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCEEEEEEC PDGPEASMGWLLVLESRDQDGARRFLQRFWQARSLAGTDLQISRYRGMGVISGKGALRGR CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEHHCCCEEEECCCCCCCC NPQPLATALIDDDLLLLASGRGVLEQALDVSQLADQHQLGDHELVEIVRQLGDGVALMVA CCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEE SPPALHSWLGLPKPLSQREDLLGLVAALKPEGSDLAMEGLLRFQQPLEAVASEVGAADGL CCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH AQLTTSAGGQAEALALLSSPSRLLDPSDQDPLVQWLGPLLRQQLTANEVSSAATIAGLDD HHHHHCCCCCHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHEEECCCC GPLLWLQQPEGWLVATKQDYPAVSVVDDALTEQGFIRSDLPFDDKSLQVWTRLARQQSST CCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH KNLLEAQLGVALAQEPDQAWWGQTLAALQQRKQGKALQPRLRQLNNLNRDDRPLTQQLVL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHH GASPGRVQLQHWRPWTLMQTLADGSLQPSVQGLAMAVGPDQDEQSSSLRMRARLNLG CCCCCCEEEECCCCHHHHHHHHCCCCCCCHHCEEEEECCCCCCCHHHHEEHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA