| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864290
Identifier: 33864290
GI number: 33864290
Start: 2137411
End: 2137677
Strand: Reverse
Name: 33864290
Synonym: PMT2025
Alternate gene names: NA
Gene position: 2137677-2137411 (Counterclockwise)
Preceding gene: 33864292
Following gene: 33864289
Centisome position: 88.67
GC content: 49.81
Gene sequence:
>267_bases TTGTGCTCTGTCACGAACTCACTAAGCCGGTCTCAGTGTTGGCGCAGCGCTTGCTTGCAACCCAGCATCACCAAGTCTCG ATGCTTCTTCCCAGATTGCAGCTGTTGTGTTTCTCGTCGTGTAGCTCGACAAGATTTTGTGGCGGAAAGTGTGTGGCTGT TCGCGATTCAGTTGGCTTGCACAAAGAGACCTGTCAATCGACTCATTGATGTTGCCTTTGTGAGCGCTTCATACTGGGCG CAAGACGATCAGATGATTAATGGATAA
Upstream 100 bases:
>100_bases GTGGTGCACCGTTGCTTGAAGCACCTGCTGTTGTCGTGCCGGTAGCGACTCCAAAGCGGTGACGTCGGGATCTTGATGGT ACGGGGGGGTTGCCCTTCTT
Downstream 100 bases:
>100_bases AGATGATCTAAAGAGTCCCATTGCCGGCCCATGAAGGCCCGCCCGTTTTTGATTGCCGTGCTAGCCACGGTGTTTGTCCT GTTCTCATTGGTGGCGGGGC
Product: Fungal Zn(2)-Cys(6) binuclear cluster
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MCSVTNSLSRSQCWRSACLQPSITKSRCFFPDCSCCVSRRVARQDFVAESVWLFAIQLACTKRPVNRLIDVAFVSASYWA QDDQMING
Sequences:
>Translated_88_residues MCSVTNSLSRSQCWRSACLQPSITKSRCFFPDCSCCVSRRVARQDFVAESVWLFAIQLACTKRPVNRLIDVAFVSASYWA QDDQMING >Mature_88_residues MCSVTNSLSRSQCWRSACLQPSITKSRCFFPDCSCCVSRRVARQDFVAESVWLFAIQLACTKRPVNRLIDVAFVSASYWA QDDQMING
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9962; Mature: 9962
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 11.4 %Cys+Met (Translated Protein) 9.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 11.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSVTNSLSRSQCWRSACLQPSITKSRCFFPDCSCCVSRRVARQDFVAESVWLFAIQLAC CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKRPVNRLIDVAFVSASYWAQDDQMING HHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MCSVTNSLSRSQCWRSACLQPSITKSRCFFPDCSCCVSRRVARQDFVAESVWLFAIQLAC CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKRPVNRLIDVAFVSASYWAQDDQMING HHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA