Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is cbiO [H]

Identifier: 33864252

GI number: 33864252

Start: 2100463

End: 2101140

Strand: Direct

Name: cbiO [H]

Synonym: PMT1987

Alternate gene names: 33864252

Gene position: 2100463-2101140 (Clockwise)

Preceding gene: 33864251

Following gene: 33864253

Centisome position: 87.12

GC content: 55.46

Gene sequence:

>678_bases
ATGGCCCCCCTCCTAAGCTTTGAGCAGGTGAGCTTCATTTGGCCCTGCGGCACAAAAGCCTTGGACCAATGCAGTTTTTC
AATTCCAGAACCAGGCCTATGGATGCTCGTAGGCAGCAATGGCAGCGGCAAAAGCACCCTTGCCAAGCTGATCAGCGGTT
TATTACAGCCAGAGCATGGTCAGGTGACTTGCATGCTCAAACCTGCTCTGGTGTTTCAAAACCCTGACCATCAACTGCTG
TTGCCAAGTTGCGGCAGCGACTTGCTGCTGAATTTACCTAGCGACATCCCAATCAAACAACGCCAACAGCGCATTGGCGA
TTCCCTAGAGCAGGTTGGTTTGGCCGCCATGGAATCGCGCCCGATTCACACCCTTAGCGGAGGCCAAAAACAACGCCTAG
CAATTGCCGGCGCCCTGGCCAGTGAGGCCACACTGCTGCTGCTGGATGAACCAACAGCACTACTAGACCCAGCAAGCCAA
CAAAGGATTTTGGCAACAGTTCAACAACTTTGCCATCGCTCCCACGCACCCCTGACCGCCCTTTGGGTCACCCATCGCCT
AGAAGAACTCGACCATGCTGATGGGGCTGCCAGGATGGAAAACGGCCGAGTAGGAGCCTGGCAATCTGGCCATCTGCTAC
GACAAAACCTCCAACCCCTTGCAGGTCGGCGGGGATGA

Upstream 100 bases:

>100_bases
ATGAGAAAACAGCAGCAACTGGAGGCAGTAAGCGGCCTGGCTTTTCCTTTGAAACCTGAGGCCATGGTGGACGAGAACGC
TGATCAAAGCATCTTTAGAG

Downstream 100 bases:

>100_bases
AGGGTAGGTTCTTCGGGTTGCAATCCTCGGTAGCTCAGCGGTAGAGCGGTCGACTGTTAATCGATTGGTCGCAGGTTCGA
ATCCCGCCCGGGGAGTTTTC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MAPLLSFEQVSFIWPCGTKALDQCSFSIPEPGLWMLVGSNGSGKSTLAKLISGLLQPEHGQVTCMLKPALVFQNPDHQLL
LPSCGSDLLLNLPSDIPIKQRQQRIGDSLEQVGLAAMESRPIHTLSGGQKQRLAIAGALASEATLLLLDEPTALLDPASQ
QRILATVQQLCHRSHAPLTALWVTHRLEELDHADGAARMENGRVGAWQSGHLLRQNLQPLAGRRG

Sequences:

>Translated_225_residues
MAPLLSFEQVSFIWPCGTKALDQCSFSIPEPGLWMLVGSNGSGKSTLAKLISGLLQPEHGQVTCMLKPALVFQNPDHQLL
LPSCGSDLLLNLPSDIPIKQRQQRIGDSLEQVGLAAMESRPIHTLSGGQKQRLAIAGALASEATLLLLDEPTALLDPASQ
QRILATVQQLCHRSHAPLTALWVTHRLEELDHADGAARMENGRVGAWQSGHLLRQNLQPLAGRRG
>Mature_224_residues
APLLSFEQVSFIWPCGTKALDQCSFSIPEPGLWMLVGSNGSGKSTLAKLISGLLQPEHGQVTCMLKPALVFQNPDHQLLL
PSCGSDLLLNLPSDIPIKQRQQRIGDSLEQVGLAAMESRPIHTLSGGQKQRLAIAGALASEATLLLLDEPTALLDPASQQ
RILATVQQLCHRSHAPLTALWVTHRLEELDHADGAARMENGRVGAWQSGHLLRQNLQPLAGRRG

Specific function: Part of the ABC transporter complex CbiONQ involved in cobalt import. Responsible for energy coupling to the transport system [H]

COG id: COG1122

COG function: function code P; ABC-type cobalt transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI156105685, Length=234, Percent_Identity=31.1965811965812, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI9955968, Length=222, Percent_Identity=31.5315315315315, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI9955966, Length=222, Percent_Identity=31.5315315315315, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI45243524, Length=222, Percent_Identity=31.5315315315315, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI171184400, Length=225, Percent_Identity=28.8888888888889, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI73747915, Length=220, Percent_Identity=28.1818181818182, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI157502201, Length=196, Percent_Identity=29.0816326530612, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI108773784, Length=153, Percent_Identity=30.0653594771242, Blast_Score=64, Evalue=8e-11,
Organism=Homo sapiens, GI108773782, Length=153, Percent_Identity=30.0653594771242, Blast_Score=64, Evalue=8e-11,
Organism=Homo sapiens, GI150417984, Length=219, Percent_Identity=26.4840182648402, Blast_Score=64, Evalue=8e-11,
Organism=Escherichia coli, GI1787712, Length=219, Percent_Identity=31.5068493150685, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI87081791, Length=218, Percent_Identity=31.1926605504587, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1786398, Length=224, Percent_Identity=30.8035714285714, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1786698, Length=212, Percent_Identity=29.7169811320755, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788225, Length=203, Percent_Identity=33.0049261083744, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI48994943, Length=220, Percent_Identity=30.9090909090909, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1789873, Length=207, Percent_Identity=31.4009661835749, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87081709, Length=205, Percent_Identity=28.780487804878, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1786563, Length=194, Percent_Identity=32.4742268041237, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1788761, Length=206, Percent_Identity=32.0388349514563, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787758, Length=178, Percent_Identity=37.0786516853933, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1789032, Length=205, Percent_Identity=30.7317073170732, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786253, Length=195, Percent_Identity=33.8461538461538, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787547, Length=205, Percent_Identity=28.780487804878, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1788540, Length=209, Percent_Identity=30.1435406698565, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786319, Length=227, Percent_Identity=29.0748898678414, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787105, Length=224, Percent_Identity=28.125, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI87081782, Length=181, Percent_Identity=31.4917127071823, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1789962, Length=208, Percent_Identity=28.8461538461538, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=31.9047619047619, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787089, Length=225, Percent_Identity=29.3333333333333, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787370, Length=220, Percent_Identity=28.1818181818182, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI48995001, Length=220, Percent_Identity=27.7272727272727, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787112, Length=216, Percent_Identity=29.6296296296296, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787500, Length=199, Percent_Identity=27.6381909547739, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1790739, Length=207, Percent_Identity=30.4347826086957, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI87082267, Length=195, Percent_Identity=28.2051282051282, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788165, Length=190, Percent_Identity=30, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788053, Length=211, Percent_Identity=27.9620853080569, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1790467, Length=197, Percent_Identity=31.4720812182741, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787164, Length=190, Percent_Identity=30.5263157894737, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1789672, Length=230, Percent_Identity=26.5217391304348, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788506, Length=218, Percent_Identity=31.1926605504587, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787792, Length=219, Percent_Identity=26.4840182648402, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17567265, Length=237, Percent_Identity=29.957805907173, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17541710, Length=226, Percent_Identity=31.4159292035398, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17510237, Length=181, Percent_Identity=27.0718232044199, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI212646699, Length=227, Percent_Identity=28.6343612334802, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI115533608, Length=201, Percent_Identity=27.8606965174129, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193209708, Length=230, Percent_Identity=27.3913043478261, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=207, Percent_Identity=30.9178743961353, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=207, Percent_Identity=30.9178743961353, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71996809, Length=207, Percent_Identity=30.9178743961353, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115535101, Length=224, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320296, Length=181, Percent_Identity=31.4917127071823, Blast_Score=69, Evalue=7e-13,
Organism=Drosophila melanogaster, GI116007184, Length=184, Percent_Identity=30.9782608695652, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221500365, Length=184, Percent_Identity=30.9782608695652, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24653245, Length=207, Percent_Identity=31.4009661835749, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281363262, Length=207, Percent_Identity=31.4009661835749, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI23397593, Length=222, Percent_Identity=30.6306306306306, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015856
- InterPro:   IPR003593
- InterPro:   IPR022112 [H]

Pfam domain/function: PF00005 ABC_tran; PF12370 CoABC_C [H]

EC number: NA

Molecular weight: Translated: 24331; Mature: 24200

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MAPLLSFEQVSFIWPCGTKALDQCSFSIPEPGLWMLVGSNGSGKSTLAKLISGLLQPEHG
CCCCCCCCCEEEECCCCCHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC
QVTCMLKPALVFQNPDHQLLLPSCGSDLLLNLPSDIPIKQRQQRIGDSLEQVGLAAMESR
CEEEEEECEEEEECCCCEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PIHTLSGGQKQRLAIAGALASEATLLLLDEPTALLDPASQQRILATVQQLCHRSHAPLTA
CCEECCCCCHHHHHEEEHHCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHCCCCHHH
LWVTHRLEELDHADGAARMENGRVGAWQSGHLLRQNLQPLAGRRG
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCC
>Mature Secondary Structure 
APLLSFEQVSFIWPCGTKALDQCSFSIPEPGLWMLVGSNGSGKSTLAKLISGLLQPEHG
CCCCCCCCEEEECCCCCHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCC
QVTCMLKPALVFQNPDHQLLLPSCGSDLLLNLPSDIPIKQRQQRIGDSLEQVGLAAMESR
CEEEEEECEEEEECCCCEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PIHTLSGGQKQRLAIAGALASEATLLLLDEPTALLDPASQQRILATVQQLCHRSHAPLTA
CCEECCCCCHHHHHEEEHHCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHCCCCHHH
LWVTHRLEELDHADGAARMENGRVGAWQSGHLLRQNLQPLAGRRG
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA