Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33864251

Identifier: 33864251

GI number: 33864251

Start: 2100119

End: 2100421

Strand: Direct

Name: 33864251

Synonym: PMT1986

Alternate gene names: NA

Gene position: 2100119-2100421 (Clockwise)

Preceding gene: 33864248

Following gene: 33864252

Centisome position: 87.11

GC content: 49.83

Gene sequence:

>303_bases
GTGATTCGCAAGAATGATGCAATCCTGTCAACGTTGTCCGTGTACGTCATTGAGCTGGCCCTCAAATTGAGCCCCTTGCC
GGTATCGGTGCAGCGAAAAGCATTAACAGATGCGGAAGCCGTTTACCAGCAAGTGCGCAAGTGCCTGGAGAGAGGTCAGC
CTCACCTTCTCGAGCTCAGTTGCGAAAAAGTCGAAGACAAGAAAGTCACTGTTTTGGTCAGTGAAATAGTTGCTGTTCAG
CTCTATGAGAAAACAGCAGCAACTGGAGGCAGTAAGCGGCCTGGCTTTTCCTTTGAAACCTGA

Upstream 100 bases:

>100_bases
CTGGCCAAATGGAGAGGATGAATGAAGACCACTCGAGCGAACGGCTCATTATTAAGTGTAAATACTTATCCACTTTGGCC
TACATGGCAAATGGTGGGGC

Downstream 100 bases:

>100_bases
GGCCATGGTGGACGAGAACGCTGATCAAAGCATCTTTAGAGATGGCCCCCCTCCTAAGCTTTGAGCAGGTGAGCTTCATT
TGGCCCTGCGGCACAAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MIRKNDAILSTLSVYVIELALKLSPLPVSVQRKALTDAEAVYQQVRKCLERGQPHLLELSCEKVEDKKVTVLVSEIVAVQ
LYEKTAATGGSKRPGFSFET

Sequences:

>Translated_100_residues
MIRKNDAILSTLSVYVIELALKLSPLPVSVQRKALTDAEAVYQQVRKCLERGQPHLLELSCEKVEDKKVTVLVSEIVAVQ
LYEKTAATGGSKRPGFSFET
>Mature_100_residues
MIRKNDAILSTLSVYVIELALKLSPLPVSVQRKALTDAEAVYQQVRKCLERGQPHLLELSCEKVEDKKVTVLVSEIVAVQ
LYEKTAATGGSKRPGFSFET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0367 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1986_PROMM (Q7V4G6)

Other databases:

- EMBL:   BX548175
- RefSeq:   NP_895811.1
- STRING:   Q7V4G6
- GeneID:   1728033
- GenomeReviews:   BX548175_GR
- KEGG:   pmt:PMT1986
- NMPDR:   fig|74547.1.peg.1978
- eggNOG:   NOG15377
- HOGENOM:   HBG284625
- OMA:   VQIYEKS
- ProtClustDB:   PRK13683
- BioCyc:   PMAR74547:PMT1986-MONOMER
- HAMAP:   MF_01360
- InterPro:   IPR020885

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11075; Mature: 11075

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKNDAILSTLSVYVIELALKLSPLPVSVQRKALTDAEAVYQQVRKCLERGQPHLLELS
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEE
CEKVEDKKVTVLVSEIVAVQLYEKTAATGGSKRPGFSFET
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRKNDAILSTLSVYVIELALKLSPLPVSVQRKALTDAEAVYQQVRKCLERGQPHLLELS
CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEE
CEKVEDKKVTVLVSEIVAVQLYEKTAATGGSKRPGFSFET
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917642