| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864251
Identifier: 33864251
GI number: 33864251
Start: 2100119
End: 2100421
Strand: Direct
Name: 33864251
Synonym: PMT1986
Alternate gene names: NA
Gene position: 2100119-2100421 (Clockwise)
Preceding gene: 33864248
Following gene: 33864252
Centisome position: 87.11
GC content: 49.83
Gene sequence:
>303_bases GTGATTCGCAAGAATGATGCAATCCTGTCAACGTTGTCCGTGTACGTCATTGAGCTGGCCCTCAAATTGAGCCCCTTGCC GGTATCGGTGCAGCGAAAAGCATTAACAGATGCGGAAGCCGTTTACCAGCAAGTGCGCAAGTGCCTGGAGAGAGGTCAGC CTCACCTTCTCGAGCTCAGTTGCGAAAAAGTCGAAGACAAGAAAGTCACTGTTTTGGTCAGTGAAATAGTTGCTGTTCAG CTCTATGAGAAAACAGCAGCAACTGGAGGCAGTAAGCGGCCTGGCTTTTCCTTTGAAACCTGA
Upstream 100 bases:
>100_bases CTGGCCAAATGGAGAGGATGAATGAAGACCACTCGAGCGAACGGCTCATTATTAAGTGTAAATACTTATCCACTTTGGCC TACATGGCAAATGGTGGGGC
Downstream 100 bases:
>100_bases GGCCATGGTGGACGAGAACGCTGATCAAAGCATCTTTAGAGATGGCCCCCCTCCTAAGCTTTGAGCAGGTGAGCTTCATT TGGCCCTGCGGCACAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MIRKNDAILSTLSVYVIELALKLSPLPVSVQRKALTDAEAVYQQVRKCLERGQPHLLELSCEKVEDKKVTVLVSEIVAVQ LYEKTAATGGSKRPGFSFET
Sequences:
>Translated_100_residues MIRKNDAILSTLSVYVIELALKLSPLPVSVQRKALTDAEAVYQQVRKCLERGQPHLLELSCEKVEDKKVTVLVSEIVAVQ LYEKTAATGGSKRPGFSFET >Mature_100_residues MIRKNDAILSTLSVYVIELALKLSPLPVSVQRKALTDAEAVYQQVRKCLERGQPHLLELSCEKVEDKKVTVLVSEIVAVQ LYEKTAATGGSKRPGFSFET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0367 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1986_PROMM (Q7V4G6)
Other databases:
- EMBL: BX548175 - RefSeq: NP_895811.1 - STRING: Q7V4G6 - GeneID: 1728033 - GenomeReviews: BX548175_GR - KEGG: pmt:PMT1986 - NMPDR: fig|74547.1.peg.1978 - eggNOG: NOG15377 - HOGENOM: HBG284625 - OMA: VQIYEKS - ProtClustDB: PRK13683 - BioCyc: PMAR74547:PMT1986-MONOMER - HAMAP: MF_01360 - InterPro: IPR020885
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11075; Mature: 11075
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKNDAILSTLSVYVIELALKLSPLPVSVQRKALTDAEAVYQQVRKCLERGQPHLLELS CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEE CEKVEDKKVTVLVSEIVAVQLYEKTAATGGSKRPGFSFET HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MIRKNDAILSTLSVYVIELALKLSPLPVSVQRKALTDAEAVYQQVRKCLERGQPHLLELS CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEE CEKVEDKKVTVLVSEIVAVQLYEKTAATGGSKRPGFSFET HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917642