| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864248
Identifier: 33864248
GI number: 33864248
Start: 2094941
End: 2096353
Strand: Direct
Name: 33864248
Synonym: PMT1983
Alternate gene names: NA
Gene position: 2094941-2096353 (Clockwise)
Preceding gene: 33864247
Following gene: 33864251
Centisome position: 86.9
GC content: 54.21
Gene sequence:
>1413_bases TTGGACACCAAGGCCTGCCCACCCCGCCGCCTGAGCCTCGCCTGCCTGGCAATCTTCCTGCTGCTTTGGGCCGCCGCCGC AACTCGTCATGCTCTGCTGCAGAGCAATGCTTACGATCTTGGCCTGTTCGACCAGTGGATCTGGTTGGCCAGTCAAGGAT TGCCACCCTATTCATCGATGGAAGGGGTGCATCTGCTAGCTGATCACGGCGCCTGGGCTCTCTATCTGGCAGCCATTCCA TATCACTTCCATGCCAGCGTTCAATGGCTACTCGCCAGCCAGGCGGCTGGACTAAGCCTGACAGCACTACCCCTTTGGTG GGTGGGCCGACAAGCAGGCCTTACTCCAAAACTGTGCTGGCTGATCTGCACACTTTGGTGGCTGCAGCCAGTGGTGTTCA ACGCCAATCTGTTCGACTTCCACCCAGAGGTATGGGTGATGCCGGCCCTGGCAGCTTGTTACTGGGCCAGTCGAGCCAAA AAAGCCTGGCTCTGGTTTGGCTTACTGCTCTTATTGCTTGGCTGCCGTGATGGACTTGTGCTTGTGGTGGTAGGCCTGGG GTTAGAGCAGGCTTTGCGTAAGCGATGGATCTGGGCCTTTGCAGCCATTGGATTGGCCTTGGGCTGGTTGGCCATGCTCA ATCACTGGCTTTACCCCTGGCTGAAAGGAAGTACTGGAGGCCCTAAGGCAGCCGGAGCCCTTTTCTCTTACCTAGGCGAC AGTTTCGATGAGGTTCTCTTCAATCTGATCACAAAGCCTCAGTTGCTAATCGAGCATGTGGATTGGATCGGCGGACTGAT CTATCTGCTGTTAATCAGTATTGCCGTCGCTCCATTCTGGCGCCGAAACTCCCTACCCGTTCTGATGGGAGGTTTACCGC TAGTTCTGGTGAATCTGCTATCGGAAGAGTCACCGCAACGAACACTGATCCATCACTACAGCCTGCCAATTGCGGTGATA GCTGTTGTAGCTGCCATCGATGGACTGGCTGTACGCCCAAAACAAGCTGTTCCTTGGCGGCTACTGACCTGGAGCACCAT CTGCTGGGTAGCCCTTGCTAAGCCCTGGTTTTTTAGTGGGCCTTATCTGGAAAGACTCAATGCATTGACCCCATCCCATG AAGCCATCGCAAACATTCCTAGCAGTAGCCGCCTTGCCACTACCAGTTATCTCGCCCCCCATCTCAGCCAACGCATTGCA ATTGACTTCCCCCGCCGCAAAGGAAAGTCTTTAGATCTAGAAAGCTTTGATGTACTGCTTCTCAACCCAAAAGATCCAGG TTGGGGATCCAGCCAAAAACATCAACAGAAGCTATTAAGCAAAGCCAAACAAGCTGGCTGGTGGTGCGAAAGCTGGGACA ACGGCTTGGAACTTTGTCAGCGATCCGAGCACAAATCGATCAAACAACCTTAA
Upstream 100 bases:
>100_bases CAAAGAACTCATCCGATAGCTCATCTACACCGCCAACATGCTTTATCTGAGCAGAGGCGAAAGCCTATGAGATGCTCACC AACATCTTGAGCATTCCTGC
Downstream 100 bases:
>100_bases GACCGCCTTACTGGATTAAAAGCCTGCAAAACGATGCCCCCTCCATGAATGCATGGAGGGGGCTCTCGTCGGGTCCACTC TGGCGCGGAACCATTTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MDTKACPPRRLSLACLAIFLLLWAAAATRHALLQSNAYDLGLFDQWIWLASQGLPPYSSMEGVHLLADHGAWALYLAAIP YHFHASVQWLLASQAAGLSLTALPLWWVGRQAGLTPKLCWLICTLWWLQPVVFNANLFDFHPEVWVMPALAACYWASRAK KAWLWFGLLLLLLGCRDGLVLVVVGLGLEQALRKRWIWAFAAIGLALGWLAMLNHWLYPWLKGSTGGPKAAGALFSYLGD SFDEVLFNLITKPQLLIEHVDWIGGLIYLLLISIAVAPFWRRNSLPVLMGGLPLVLVNLLSEESPQRTLIHHYSLPIAVI AVVAAIDGLAVRPKQAVPWRLLTWSTICWVALAKPWFFSGPYLERLNALTPSHEAIANIPSSSRLATTSYLAPHLSQRIA IDFPRRKGKSLDLESFDVLLLNPKDPGWGSSQKHQQKLLSKAKQAGWWCESWDNGLELCQRSEHKSIKQP
Sequences:
>Translated_470_residues MDTKACPPRRLSLACLAIFLLLWAAAATRHALLQSNAYDLGLFDQWIWLASQGLPPYSSMEGVHLLADHGAWALYLAAIP YHFHASVQWLLASQAAGLSLTALPLWWVGRQAGLTPKLCWLICTLWWLQPVVFNANLFDFHPEVWVMPALAACYWASRAK KAWLWFGLLLLLLGCRDGLVLVVVGLGLEQALRKRWIWAFAAIGLALGWLAMLNHWLYPWLKGSTGGPKAAGALFSYLGD SFDEVLFNLITKPQLLIEHVDWIGGLIYLLLISIAVAPFWRRNSLPVLMGGLPLVLVNLLSEESPQRTLIHHYSLPIAVI AVVAAIDGLAVRPKQAVPWRLLTWSTICWVALAKPWFFSGPYLERLNALTPSHEAIANIPSSSRLATTSYLAPHLSQRIA IDFPRRKGKSLDLESFDVLLLNPKDPGWGSSQKHQQKLLSKAKQAGWWCESWDNGLELCQRSEHKSIKQP >Mature_470_residues MDTKACPPRRLSLACLAIFLLLWAAAATRHALLQSNAYDLGLFDQWIWLASQGLPPYSSMEGVHLLADHGAWALYLAAIP YHFHASVQWLLASQAAGLSLTALPLWWVGRQAGLTPKLCWLICTLWWLQPVVFNANLFDFHPEVWVMPALAACYWASRAK KAWLWFGLLLLLLGCRDGLVLVVVGLGLEQALRKRWIWAFAAIGLALGWLAMLNHWLYPWLKGSTGGPKAAGALFSYLGD SFDEVLFNLITKPQLLIEHVDWIGGLIYLLLISIAVAPFWRRNSLPVLMGGLPLVLVNLLSEESPQRTLIHHYSLPIAVI AVVAAIDGLAVRPKQAVPWRLLTWSTICWVALAKPWFFSGPYLERLNALTPSHEAIANIPSSSRLATTSYLAPHLSQRIA IDFPRRKGKSLDLESFDVLLLNPKDPGWGSSQKHQQKLLSKAKQAGWWCESWDNGLELCQRSEHKSIKQP
Specific function: Unknown
COG id: COG3463
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52554; Mature: 52554
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTKACPPRRLSLACLAIFLLLWAAAATRHALLQSNAYDLGLFDQWIWLASQGLPPYSSM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC EGVHLLADHGAWALYLAAIPYHFHASVQWLLASQAAGLSLTALPLWWVGRQAGLTPKLCW CCEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCCCHHHHH LICTLWWLQPVVFNANLFDFHPEVWVMPALAACYWASRAKKAWLWFGLLLLLLGCRDGLV HHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LVVVGLGLEQALRKRWIWAFAAIGLALGWLAMLNHWLYPWLKGSTGGPKAAGALFSYLGD EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCHHHHHHHHHHCC SFDEVLFNLITKPQLLIEHVDWIGGLIYLLLISIAVAPFWRRNSLPVLMGGLPLVLVNLL CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHH SEESPQRTLIHHYSLPIAVIAVVAAIDGLAVRPKQAVPWRLLTWSTICWVALAKPWFFSG CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCC PYLERLNALTPSHEAIANIPSSSRLATTSYLAPHLSQRIAIDFPRRKGKSLDLESFDVLL HHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEE LNPKDPGWGSSQKHQQKLLSKAKQAGWWCESWDNGLELCQRSEHKSIKQP ECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDTKACPPRRLSLACLAIFLLLWAAAATRHALLQSNAYDLGLFDQWIWLASQGLPPYSSM CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC EGVHLLADHGAWALYLAAIPYHFHASVQWLLASQAAGLSLTALPLWWVGRQAGLTPKLCW CCEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCCCHHHHH LICTLWWLQPVVFNANLFDFHPEVWVMPALAACYWASRAKKAWLWFGLLLLLLGCRDGLV HHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LVVVGLGLEQALRKRWIWAFAAIGLALGWLAMLNHWLYPWLKGSTGGPKAAGALFSYLGD EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCHHHHHHHHHHCC SFDEVLFNLITKPQLLIEHVDWIGGLIYLLLISIAVAPFWRRNSLPVLMGGLPLVLVNLL CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHH SEESPQRTLIHHYSLPIAVIAVVAAIDGLAVRPKQAVPWRLLTWSTICWVALAKPWFFSG CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCC PYLERLNALTPSHEAIANIPSSSRLATTSYLAPHLSQRIAIDFPRRKGKSLDLESFDVLL HHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCEEE LNPKDPGWGSSQKHQQKLLSKAKQAGWWCESWDNGLELCQRSEHKSIKQP ECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA