| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864187
Identifier: 33864187
GI number: 33864187
Start: 2030214
End: 2031233
Strand: Reverse
Name: 33864187
Synonym: PMT1921
Alternate gene names: NA
Gene position: 2031233-2030214 (Counterclockwise)
Preceding gene: 33864188
Following gene: 33864186
Centisome position: 84.25
GC content: 51.27
Gene sequence:
>1020_bases TTGAGATATGAAGCACGCTTTTGGGTCTGTCGCCTGAGCTCAGGCTGGTTGTGTCCTCGATCTGGTTTTTATCGACTGTT TGAAGCCAGTCTCAAGTTGCATTTTTATCGGCGAGCAGCAGTCGTGGCCCATCTAGCGGCCTGTCGTCGCCCTGGGGATG CTGATGTGCAATCCATGCAGTGCACGCTGGCCTTTCGAGCGGGACAACTCGATCAGGCATTTTCTTTGTTGGTTCCTCGC TTGCAAGATGGCGATTATCGCGCCGTTGAGCGTCTGCTCTTTCGAACGGGATCGCGTCCGCAAGATGCACAGGATCGGCT TTTGGCTTTGGAGGGTTTGTCCACACTGCACGACTTGTTGCCGAGCCATCGTTGCTACTCGCTGATTGCTCAGAGCTATT TGGTGATCAAGCTGAGTGATACAGCGAAAGCATCATCATTACTTCTGTCTATTCATCCTCTTGTCAACCAGCTCGCTGCT GATGACGCTGTGTATGGATGCACAGCATCGAATCGGCGCAATCAGGCCAAACTTTTAATTTCCCTGTGTACCTGCTTTTA TCATCTTGCTGTGTTAGTGGGGAATGATCAGGCTCTCGCCTGGGTCTGGTCTGAGGTGATGGAGGTGGCTTCGAAGTTGC GTTATCCGCAGCTCAATGCCGATGCTTGTCTGCGCATGTCAAGCAATCTGTCGCGTTGTTTGGCAATTGGCGCCTTAATC CCTGCTTCCAATGTTCCTGATGCCATGGAACGGACGCAAACGGAGCTCCGTGTCGTTGAGGAGGCTGTTCGTCGTGATTG TCTCAGTCAGTCCGGGGATAGCTTCTCTAAAACTCAGGAAAATCACCTCGGTTTAATGGTGAACTTGCAAGAGTCTTTGC AGCAACTACGTAGTACGGATGTTGTCACGCGTGACATGGGCATTCGGCGCACATCCCAGTTGCTGAATCATTCTTCTTTC AAGGAATTGAATGCACTCTTGGCAAAGCGTCTTCAGCAGTGCCACGCATCAATGAACTGA
Upstream 100 bases:
>100_bases GAAGTGGAAGTGAGTCTGTTGATCCCTTTGCTTTCGATCTCGCCATCGGCAAGGAGATAAAGCTGTAATCATTCATGGCC TCAAAAGGCGTACTCAGCGC
Downstream 100 bases:
>100_bases TGACGGCGGCCTTGCCTGCTGGTAGCGATCTTGTGATCGTCTTGCCCCATCTGGGGCCAGGTGGAGCCCAGAAAGTGGCG TTGATGGCAGCGGAGCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MRYEARFWVCRLSSGWLCPRSGFYRLFEASLKLHFYRRAAVVAHLAACRRPGDADVQSMQCTLAFRAGQLDQAFSLLVPR LQDGDYRAVERLLFRTGSRPQDAQDRLLALEGLSTLHDLLPSHRCYSLIAQSYLVIKLSDTAKASSLLLSIHPLVNQLAA DDAVYGCTASNRRNQAKLLISLCTCFYHLAVLVGNDQALAWVWSEVMEVASKLRYPQLNADACLRMSSNLSRCLAIGALI PASNVPDAMERTQTELRVVEEAVRRDCLSQSGDSFSKTQENHLGLMVNLQESLQQLRSTDVVTRDMGIRRTSQLLNHSSF KELNALLAKRLQQCHASMN
Sequences:
>Translated_339_residues MRYEARFWVCRLSSGWLCPRSGFYRLFEASLKLHFYRRAAVVAHLAACRRPGDADVQSMQCTLAFRAGQLDQAFSLLVPR LQDGDYRAVERLLFRTGSRPQDAQDRLLALEGLSTLHDLLPSHRCYSLIAQSYLVIKLSDTAKASSLLLSIHPLVNQLAA DDAVYGCTASNRRNQAKLLISLCTCFYHLAVLVGNDQALAWVWSEVMEVASKLRYPQLNADACLRMSSNLSRCLAIGALI PASNVPDAMERTQTELRVVEEAVRRDCLSQSGDSFSKTQENHLGLMVNLQESLQQLRSTDVVTRDMGIRRTSQLLNHSSF KELNALLAKRLQQCHASMN >Mature_339_residues MRYEARFWVCRLSSGWLCPRSGFYRLFEASLKLHFYRRAAVVAHLAACRRPGDADVQSMQCTLAFRAGQLDQAFSLLVPR LQDGDYRAVERLLFRTGSRPQDAQDRLLALEGLSTLHDLLPSHRCYSLIAQSYLVIKLSDTAKASSLLLSIHPLVNQLAA DDAVYGCTASNRRNQAKLLISLCTCFYHLAVLVGNDQALAWVWSEVMEVASKLRYPQLNADACLRMSSNLSRCLAIGALI PASNVPDAMERTQTELRVVEEAVRRDCLSQSGDSFSKTQENHLGLMVNLQESLQQLRSTDVVTRDMGIRRTSQLLNHSSF KELNALLAKRLQQCHASMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38035; Mature: 38035
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYEARFWVCRLSSGWLCPRSGFYRLFEASLKLHFYRRAAVVAHLAACRRPGDADVQSMQ CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH CTLAFRAGQLDQAFSLLVPRLQDGDYRAVERLLFRTGSRPQDAQDRLLALEGLSTLHDLL EEEHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC PSHRCYSLIAQSYLVIKLSDTAKASSLLLSIHPLVNQLAADDAVYGCTASNRRNQAKLLI CCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHH SLCTCFYHLAVLVGNDQALAWVWSEVMEVASKLRYPQLNADACLRMSSNLSRCLAIGALI HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC PASNVPDAMERTQTELRVVEEAVRRDCLSQSGDSFSKTQENHLGLMVNLQESLQQLRSTD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEHHHHHHHHHHHH VVTRDMGIRRTSQLLNHSSFKELNALLAKRLQQCHASMN HHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRYEARFWVCRLSSGWLCPRSGFYRLFEASLKLHFYRRAAVVAHLAACRRPGDADVQSMQ CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH CTLAFRAGQLDQAFSLLVPRLQDGDYRAVERLLFRTGSRPQDAQDRLLALEGLSTLHDLL EEEHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC PSHRCYSLIAQSYLVIKLSDTAKASSLLLSIHPLVNQLAADDAVYGCTASNRRNQAKLLI CCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHH SLCTCFYHLAVLVGNDQALAWVWSEVMEVASKLRYPQLNADACLRMSSNLSRCLAIGALI HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC PASNVPDAMERTQTELRVVEEAVRRDCLSQSGDSFSKTQENHLGLMVNLQESLQQLRSTD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEEHHHHHHHHHHHH VVTRDMGIRRTSQLLNHSSFKELNALLAKRLQQCHASMN HHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA