| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864188
Identifier: 33864188
GI number: 33864188
Start: 2031266
End: 2032210
Strand: Reverse
Name: 33864188
Synonym: PMT1922
Alternate gene names: NA
Gene position: 2032210-2031266 (Counterclockwise)
Preceding gene: 33864189
Following gene: 33864187
Centisome position: 84.29
GC content: 48.47
Gene sequence:
>945_bases ATGCCACTGAAGCGACTCAATCGATTCAGACTTTGGCTTTGGGAAACACCACCCGTCTATGAAATTCGCGGACGTTGCTT TCAGATCAAAGAGCGTCTTTGTGGCTACCCAGAGTTACACCGAGCGTTTCGAGAACGAACTGGGTATGAGCTAAGTCTGC ATCATCCATGCACCTTTCACCACAAGATCACGGTTCTCAAAATTAGGCGATCTCCAAGGATTTTTGTTCGGGCTGTTGAT AAGATTTTTGCCAAAGAATTGGCGCTGGAGTGGGCTCATCAGCATGGGTTCCGTCTCTATGTTGCGCGCACTTTGGCTGT GACGAAAGATGTTTCAGAGATCCGTTGGCATGAACTTCCTCAACGCTTTCTGATTAAGGCCACCCATCGATCGGGCGCGA ATCTCTTTGTCGATCAGAGTCAAGCCTTTGATCTTGACGCGTTGCGCGTGCAATCAAGGGCATGGCTTCAATACCCCTAT GGTGTCTACAAGCATGAATGGGCGTACTGGCCAGTTCCGCGGCGTCTTCTGATTGAGGAACTGATTGAACCTGTGGATGG AGAGGAGCTGGTTGATTATAAGTTTCACATGAGTCGTGGGCGCTGTTTGATGATTCAGGTCAATCAGGGATTGCGCTCTG GTAAACGAACGATCGCAATACTTCATCCTTCATGGCAGCTTCAGCCTGTGAAATGGGTTTATCCTCAGCCTGAGGTCATA CCTCAGCGACCTGACACTTTTTATGAGATGCTGGAGATGGCTTCCGCTTTCTCTCGCGAATTTCCTTATTTGCGTGTGGA TCTTTATAGTGTCAAGCAGGTGATGTCTGGAGTGATGGTGTCTCGTGTGATGTTTGGAGAATTCACCTTTTTCCCTGGAA GTGGAAGTGAGTCTGTTGATCCCTTTGCTTTCGATCTCGCCATCGGCAAGGAGATAAAGCTGTAA
Upstream 100 bases:
>100_bases AGTGCAAAATGGGACCCTTGCCGAGATCTGTTCGACAAGCGTCTTAGCCAGTGTGCCGATGCCTGCGAATGACATCACGA CCTGGAGGGAACAGTGGCTT
Downstream 100 bases:
>100_bases TCATTCATGGCCTCAAAAGGCGTACTCAGCGCTTGAGATATGAAGCACGCTTTTGGGTCTGTCGCCTGAGCTCAGGCTGG TTGTGTCCTCGATCTGGTTT
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase; O Antigen Biosynthesis Protein; Sugar Transferase; Polysaccharide Biosynthesis Protein; Probably Glycosyltransferase
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPLKRLNRFRLWLWETPPVYEIRGRCFQIKERLCGYPELHRAFRERTGYELSLHHPCTFHHKITVLKIRRSPRIFVRAVD KIFAKELALEWAHQHGFRLYVARTLAVTKDVSEIRWHELPQRFLIKATHRSGANLFVDQSQAFDLDALRVQSRAWLQYPY GVYKHEWAYWPVPRRLLIEELIEPVDGEELVDYKFHMSRGRCLMIQVNQGLRSGKRTIAILHPSWQLQPVKWVYPQPEVI PQRPDTFYEMLEMASAFSREFPYLRVDLYSVKQVMSGVMVSRVMFGEFTFFPGSGSESVDPFAFDLAIGKEIKL
Sequences:
>Translated_314_residues MPLKRLNRFRLWLWETPPVYEIRGRCFQIKERLCGYPELHRAFRERTGYELSLHHPCTFHHKITVLKIRRSPRIFVRAVD KIFAKELALEWAHQHGFRLYVARTLAVTKDVSEIRWHELPQRFLIKATHRSGANLFVDQSQAFDLDALRVQSRAWLQYPY GVYKHEWAYWPVPRRLLIEELIEPVDGEELVDYKFHMSRGRCLMIQVNQGLRSGKRTIAILHPSWQLQPVKWVYPQPEVI PQRPDTFYEMLEMASAFSREFPYLRVDLYSVKQVMSGVMVSRVMFGEFTFFPGSGSESVDPFAFDLAIGKEIKL >Mature_313_residues PLKRLNRFRLWLWETPPVYEIRGRCFQIKERLCGYPELHRAFRERTGYELSLHHPCTFHHKITVLKIRRSPRIFVRAVDK IFAKELALEWAHQHGFRLYVARTLAVTKDVSEIRWHELPQRFLIKATHRSGANLFVDQSQAFDLDALRVQSRAWLQYPYG VYKHEWAYWPVPRRLLIEELIEPVDGEELVDYKFHMSRGRCLMIQVNQGLRSGKRTIAILHPSWQLQPVKWVYPQPEVIP QRPDTFYEMLEMASAFSREFPYLRVDLYSVKQVMSGVMVSRVMFGEFTFFPGSGSESVDPFAFDLAIGKEIKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37227; Mature: 37096
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLKRLNRFRLWLWETPPVYEIRGRCFQIKERLCGYPELHRAFRERTGYELSLHHPCTFH CCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCEEEC HKITVLKIRRSPRIFVRAVDKIFAKELALEWAHQHGFRLYVARTLAVTKDVSEIRWHELP CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCC QRFLIKATHRSGANLFVDQSQAFDLDALRVQSRAWLQYPYGVYKHEWAYWPVPRRLLIEE HHHEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHEECCCCCEECCCEECCCCHHHHHHH LIEPVDGEELVDYKFHMSRGRCLMIQVNQGLRSGKRTIAILHPSWQLQPVKWVYPQPEVI HHCCCCCCHHEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCEEEECCCCCCC PQRPDTFYEMLEMASAFSREFPYLRVDLYSVKQVMSGVMVSRVMFGEFTFFPGSGSESVD CCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCC PFAFDLAIGKEIKL CEEEEEECCCCCCC >Mature Secondary Structure PLKRLNRFRLWLWETPPVYEIRGRCFQIKERLCGYPELHRAFRERTGYELSLHHPCTFH CHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCCEEEC HKITVLKIRRSPRIFVRAVDKIFAKELALEWAHQHGFRLYVARTLAVTKDVSEIRWHELP CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCC QRFLIKATHRSGANLFVDQSQAFDLDALRVQSRAWLQYPYGVYKHEWAYWPVPRRLLIEE HHHEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHEECCCCCEECCCEECCCCHHHHHHH LIEPVDGEELVDYKFHMSRGRCLMIQVNQGLRSGKRTIAILHPSWQLQPVKWVYPQPEVI HHCCCCCCHHEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCEEEECCCCCCC PQRPDTFYEMLEMASAFSREFPYLRVDLYSVKQVMSGVMVSRVMFGEFTFFPGSGSESVD CCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCC PFAFDLAIGKEIKL CEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA