| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864184
Identifier: 33864184
GI number: 33864184
Start: 2025259
End: 2026500
Strand: Direct
Name: 33864184
Synonym: PMT1918
Alternate gene names: NA
Gene position: 2025259-2026500 (Clockwise)
Preceding gene: 33864179
Following gene: 33864185
Centisome position: 84.01
GC content: 48.95
Gene sequence:
>1242_bases ATGCACCGCAACCGCCTGATCCGGTTCGCACATGAAACAAGGCCGGTTGATGCTCTTTTCGCCGCCAGTCTTTTTCTCGG ACTTGAACGAAGTCACCACGCATGGACGCTGGGCCTGCTGACCGCCTGGATCGGCCTTCGATGCTGCATACAAATATTTC ATGATCGGAATCAAAGGAATTGGCGACAACAGAACCTCTTTCAGATTGTGATCTCGAGCCTTGTTTTTTTTCAGGCAAGA ACAATCATCCGGCTTGACGACCATCCAGGTGCTTCCTTTTACATCTTGATCGTCGCCGCTCTTAGCGTCGGAGCTACTTA TCTCATTGACGACTGGACACGCCTTCTGCGCTGGATCAGCTGCTCGGCCTTATTTATCAATACAAAATTGATCTGGATTG CTTCTTCGGGATACCCAGCTGGAAGTAGCGACAATTGGCTTACCGCAGTCAATAATCAAATTTTCGAACTAGGATTTGGA AGAGTAAATGCATTGGCATCCGTTATTGCACTCACCACAATTCTCTGTTTTTACGGTTTAAGGAGAGATCGTCAGCCAAT CGCAAAGGTAATTCATACCCTGGGGTGCATCAGCGGTTATGGACTTTGCCTACAGACAGGCTCACGCATGGCAGCTGGAG TGCCCCTAATCGCAGCCATGGCAGCATTCGCCATTTGCATCAAGGATTACATTCCAAATCGCTCAGCTCGACGCATACAA ACATGGATTACTTCAGCCACGGCTGGGTTGATCGCCGCCGCTATTTGGGCCACTGCAATTCAGCCTGATATAGGAGTAGG AATGGCCAGCGAAAAACTCAGACTGAGCTTCTGGCAATGCTGGCTTCAAAATTCTATTTTTGCAGGGAATGGAAAGATCG TCCATGGCATTGGATACAACCTGGAAAACATGGTTAATGCCTGCAACAATCAATCTGCAGACAGCGGCCTAATCCAATTA ATCGGACAGCATGGTCTATTGGGTCTACTTGCCATAGGACTATTACTAACTCTTTTAATCCGCAGTCTTTTGAGTCAACG CACGGAGGACAGGAAGTCGATCACACACCCATGCCGACTGCACTGCTCCTGGTCCGAGGCAGGGATGGGAAGCCTGTTGA CAGTCTTACTCTGCAATTTGACAACGCCCGCTTATCTAGGAAGCTTTGTAGGAGCCGCACTGACCGGCCTTGCACTTTCA ATGAGCCTGGTCCGAACCGATTCCGAAACAACTGTTAAATAG
Upstream 100 bases:
>100_bases CCACCGCCCTTCGCTGAGCGTCATTGAGGCCAGCCAGGAAACTCATCAAACATCCGATTTGGGCTCACCTTAAATTCGGT ATTACCAAAACAGGGAAGGA
Downstream 100 bases:
>100_bases AAATGTCAAAGTCAAAACATCCATTAATTGTCTGGATGGCAAGCTTTTTTGCTGCCCTGCTGACCCTTGCATTTGTCGCT CACCAATGGGTCGAAGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MHRNRLIRFAHETRPVDALFAASLFLGLERSHHAWTLGLLTAWIGLRCCIQIFHDRNQRNWRQQNLFQIVISSLVFFQAR TIIRLDDHPGASFYILIVAALSVGATYLIDDWTRLLRWISCSALFINTKLIWIASSGYPAGSSDNWLTAVNNQIFELGFG RVNALASVIALTTILCFYGLRRDRQPIAKVIHTLGCISGYGLCLQTGSRMAAGVPLIAAMAAFAICIKDYIPNRSARRIQ TWITSATAGLIAAAIWATAIQPDIGVGMASEKLRLSFWQCWLQNSIFAGNGKIVHGIGYNLENMVNACNNQSADSGLIQL IGQHGLLGLLAIGLLLTLLIRSLLSQRTEDRKSITHPCRLHCSWSEAGMGSLLTVLLCNLTTPAYLGSFVGAALTGLALS MSLVRTDSETTVK
Sequences:
>Translated_413_residues MHRNRLIRFAHETRPVDALFAASLFLGLERSHHAWTLGLLTAWIGLRCCIQIFHDRNQRNWRQQNLFQIVISSLVFFQAR TIIRLDDHPGASFYILIVAALSVGATYLIDDWTRLLRWISCSALFINTKLIWIASSGYPAGSSDNWLTAVNNQIFELGFG RVNALASVIALTTILCFYGLRRDRQPIAKVIHTLGCISGYGLCLQTGSRMAAGVPLIAAMAAFAICIKDYIPNRSARRIQ TWITSATAGLIAAAIWATAIQPDIGVGMASEKLRLSFWQCWLQNSIFAGNGKIVHGIGYNLENMVNACNNQSADSGLIQL IGQHGLLGLLAIGLLLTLLIRSLLSQRTEDRKSITHPCRLHCSWSEAGMGSLLTVLLCNLTTPAYLGSFVGAALTGLALS MSLVRTDSETTVK >Mature_413_residues MHRNRLIRFAHETRPVDALFAASLFLGLERSHHAWTLGLLTAWIGLRCCIQIFHDRNQRNWRQQNLFQIVISSLVFFQAR TIIRLDDHPGASFYILIVAALSVGATYLIDDWTRLLRWISCSALFINTKLIWIASSGYPAGSSDNWLTAVNNQIFELGFG RVNALASVIALTTILCFYGLRRDRQPIAKVIHTLGCISGYGLCLQTGSRMAAGVPLIAAMAAFAICIKDYIPNRSARRIQ TWITSATAGLIAAAIWATAIQPDIGVGMASEKLRLSFWQCWLQNSIFAGNGKIVHGIGYNLENMVNACNNQSADSGLIQL IGQHGLLGLLAIGLLLTLLIRSLLSQRTEDRKSITHPCRLHCSWSEAGMGSLLTVLLCNLTTPAYLGSFVGAALTGLALS MSLVRTDSETTVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45358; Mature: 45358
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRNRLIRFAHETRPVDALFAASLFLGLERSHHAWTLGLLTAWIGLRCCIQIFHDRNQRN CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH WRQQNLFQIVISSLVFFQARTIIRLDDHPGASFYILIVAALSVGATYLIDDWTRLLRWIS HHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH CSALFINTKLIWIASSGYPAGSSDNWLTAVNNQIFELGFGRVNALASVIALTTILCFYGL HHEEEEEEEEEEEEECCCCCCCCCCEEEHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH RRDRQPIAKVIHTLGCISGYGLCLQTGSRMAAGVPLIAAMAAFAICIKDYIPNRSARRIQ CCCCHHHHHHHHHHHHHHHCHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHH TWITSATAGLIAAAIWATAIQPDIGVGMASEKLRLSFWQCWLQNSIFAGNGKIVHGIGYN HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCEEEECCCC LENMVNACNNQSADSGLIQLIGQHGLLGLLAIGLLLTLLIRSLLSQRTEDRKSITHPCRL HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE HCSWSEAGMGSLLTVLLCNLTTPAYLGSFVGAALTGLALSMSLVRTDSETTVK EECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHRNRLIRFAHETRPVDALFAASLFLGLERSHHAWTLGLLTAWIGLRCCIQIFHDRNQRN CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH WRQQNLFQIVISSLVFFQARTIIRLDDHPGASFYILIVAALSVGATYLIDDWTRLLRWIS HHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH CSALFINTKLIWIASSGYPAGSSDNWLTAVNNQIFELGFGRVNALASVIALTTILCFYGL HHEEEEEEEEEEEEECCCCCCCCCCEEEHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH RRDRQPIAKVIHTLGCISGYGLCLQTGSRMAAGVPLIAAMAAFAICIKDYIPNRSARRIQ CCCCHHHHHHHHHHHHHHHCHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHH TWITSATAGLIAAAIWATAIQPDIGVGMASEKLRLSFWQCWLQNSIFAGNGKIVHGIGYN HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCEEEECCCC LENMVNACNNQSADSGLIQLIGQHGLLGLLAIGLLLTLLIRSLLSQRTEDRKSITHPCRL HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE HCSWSEAGMGSLLTVLLCNLTTPAYLGSFVGAALTGLALSMSLVRTDSETTVK EECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA