| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864185
Identifier: 33864185
GI number: 33864185
Start: 2026503
End: 2028305
Strand: Direct
Name: 33864185
Synonym: PMT1919
Alternate gene names: NA
Gene position: 2026503-2028305 (Clockwise)
Preceding gene: 33864184
Following gene: 33864191
Centisome position: 84.06
GC content: 42.15
Gene sequence:
>1803_bases ATGTCAAAGTCAAAACATCCATTAATTGTCTGGATGGCAAGCTTTTTTGCTGCCCTGCTGACCCTTGCATTTGTCGCTCA CCAATGGGTCGAAGCAAATCGCGACCTCTGGCCCAATCCACGATCAGAGGAAGGGCTAGCCATAACCTTGAATTACAACA TAGTCAGTCATGCTCTTTTCTTATTGGCTCTGGCAGCAATACTGGCCTGGCTGCTGAATCAAACACGTCAGAAAGCATCC AGAGATCCGCATTCGTCGCGAGGCAAACCACTCAAGAGGCAAAGAGCATGGAAAGCAGTATCTCAGCACCCATTTGCCAC GGTGATTTTCACCGCTTGCGCCATTTTCATGGTGAGCGAAGCCAGCTGGTTTTATAAAGAAATCATCGGCTGGTTTGACG ATATCCAGGCAGGCTACCTGCTTGATAATTTCTCGTTACGAATGAATCTATTTCGAGAAACTATGTCTCGAAACGATTTT CGCTTTTACCCCTTGGCCTTCCAGGACCTACAAATTCTCAGTTGGTTAACACCATATCCAAAGATCTGGATGATTTTCAA TGTAGCACAAATGATCGCCACAGTAATACTTGGTGCCAAAATTGCTGATCTCACCGTGAAGCATAAACAAGGGCGCGAAG CAATCGCGATGTTTGCAATTTTATTTATATTCATAGCCCCAAGTGCCTACAGTTATTTTCAATTTATTTACAGCGAGCGT ATTGTGACTCTTTTATTTGCTGGCCACCTATATGCCTACATAAATTATAAACTTAAAAAGCAAATTCTATCACGAAATGC CGCGATCGCCTGCGCCTTAATTGGAATTTTCTTCAAAGACACCGCAATACTTTTATTTCTTTCACCTGCAGCAGTAACGC TTGCGCTGGGCAATATAGGCCTAGTAACAAACATGCCTAAGCCCAGCGAAACTTCATTTAAAGGTTGGATTTCAGCGTAC AAAGCAGAACTAGCAATTATGAGCCTGGCTCTATTCTTTATAATATGCTTTGCATACTTAAGCTACCTGCCTAGCTTATA TGTAGGCGGAGATCGCTACGACGCTGAACTAAAATTTGTACGTTTTGTGCCAGATTTACGCCTCTTCATTCTTTCCATCT ATACAGCGATTAGGTCTTTTCAAATTCTCAAGAAAAAGGAGACTCCAAATCCAGTCGACGGCGCAAATTTCGGAGCACTT GCATATGTATTCGCTCTTTATTACTTTGTTGGATACCGCTCCAGCAACTATATGGCACTGCCAATGCATTTTGTTGCTGT CATCGACATCCTCATTGCATGGCAATCCTGCATCAAGCCATGGTTAGAGAAAAGAATTGGTCCTAACAAAACAAGTTTTG CAGGAACATTTTTAAGTGTTGCAATTATTTACGGTGAGCATATGTTTCCAAACACTTTTTATCACCGCATCAAAGATATG ACCATGACACAGCGCTCATGGGCAGCAACATACAAAAAATCTGATGAAATCTTGCGCGCCGCACGCGAAACAGGCCAACC AGTGAACGTTATTTTCTCCAAATCATGGTTCCGGCGATTCAGTCACTTAAAACAATTGAAATATGATCGACTTATTTACC TCAACGAAGATACAAAAGAATATTTAATCGTTGACGGAGTTGGCAAGGGTGGCTTCCATCAACCACAAATAGGTGATTTT TTCTTAGACCTTGATACTGGTCGCCACCGGATAAAAGAATTTGGCATCAATATTGACGGATTTGTGCCCATTTACGAATA CGCAGAAAATCTCAAGAACGGCAGAATTTATATAAAGCGCTAA
Upstream 100 bases:
>100_bases CGCCCGCTTATCTAGGAAGCTTTGTAGGAGCCGCACTGACCGGCCTTGCACTTTCAATGAGCCTGGTCCGAACCGATTCC GAAACAACTGTTAAATAGAA
Downstream 100 bases:
>100_bases AAGGTTGATTTAAATCACTTGCTTCATGTTCAATCATAGATTGGCTTTAAAAAGTGCACTTAGCATCAACAACTTATTCA TAAACAATTTACTTGCACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MSKSKHPLIVWMASFFAALLTLAFVAHQWVEANRDLWPNPRSEEGLAITLNYNIVSHALFLLALAAILAWLLNQTRQKAS RDPHSSRGKPLKRQRAWKAVSQHPFATVIFTACAIFMVSEASWFYKEIIGWFDDIQAGYLLDNFSLRMNLFRETMSRNDF RFYPLAFQDLQILSWLTPYPKIWMIFNVAQMIATVILGAKIADLTVKHKQGREAIAMFAILFIFIAPSAYSYFQFIYSER IVTLLFAGHLYAYINYKLKKQILSRNAAIACALIGIFFKDTAILLFLSPAAVTLALGNIGLVTNMPKPSETSFKGWISAY KAELAIMSLALFFIICFAYLSYLPSLYVGGDRYDAELKFVRFVPDLRLFILSIYTAIRSFQILKKKETPNPVDGANFGAL AYVFALYYFVGYRSSNYMALPMHFVAVIDILIAWQSCIKPWLEKRIGPNKTSFAGTFLSVAIIYGEHMFPNTFYHRIKDM TMTQRSWAATYKKSDEILRAARETGQPVNVIFSKSWFRRFSHLKQLKYDRLIYLNEDTKEYLIVDGVGKGGFHQPQIGDF FLDLDTGRHRIKEFGINIDGFVPIYEYAENLKNGRIYIKR
Sequences:
>Translated_600_residues MSKSKHPLIVWMASFFAALLTLAFVAHQWVEANRDLWPNPRSEEGLAITLNYNIVSHALFLLALAAILAWLLNQTRQKAS RDPHSSRGKPLKRQRAWKAVSQHPFATVIFTACAIFMVSEASWFYKEIIGWFDDIQAGYLLDNFSLRMNLFRETMSRNDF RFYPLAFQDLQILSWLTPYPKIWMIFNVAQMIATVILGAKIADLTVKHKQGREAIAMFAILFIFIAPSAYSYFQFIYSER IVTLLFAGHLYAYINYKLKKQILSRNAAIACALIGIFFKDTAILLFLSPAAVTLALGNIGLVTNMPKPSETSFKGWISAY KAELAIMSLALFFIICFAYLSYLPSLYVGGDRYDAELKFVRFVPDLRLFILSIYTAIRSFQILKKKETPNPVDGANFGAL AYVFALYYFVGYRSSNYMALPMHFVAVIDILIAWQSCIKPWLEKRIGPNKTSFAGTFLSVAIIYGEHMFPNTFYHRIKDM TMTQRSWAATYKKSDEILRAARETGQPVNVIFSKSWFRRFSHLKQLKYDRLIYLNEDTKEYLIVDGVGKGGFHQPQIGDF FLDLDTGRHRIKEFGINIDGFVPIYEYAENLKNGRIYIKR >Mature_599_residues SKSKHPLIVWMASFFAALLTLAFVAHQWVEANRDLWPNPRSEEGLAITLNYNIVSHALFLLALAAILAWLLNQTRQKASR DPHSSRGKPLKRQRAWKAVSQHPFATVIFTACAIFMVSEASWFYKEIIGWFDDIQAGYLLDNFSLRMNLFRETMSRNDFR FYPLAFQDLQILSWLTPYPKIWMIFNVAQMIATVILGAKIADLTVKHKQGREAIAMFAILFIFIAPSAYSYFQFIYSERI VTLLFAGHLYAYINYKLKKQILSRNAAIACALIGIFFKDTAILLFLSPAAVTLALGNIGLVTNMPKPSETSFKGWISAYK AELAIMSLALFFIICFAYLSYLPSLYVGGDRYDAELKFVRFVPDLRLFILSIYTAIRSFQILKKKETPNPVDGANFGALA YVFALYYFVGYRSSNYMALPMHFVAVIDILIAWQSCIKPWLEKRIGPNKTSFAGTFLSVAIIYGEHMFPNTFYHRIKDMT MTQRSWAATYKKSDEILRAARETGQPVNVIFSKSWFRRFSHLKQLKYDRLIYLNEDTKEYLIVDGVGKGGFHQPQIGDFF LDLDTGRHRIKEFGINIDGFVPIYEYAENLKNGRIYIKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68999; Mature: 68867
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSKHPLIVWMASFFAALLTLAFVAHQWVEANRDLWPNPRSEEGLAITLNYNIVSHALF CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHH LLALAAILAWLLNQTRQKASRDPHSSRGKPLKRQRAWKAVSQHPFATVIFTACAIFMVSE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ASWFYKEIIGWFDDIQAGYLLDNFSLRMNLFRETMSRNDFRFYPLAFQDLQILSWLTPYP HHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCC KIWMIFNVAQMIATVILGAKIADLTVKHKQGREAIAMFAILFIFIAPSAYSYFQFIYSER HHHHHHHHHHHHHHHHHCCHHHHEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IVTLLFAGHLYAYINYKLKKQILSRNAAIACALIGIFFKDTAILLFLSPAAVTLALGNIG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECCHHHHHEECCCC LVTNMPKPSETSFKGWISAYKAELAIMSLALFFIICFAYLSYLPSLYVGGDRYDAELKFV EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEE RFVPDLRLFILSIYTAIRSFQILKKKETPNPVDGANFGALAYVFALYYFVGYRSSNYMAL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEH PMHFVAVIDILIAWQSCIKPWLEKRIGPNKTSFAGTFLSVAIIYGEHMFPNTFYHRIKDM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TMTQRSWAATYKKSDEILRAARETGQPVNVIFSKSWFRRFSHLKQLKYDRLIYLNEDTKE HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCEEEEECCCCCC YLIVDGVGKGGFHQPQIGDFFLDLDTGRHRIKEFGINIDGFVPIYEYAENLKNGRIYIKR EEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEC >Mature Secondary Structure SKSKHPLIVWMASFFAALLTLAFVAHQWVEANRDLWPNPRSEEGLAITLNYNIVSHALF CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHH LLALAAILAWLLNQTRQKASRDPHSSRGKPLKRQRAWKAVSQHPFATVIFTACAIFMVSE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ASWFYKEIIGWFDDIQAGYLLDNFSLRMNLFRETMSRNDFRFYPLAFQDLQILSWLTPYP HHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCC KIWMIFNVAQMIATVILGAKIADLTVKHKQGREAIAMFAILFIFIAPSAYSYFQFIYSER HHHHHHHHHHHHHHHHHCCHHHHEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IVTLLFAGHLYAYINYKLKKQILSRNAAIACALIGIFFKDTAILLFLSPAAVTLALGNIG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECCHHHHHEECCCC LVTNMPKPSETSFKGWISAYKAELAIMSLALFFIICFAYLSYLPSLYVGGDRYDAELKFV EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEE RFVPDLRLFILSIYTAIRSFQILKKKETPNPVDGANFGALAYVFALYYFVGYRSSNYMAL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEH PMHFVAVIDILIAWQSCIKPWLEKRIGPNKTSFAGTFLSVAIIYGEHMFPNTFYHRIKDM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TMTQRSWAATYKKSDEILRAARETGQPVNVIFSKSWFRRFSHLKQLKYDRLIYLNEDTKE HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCEEEEECCCCCC YLIVDGVGKGGFHQPQIGDFFLDLDTGRHRIKEFGINIDGFVPIYEYAENLKNGRIYIKR EEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA