| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864181
Identifier: 33864181
GI number: 33864181
Start: 2020605
End: 2021318
Strand: Reverse
Name: 33864181
Synonym: PMT1915
Alternate gene names: NA
Gene position: 2021318-2020605 (Counterclockwise)
Preceding gene: 33864182
Following gene: 33864180
Centisome position: 83.84
GC content: 53.36
Gene sequence:
>714_bases ATGACCAAGCCGATACCGATTTATATCGGTTACGACCCGCGTGAAAGAGCTGCGACCAATGTTTTGATCGACAGCCTTTA CCAGCACAGCTCGATGCCGCTGGCAATAACCCCTTTGGTCACTCCTCAGCTGGAAGGCCAGGGCTTGTTTCGGCGGGAGC GCGATCCGAAGCAAAGCACGGCATTTTCCTTCACGAGGTTTCTTGTGCCGAAGCTCATGGGTTATCAAGACTGGGCGATT TTTATGGACTGCGACATGCTCTGCCGTGGTGATATCGCGGAGCTATGGGCCCAGCGCGATGAACAGATGGCCGTGATGTG CGTTAAGCATGAGCATGAGCCAGGAGAAACGAAGAAATTCTTGGGTGAGGTTCAGAGCCCCTACCCGAAAAAGAACTGGA GCTCGCTAATGATGCTGAATTGCAGTCGTTGCACCGCTCTAACCGTCGATTATGTGAGTACGGCCACGGGGCTTGATTTG CATCGTTTCCACTGGCTTGCTGGTGATCATGAGATTGGAGCCATTGAGGGTGGGCTTTGGAACCACTTGGTTGGTGTTCA GGAGGATCCTGAGCTTTCAGTTGGGCAGTCACGACCCCAGTTACTGCATTGGACTTTGGGTGGACCATGGTTCCGCGAAC AGCGCACGATGGGTGGTGCCTTGGCGGCTGAATGGTTTAGTGCTCGTGATGATGCGATGAAGCTATGGGATTAA
Upstream 100 bases:
>100_bases TTGAATTTTGTTGCGCCTGATTCGGCTTGGGTTTCTGCACCATTGAGTTGGTAAGATGAGAAAGGTCTACGCTCATTTTC ATGAGCGAAACATTTGAGTC
Downstream 100 bases:
>100_bases TGCCGATGGGAGTTCAACGCAGTGTCGTGGCCGTGCCTGCAAGGCTTGAATCATCGCGATTGCCCAATAAGGTTCTGGCA GATATCGGCGGGATGCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTKPIPIYIGYDPRERAATNVLIDSLYQHSSMPLAITPLVTPQLEGQGLFRRERDPKQSTAFSFTRFLVPKLMGYQDWAI FMDCDMLCRGDIAELWAQRDEQMAVMCVKHEHEPGETKKFLGEVQSPYPKKNWSSLMMLNCSRCTALTVDYVSTATGLDL HRFHWLAGDHEIGAIEGGLWNHLVGVQEDPELSVGQSRPQLLHWTLGGPWFREQRTMGGALAAEWFSARDDAMKLWD
Sequences:
>Translated_237_residues MTKPIPIYIGYDPRERAATNVLIDSLYQHSSMPLAITPLVTPQLEGQGLFRRERDPKQSTAFSFTRFLVPKLMGYQDWAI FMDCDMLCRGDIAELWAQRDEQMAVMCVKHEHEPGETKKFLGEVQSPYPKKNWSSLMMLNCSRCTALTVDYVSTATGLDL HRFHWLAGDHEIGAIEGGLWNHLVGVQEDPELSVGQSRPQLLHWTLGGPWFREQRTMGGALAAEWFSARDDAMKLWD >Mature_236_residues TKPIPIYIGYDPRERAATNVLIDSLYQHSSMPLAITPLVTPQLEGQGLFRRERDPKQSTAFSFTRFLVPKLMGYQDWAIF MDCDMLCRGDIAELWAQRDEQMAVMCVKHEHEPGETKKFLGEVQSPYPKKNWSSLMMLNCSRCTALTVDYVSTATGLDLH RFHWLAGDHEIGAIEGGLWNHLVGVQEDPELSVGQSRPQLLHWTLGGPWFREQRTMGGALAAEWFSARDDAMKLWD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27030; Mature: 26899
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPIPIYIGYDPRERAATNVLIDSLYQHSSMPLAITPLVTPQLEGQGLFRRERDPKQST CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHCCCCCCHHH AFSFTRFLVPKLMGYQDWAIFMDCDMLCRGDIAELWAQRDEQMAVMCVKHEHEPGETKKF HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCHHHHH LGEVQSPYPKKNWSSLMMLNCSRCTALTVDYVSTATGLDLHRFHWLAGDHEIGAIEGGLW HHHHCCCCCCCCCCEEEEEECCCCEEEEEEHHHHCCCCCHHHEEEECCCCCCEEECCCHH NHLVGVQEDPELSVGQSRPQLLHWTLGGPWFREQRTMGGALAAEWFSARDDAMKLWD HHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure TKPIPIYIGYDPRERAATNVLIDSLYQHSSMPLAITPLVTPQLEGQGLFRRERDPKQST CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHCCCCCCHHH AFSFTRFLVPKLMGYQDWAIFMDCDMLCRGDIAELWAQRDEQMAVMCVKHEHEPGETKKF HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCHHHHH LGEVQSPYPKKNWSSLMMLNCSRCTALTVDYVSTATGLDLHRFHWLAGDHEIGAIEGGLW HHHHCCCCCCCCCCEEEEEECCCCEEEEEEHHHHCCCCCHHHEEEECCCCCCEEECCCHH NHLVGVQEDPELSVGQSRPQLLHWTLGGPWFREQRTMGGALAAEWFSARDDAMKLWD HHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA