| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33864182
Identifier: 33864182
GI number: 33864182
Start: 2021995
End: 2022594
Strand: Reverse
Name: 33864182
Synonym: PMT1916
Alternate gene names: NA
Gene position: 2022594-2021995 (Counterclockwise)
Preceding gene: 33864183
Following gene: 33864181
Centisome position: 83.89
GC content: 56.17
Gene sequence:
>600_bases GTGTACTTGTGGCAGAACCGCGTGGAGCTGTCCGGTTTGGGGGCCTTTCTCGAATGGTTACCTGCACACGACCATTTCCC CCTTGTTGAAAAGTTGCAGCAGCTGCTTGCTGAAGTTGACCATCATGTCAAGCAGCAGGGGGATGCAATTGAGTGGATGG TGAAGTCCTATCAGGACGAAATGGTGTTGCCGTTTGTTGATGATCCGGCCCTTGAAATTCGTATTCTTTATCTCACCCGA GATGTACGTAGCTGGGCCCATTCCCGCTCCAGGGATGGTCGTCTCAAGAAGCATTGGCTACCTGGCCTGAAGCCGCTGCT GCGCTGGTGTCGGGTGAATGCTCGTCAGGACCGATTGCTGCAGGCCAGCGGTCGCCCGGTGTTTCGGCTCGGTTACGAGC AGTTGGCGCTTGACCCTGAGAGGAGTGTGCGGCGGCTCTGTGCCTGGCTGGAAATCCCTTTCGATGAGCAAAGGCTCCAG CCAACGCAACATTCCACGAGTCACATCCTTGCGGGCAACCAGATGAGTTTTGATGCCAACCGTGGGGCATCGATCCGTTG CAAGGGTGCTTGGATGGGGCACTCGTCGAGTTTGGTTTAG
Upstream 100 bases:
>100_bases TCGGACTAGGAGAGGCTCTATGCATTTTGCGGACTCCTTCACCAGGTGAAGAGCAACGTGGTCCTGCTCGTCTTAGGGCT GAATTCCGTCATCAGCGTTT
Downstream 100 bases:
>100_bases CTGGCCTTGCTGTTGCCATGGGTGAGGCAATTAAATCAGAGACTTGTGTATTCAAAAGATCATTAGTTGAATAACTAGAG TGGATCGATATGAAGATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MYLWQNRVELSGLGAFLEWLPAHDHFPLVEKLQQLLAEVDHHVKQQGDAIEWMVKSYQDEMVLPFVDDPALEIRILYLTR DVRSWAHSRSRDGRLKKHWLPGLKPLLRWCRVNARQDRLLQASGRPVFRLGYEQLALDPERSVRRLCAWLEIPFDEQRLQ PTQHSTSHILAGNQMSFDANRGASIRCKGAWMGHSSSLV
Sequences:
>Translated_199_residues MYLWQNRVELSGLGAFLEWLPAHDHFPLVEKLQQLLAEVDHHVKQQGDAIEWMVKSYQDEMVLPFVDDPALEIRILYLTR DVRSWAHSRSRDGRLKKHWLPGLKPLLRWCRVNARQDRLLQASGRPVFRLGYEQLALDPERSVRRLCAWLEIPFDEQRLQ PTQHSTSHILAGNQMSFDANRGASIRCKGAWMGHSSSLV >Mature_199_residues MYLWQNRVELSGLGAFLEWLPAHDHFPLVEKLQQLLAEVDHHVKQQGDAIEWMVKSYQDEMVLPFVDDPALEIRILYLTR DVRSWAHSRSRDGRLKKHWLPGLKPLLRWCRVNARQDRLLQASGRPVFRLGYEQLALDPERSVRRLCAWLEIPFDEQRLQ PTQHSTSHILAGNQMSFDANRGASIRCKGAWMGHSSSLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23185; Mature: 23185
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLWQNRVELSGLGAFLEWLPAHDHFPLVEKLQQLLAEVDHHVKQQGDAIEWMVKSYQDE CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC MVLPFVDDPALEIRILYLTRDVRSWAHSRSRDGRLKKHWLPGLKPLLRWCRVNARQDRLL EEEEECCCCCEEEEEEEEEHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCCHHHHHH QASGRPVFRLGYEQLALDPERSVRRLCAWLEIPFDEQRLQPTQHSTSHILAGNQMSFDAN HCCCCCEEEECHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEECCCCCCCCC RGASIRCKGAWMGHSSSLV CCCEEEEEEEECCCCCCCC >Mature Secondary Structure MYLWQNRVELSGLGAFLEWLPAHDHFPLVEKLQQLLAEVDHHVKQQGDAIEWMVKSYQDE CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC MVLPFVDDPALEIRILYLTRDVRSWAHSRSRDGRLKKHWLPGLKPLLRWCRVNARQDRLL EEEEECCCCCEEEEEEEEEHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCCHHHHHH QASGRPVFRLGYEQLALDPERSVRRLCAWLEIPFDEQRLQPTQHSTSHILAGNQMSFDAN HCCCCCEEEECHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEECCCCCCCCC RGASIRCKGAWMGHSSSLV CCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA