Click here to switch to the map view.

The map label for this gene is 33864172

Identifier: 33864172

GI number: 33864172

Start: 2010195

End: 2010548

Strand: Reverse

Name: 33864172

Synonym: PMT1906

Alternate gene names: NA

Gene position: 2010548-2010195 (Counterclockwise)

Preceding gene: 33864176

Following gene: 161350040

Centisome position: 83.4

GC content: 53.67

Gene sequence:

>354_bases
ATGGCCAGGACTCCGCCAGTGATGAATACAGCAGCAGAGGCCACCACCATCAGTCAGTTGTTGAGATCAGTTAACGCATC
ATTGTCTATCAGGATTCTTCTTGTGAGCGGTACTTTCCATAGGAGTCCTGCTCAGGGCTTTTTGGGCGTAAGGGGCTCAA
GGTGGTGCCATTCCCTGTTGATTTCAAGGCTTGCTGGGCTTGGGCAGATCGCTTGTGGCTTGATCCGTTGTGGTGGTTGC
CAGCGACCGGCATCCTCGCCAATAGGTCAGGGGCATTGCGCAACTTGTTTGGTTGCCTCGTTTATTGAGCTTGGTGATCA
CTGGCCCGGCAGACTGCCTACTGGTTGTTGGTGA

Upstream 100 bases:

>100_bases
ATTTGCGCATCAATCGTTTGCCTCTGGGATTGAGCCTCATTCAATTGCTTGTTGGCGTGGTAATTCTCTGGTGCTTTTTT
AGGCCCACATTGGTACCGCA

Downstream 100 bases:

>100_bases
AGAGTGACTCAGCTGCAGAGCCTGCGAGGAATGGTGGATCTATTACCGGAACAGACGAGGTGCTGGCAGGCGGTAGAAAG
CGTTGCGCGAGATCACTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MARTPPVMNTAAEATTISQLLRSVNASLSIRILLVSGTFHRSPAQGFLGVRGSRWCHSLLISRLAGLGQIACGLIRCGGC
QRPASSPIGQGHCATCLVASFIELGDHWPGRLPTGCW

Sequences:

>Translated_117_residues
MARTPPVMNTAAEATTISQLLRSVNASLSIRILLVSGTFHRSPAQGFLGVRGSRWCHSLLISRLAGLGQIACGLIRCGGC
QRPASSPIGQGHCATCLVASFIELGDHWPGRLPTGCW
>Mature_116_residues
ARTPPVMNTAAEATTISQLLRSVNASLSIRILLVSGTFHRSPAQGFLGVRGSRWCHSLLISRLAGLGQIACGLIRCGGCQ
RPASSPIGQGHCATCLVASFIELGDHWPGRLPTGCW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12354; Mature: 12222

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTPPVMNTAAEATTISQLLRSVNASLSIRILLVSGTFHRSPAQGFLGVRGSRWCHSLL
CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH
ISRLAGLGQIACGLIRCGGCQRPASSPIGQGHCATCLVASFIELGDHWPGRLPTGCW
HHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ARTPPVMNTAAEATTISQLLRSVNASLSIRILLVSGTFHRSPAQGFLGVRGSRWCHSLL
CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH
ISRLAGLGQIACGLIRCGGCQRPASSPIGQGHCATCLVASFIELGDHWPGRLPTGCW
HHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA