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The map label for this gene is 33864144

Identifier: 33864144

GI number: 33864144

Start: 1983299

End: 1984072

Strand: Direct

Name: 33864144

Synonym: PMT1878

Alternate gene names: NA

Gene position: 1983299-1984072 (Clockwise)

Preceding gene: 33864143

Following gene: 33864149

Centisome position: 82.26

GC content: 44.7

Gene sequence:

>774_bases
ATGTTGGTTGATGGCAACTATTACAAGAAAGGTGGCTCTACAGAAATAGAACTAGGAGGTACAGCCGGTGGATGGTGGAA
ATTTGCAGAATTCGATCGGATTGAGATTACTGGCGATCTAGAACTTGCCGGGGATTTACGTGTCTTAGCGATCAATTATT
TCCAGCTTTCTGCTGGTGATTCATTTGTAATTACTAGAGTTGATGGAGATCTCGATGGTCAATATGATGGTCTCAATGAG
GGAGATTCAGTCGGGAGTTTTGAAAGTGATAACAGTGGCATCCTTGAGCTCTTCATTACCTACAAAGGTGGTGATGGCAA
TGATATTGAGCTGTATACGGAATCAGTCTCTGGTGTTCTTCCTGAGAGCTTGCGTGAGCCAAGAATCATTGGTTCTGCTG
CTGATGATTCCTTAACTGGAACCTCTGCAGATGAAGTGATCTTTGGTGGTAGTGGTGATGATGTTTTGCTAGGAGGCGGT
GGAGATAATCAAGTTACTGGAGGAAATGGCGATGATCGGCTATATGGTGGTTTCGGTGATGACATTCTCAAAGGTGATCG
AGGCGCTGATACCTACAGGCTGAGTCGTGGTAATGATGTGATCATCGCCTTTTCACTCGCTGAAAACGATCGCATCTCTG
TAGCAGATGGAGTGGACCTTTCCTTTAAGCAAGTTGGTGATGATCTATTGATCACAGCAGATGGCATTCACACCACCTTG
AAGGATGTTGATAAGGGTGAGTTTCTCGCCGCTGATGTGATTGACTTTATCTAG

Upstream 100 bases:

>100_bases
CTTTAGTAATAATGGAACAAATCAAGGCTCCGACAAAATTCTAGGCAGTTGGCAAGACTATGGAACTCTCAAACCTGGAA
ATTCCTAAGCCGCAGCTAGA

Downstream 100 bases:

>100_bases
TCAACCAACCAAATCCTGAAGCTCAGAGCGAACAAATTCCAAATAAGCTTGGAATTTGTTCGCCAATCAACACCCTAAAC
TCAATCAATCAATCAGCAGC

Product: hemolysin-type calcium-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MLVDGNYYKKGGSTEIELGGTAGGWWKFAEFDRIEITGDLELAGDLRVLAINYFQLSAGDSFVITRVDGDLDGQYDGLNE
GDSVGSFESDNSGILELFITYKGGDGNDIELYTESVSGVLPESLREPRIIGSAADDSLTGTSADEVIFGGSGDDVLLGGG
GDNQVTGGNGDDRLYGGFGDDILKGDRGADTYRLSRGNDVIIAFSLAENDRISVADGVDLSFKQVGDDLLITADGIHTTL
KDVDKGEFLAADVIDFI

Sequences:

>Translated_257_residues
MLVDGNYYKKGGSTEIELGGTAGGWWKFAEFDRIEITGDLELAGDLRVLAINYFQLSAGDSFVITRVDGDLDGQYDGLNE
GDSVGSFESDNSGILELFITYKGGDGNDIELYTESVSGVLPESLREPRIIGSAADDSLTGTSADEVIFGGSGDDVLLGGG
GDNQVTGGNGDDRLYGGFGDDILKGDRGADTYRLSRGNDVIIAFSLAENDRISVADGVDLSFKQVGDDLLITADGIHTTL
KDVDKGEFLAADVIDFI
>Mature_257_residues
MLVDGNYYKKGGSTEIELGGTAGGWWKFAEFDRIEITGDLELAGDLRVLAINYFQLSAGDSFVITRVDGDLDGQYDGLNE
GDSVGSFESDNSGILELFITYKGGDGNDIELYTESVSGVLPESLREPRIIGSAADDSLTGTSADEVIFGGSGDDVLLGGG
GDNQVTGGNGDDRLYGGFGDDILKGDRGADTYRLSRGNDVIIAFSLAENDRISVADGVDLSFKQVGDDLLITADGIHTTL
KDVDKGEFLAADVIDFI

Specific function: Unknown

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27154; Mature: 27154

Theoretical pI: Translated: 3.75; Mature: 3.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVDGNYYKKGGSTEIELGGTAGGWWKFAEFDRIEITGDLELAGDLRVLAINYFQLSAGD
CEECCCEECCCCCEEEEECCCCCCCEEECCCCEEEEEECEEECCCEEEEEEEEEEECCCC
SFVITRVDGDLDGQYDGLNEGDSVGSFESDNSGILELFITYKGGDGNDIELYTESVSGVL
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCC
PESLREPRIIGSAADDSLTGTSADEVIFGGSGDDVLLGGGGDNQVTGGNGDDRLYGGFGD
CHHHCCCEEEECCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCEEECCCCC
DILKGDRGADTYRLSRGNDVIIAFSLAENDRISVADGVDLSFKQVGDDLLITADGIHTTL
HHHCCCCCCCEEEEECCCEEEEEEEECCCCEEEEECCCCEEHHHCCCEEEEEECCCHHHH
KDVDKGEFLAADVIDFI
HHCCCCCEEEHHHHHCC
>Mature Secondary Structure
MLVDGNYYKKGGSTEIELGGTAGGWWKFAEFDRIEITGDLELAGDLRVLAINYFQLSAGD
CEECCCEECCCCCEEEEECCCCCCCEEECCCCEEEEEECEEECCCEEEEEEEEEEECCCC
SFVITRVDGDLDGQYDGLNEGDSVGSFESDNSGILELFITYKGGDGNDIELYTESVSGVL
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCC
PESLREPRIIGSAADDSLTGTSADEVIFGGSGDDVLLGGGGDNQVTGGNGDDRLYGGFGD
CHHHCCCEEEECCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCEEECCCCC
DILKGDRGADTYRLSRGNDVIIAFSLAENDRISVADGVDLSFKQVGDDLLITADGIHTTL
HHHCCCCCCCEEEEECCCEEEEEEEECCCCEEEEECCCCEEHHHCCCEEEEEECCCHHHH
KDVDKGEFLAADVIDFI
HHCCCCCEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA