Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33864149

Identifier: 33864149

GI number: 33864149

Start: 1987842

End: 1988507

Strand: Direct

Name: 33864149

Synonym: PMT1883

Alternate gene names: NA

Gene position: 1987842-1988507 (Clockwise)

Preceding gene: 33864144

Following gene: 33864150

Centisome position: 82.45

GC content: 57.21

Gene sequence:

>666_bases
ATGCAAAGTCATCCTGAACCAGCATTGAAGGGCTGCTTTCCCAACATGGCCCTCACTCCCTCCACGATGCTGCCTCTCGG
GACCCCCTTACCGGCGTTTGAATTGAAGGTGGTACCCGGCACCAATCTTGAGATCGATGGCGGGCTTGGCGCCCTGAACA
CAATCAAAACAAGCAACCTGCCAACCAAGCCCCTCCTGCTGATGACGCTCTGCGCCCACTGCCCTTTCGTGAAACACATT
GAAAAAGAACTGACCCATCTTGATCAGGACTACGGAGATTCCGTGCAGCTTCTGGCTATCGCCAGCAACAGTCTGATCAC
TCATCCCCAAGACGGTCCTGAGCAGCTCGCGGCTCAGGCAAAGCAACAAGGCTGGCGGTTCCCTTATCTACTGGATACTG
ACCAAAGCCTCGCCAAGGCCCTACAAGCCGCCTGCACCCCAGACTTCTTCCTATTTACCCCCTCTCCACAAGGACTGCAG
CGACTCTGCTACCGCGGCCAACTGGATAACAGCCGCCCTGGGAACGATGCACCTGTGACTGGATCGGACCTACGTGCTGC
CTTAGATGCCGTTTTGAACGGGCAGGATGTCTCTCCCCACCAGCAGGCCTCAATCGGCTGCAACATCAAGTGGCACCCAG
GACAAGAGCCCCCCTGGTTCGGCTGA

Upstream 100 bases:

>100_bases
TGGAAGACGACGTCATACAGCCGTTAAGCACTACGGCCAAAGCCACTAACAGGAAGGTCTTACCTTTTGCATTGACTTGC
TTCACGGCATTGATGCAGCC

Downstream 100 bases:

>100_bases
TCTGCCACTTCAAAAGCTGCTAAACCGTCTTCGGCTCGGCTTAAGGTGCTTCTCATGCAGGTGCCCCCTTTTAGCCTTAC
TCAACAGCTAGCCGAACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Redoxin Domain Protein; Thioredoxin Family Protein; Redoxin; Thiol-Disulfide Isomerase/Thioredoxin; Thioredoxin; Peroxiredoxin; Redoxin Superfamily; Thiol-Disulfide Isomerase Or Thioredoxin; Antioxidant AhpC/TSA Family; Alkyl Hydroperoxide Reductase; Thiol-Disulfide Isomerase; Thioredoxin Domain-Containing Protein; Anti-Oxidant AhpCTSA Family Protein; Thiol-Disulfide Isomerase Thioredoxin Family; Peroxiredoxin-Like Protein; Thiol-Disulfide Isomerase And Thioredoxin; AhpC/TSA Family Protein; Thiol-Disulfide Isomerase-Like Protein; Thiol-Disulfide Isomerase And Thioredoxins

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MQSHPEPALKGCFPNMALTPSTMLPLGTPLPAFELKVVPGTNLEIDGGLGALNTIKTSNLPTKPLLLMTLCAHCPFVKHI
EKELTHLDQDYGDSVQLLAIASNSLITHPQDGPEQLAAQAKQQGWRFPYLLDTDQSLAKALQAACTPDFFLFTPSPQGLQ
RLCYRGQLDNSRPGNDAPVTGSDLRAALDAVLNGQDVSPHQQASIGCNIKWHPGQEPPWFG

Sequences:

>Translated_221_residues
MQSHPEPALKGCFPNMALTPSTMLPLGTPLPAFELKVVPGTNLEIDGGLGALNTIKTSNLPTKPLLLMTLCAHCPFVKHI
EKELTHLDQDYGDSVQLLAIASNSLITHPQDGPEQLAAQAKQQGWRFPYLLDTDQSLAKALQAACTPDFFLFTPSPQGLQ
RLCYRGQLDNSRPGNDAPVTGSDLRAALDAVLNGQDVSPHQQASIGCNIKWHPGQEPPWFG
>Mature_221_residues
MQSHPEPALKGCFPNMALTPSTMLPLGTPLPAFELKVVPGTNLEIDGGLGALNTIKTSNLPTKPLLLMTLCAHCPFVKHI
EKELTHLDQDYGDSVQLLAIASNSLITHPQDGPEQLAAQAKQQGWRFPYLLDTDQSLAKALQAACTPDFFLFTPSPQGLQ
RLCYRGQLDNSRPGNDAPVTGSDLRAALDAVLNGQDVSPHQQASIGCNIKWHPGQEPPWFG

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23895; Mature: 23895

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSHPEPALKGCFPNMALTPSTMLPLGTPLPAFELKVVPGTNLEIDGGLGALNTIKTSNL
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHEECCCC
PTKPLLLMTLCAHCPFVKHIEKELTHLDQDYGDSVQLLAIASNSLITHPQDGPEQLAAQA
CCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECCCCCHHHHHHHH
KQQGWRFPYLLDTDQSLAKALQAACTPDFFLFTPSPQGLQRLCYRGQLDNSRPGNDAPVT
HHCCCCCCEEECCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCC
GSDLRAALDAVLNGQDVSPHQQASIGCNIKWHPGQEPPWFG
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MQSHPEPALKGCFPNMALTPSTMLPLGTPLPAFELKVVPGTNLEIDGGLGALNTIKTSNL
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHEECCCC
PTKPLLLMTLCAHCPFVKHIEKELTHLDQDYGDSVQLLAIASNSLITHPQDGPEQLAAQA
CCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECCCCCHHHHHHHH
KQQGWRFPYLLDTDQSLAKALQAACTPDFFLFTPSPQGLQRLCYRGQLDNSRPGNDAPVT
HHCCCCCCEEECCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCC
GSDLRAALDAVLNGQDVSPHQQASIGCNIKWHPGQEPPWFG
HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA