| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33864149
Identifier: 33864149
GI number: 33864149
Start: 1987842
End: 1988507
Strand: Direct
Name: 33864149
Synonym: PMT1883
Alternate gene names: NA
Gene position: 1987842-1988507 (Clockwise)
Preceding gene: 33864144
Following gene: 33864150
Centisome position: 82.45
GC content: 57.21
Gene sequence:
>666_bases ATGCAAAGTCATCCTGAACCAGCATTGAAGGGCTGCTTTCCCAACATGGCCCTCACTCCCTCCACGATGCTGCCTCTCGG GACCCCCTTACCGGCGTTTGAATTGAAGGTGGTACCCGGCACCAATCTTGAGATCGATGGCGGGCTTGGCGCCCTGAACA CAATCAAAACAAGCAACCTGCCAACCAAGCCCCTCCTGCTGATGACGCTCTGCGCCCACTGCCCTTTCGTGAAACACATT GAAAAAGAACTGACCCATCTTGATCAGGACTACGGAGATTCCGTGCAGCTTCTGGCTATCGCCAGCAACAGTCTGATCAC TCATCCCCAAGACGGTCCTGAGCAGCTCGCGGCTCAGGCAAAGCAACAAGGCTGGCGGTTCCCTTATCTACTGGATACTG ACCAAAGCCTCGCCAAGGCCCTACAAGCCGCCTGCACCCCAGACTTCTTCCTATTTACCCCCTCTCCACAAGGACTGCAG CGACTCTGCTACCGCGGCCAACTGGATAACAGCCGCCCTGGGAACGATGCACCTGTGACTGGATCGGACCTACGTGCTGC CTTAGATGCCGTTTTGAACGGGCAGGATGTCTCTCCCCACCAGCAGGCCTCAATCGGCTGCAACATCAAGTGGCACCCAG GACAAGAGCCCCCCTGGTTCGGCTGA
Upstream 100 bases:
>100_bases TGGAAGACGACGTCATACAGCCGTTAAGCACTACGGCCAAAGCCACTAACAGGAAGGTCTTACCTTTTGCATTGACTTGC TTCACGGCATTGATGCAGCC
Downstream 100 bases:
>100_bases TCTGCCACTTCAAAAGCTGCTAAACCGTCTTCGGCTCGGCTTAAGGTGCTTCTCATGCAGGTGCCCCCTTTTAGCCTTAC TCAACAGCTAGCCGAACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Redoxin Domain Protein; Thioredoxin Family Protein; Redoxin; Thiol-Disulfide Isomerase/Thioredoxin; Thioredoxin; Peroxiredoxin; Redoxin Superfamily; Thiol-Disulfide Isomerase Or Thioredoxin; Antioxidant AhpC/TSA Family; Alkyl Hydroperoxide Reductase; Thiol-Disulfide Isomerase; Thioredoxin Domain-Containing Protein; Anti-Oxidant AhpCTSA Family Protein; Thiol-Disulfide Isomerase Thioredoxin Family; Peroxiredoxin-Like Protein; Thiol-Disulfide Isomerase And Thioredoxin; AhpC/TSA Family Protein; Thiol-Disulfide Isomerase-Like Protein; Thiol-Disulfide Isomerase And Thioredoxins
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MQSHPEPALKGCFPNMALTPSTMLPLGTPLPAFELKVVPGTNLEIDGGLGALNTIKTSNLPTKPLLLMTLCAHCPFVKHI EKELTHLDQDYGDSVQLLAIASNSLITHPQDGPEQLAAQAKQQGWRFPYLLDTDQSLAKALQAACTPDFFLFTPSPQGLQ RLCYRGQLDNSRPGNDAPVTGSDLRAALDAVLNGQDVSPHQQASIGCNIKWHPGQEPPWFG
Sequences:
>Translated_221_residues MQSHPEPALKGCFPNMALTPSTMLPLGTPLPAFELKVVPGTNLEIDGGLGALNTIKTSNLPTKPLLLMTLCAHCPFVKHI EKELTHLDQDYGDSVQLLAIASNSLITHPQDGPEQLAAQAKQQGWRFPYLLDTDQSLAKALQAACTPDFFLFTPSPQGLQ RLCYRGQLDNSRPGNDAPVTGSDLRAALDAVLNGQDVSPHQQASIGCNIKWHPGQEPPWFG >Mature_221_residues MQSHPEPALKGCFPNMALTPSTMLPLGTPLPAFELKVVPGTNLEIDGGLGALNTIKTSNLPTKPLLLMTLCAHCPFVKHI EKELTHLDQDYGDSVQLLAIASNSLITHPQDGPEQLAAQAKQQGWRFPYLLDTDQSLAKALQAACTPDFFLFTPSPQGLQ RLCYRGQLDNSRPGNDAPVTGSDLRAALDAVLNGQDVSPHQQASIGCNIKWHPGQEPPWFG
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23895; Mature: 23895
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSHPEPALKGCFPNMALTPSTMLPLGTPLPAFELKVVPGTNLEIDGGLGALNTIKTSNL CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHEECCCC PTKPLLLMTLCAHCPFVKHIEKELTHLDQDYGDSVQLLAIASNSLITHPQDGPEQLAAQA CCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECCCCCHHHHHHHH KQQGWRFPYLLDTDQSLAKALQAACTPDFFLFTPSPQGLQRLCYRGQLDNSRPGNDAPVT HHCCCCCCEEECCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCC GSDLRAALDAVLNGQDVSPHQQASIGCNIKWHPGQEPPWFG HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MQSHPEPALKGCFPNMALTPSTMLPLGTPLPAFELKVVPGTNLEIDGGLGALNTIKTSNL CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHEECCCC PTKPLLLMTLCAHCPFVKHIEKELTHLDQDYGDSVQLLAIASNSLITHPQDGPEQLAAQA CCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECCCCCHHHHHHHH KQQGWRFPYLLDTDQSLAKALQAACTPDFFLFTPSPQGLQRLCYRGQLDNSRPGNDAPVT HHCCCCCCEEECCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCC GSDLRAALDAVLNGQDVSPHQQASIGCNIKWHPGQEPPWFG HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA