| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is cinA [C]
Identifier: 33864112
GI number: 33864112
Start: 1952777
End: 1954066
Strand: Reverse
Name: cinA [C]
Synonym: PMT1845
Alternate gene names: 33864112
Gene position: 1954066-1952777 (Counterclockwise)
Preceding gene: 33864113
Following gene: 33864111
Centisome position: 81.05
GC content: 56.28
Gene sequence:
>1290_bases GTGCCTATCGCGATGGTCATGGCTGAAGCTTCGGCTAGGCATGGTGTTGAGATCCTTTGCATTGGCACGGAGCTGTTGCT TGGCAACATCCTTAACAGCAATGCACGTTGGTTAGCTGAGGAGCTGGCTGCTCTGGGGCTCCCTCATTACCGCCAAACTG TTGTAGGAGACAACGTTGAACGTCTCAAAGAATCAGTTTTGGAGGCTGTTGATCGCAGTCGGATTCTGATCACCACTGGT GGCCTCGGACCAACGCCTGATGATCTGACTACTGAAACTTTGGCGGCTGCTTTTGATACGCCGCTTGAGGAACGTCCAGA ACTTTGGTTCGAGATTCAGGCCAAGCTCACTGCTGGCGGCAGCATTTCTGCAATCAGCAATCGCAAACAGGCGTTGTTCC CTCGTGGAGCTGAAATCCTTCCAAATCCTTCCGGTACTGCGCCGGGGATGATCTGGTGTCCTCGGCCGGGGTTCACTGTG CTCACCTTTCCGGGTGTGCCTTCTGAAATGAAGCAGATGTGGTCCCAGACAGCCGTGCCATGGCTGCGTCAGCACGGAGG ACTTGCTGACATCTTTGTGAGTCGGCTGTTGCGGTTTACAGGAATTGCTGAATCCACGCTTGCTGAAGAGGTGGCTGATT TGCTTGAGCAGGGCAATCCAACAGTGGCCCCGTATGCCGGCCTGGGAGAGGTGAAACTACGGATCACGGCCCGAGGGGCA ACGGTGGAGCAAGCCAGGCAGCTATTGGATCCAGTGGATGCAGCGCTCCGTCATCGCACCGGCTTGTTCTGTTACGGCTC GGATGATGAGAGTTTGGCATCGGTTGTGCTGGATTTGTTGCGTCAACGAGGTGAGACCGTTGTAGTGGCAGAGTCTTGTA CAGGTGGCGGCGTTGGTGCAGCTTTGGCTGCTGTTCCGAGAGCTTCTGAGGTTTTTCTTGGCGGGGTCATTGCTTACAGC AATGCCATTAAGCAAGCCCTATTGGGTATATCCACAGACCTTTTGCATCAGCACGGTGCAGTTTCGGATCCTGTGGTGCG GGCTATGGCTGAAGGGGCGCGTCAACGGCTGGGGGCAGATTGGTCCATTGCGGTGAGCGGTGTGGCAGGCCCTGGCGGTG GTACGCACGCCAAGCCTGTGGGGTTAGTGCATATCGCAGTAGCGGGACCGCATGGCTGTGATGCAAGCCCTGTGCAGTTC GGTGTTCGTCGTGGAAGGTTGGCAATTCAGGAGCTGAGTGTGGTTCGCAGTCTCGATCAGCTGCGCAGGCTCCTGCTGGA TGGGAGCTAA
Upstream 100 bases:
>100_bases GCCATTCTCGTGGCGACAGTCGTGATCAGCCGTCGTCAACGTAGTGCTGAAGGTGTTTTCGTAGACCCTTCTAGCCCCCT TGCAGCTCCTAGTGATCCAC
Downstream 100 bases:
>100_bases GGTTTTCGGCTACTGCCTCTGAACCTTGAGCTCCGGCACCCTCTACGACAAGGTGTGGGATCTCCATCGGGTGGCTGACC TGCCTGGTGGATCCACTCAG
Product: molybdenum cofactor biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MPIAMVMAEASARHGVEILCIGTELLLGNILNSNARWLAEELAALGLPHYRQTVVGDNVERLKESVLEAVDRSRILITTG GLGPTPDDLTTETLAAAFDTPLEERPELWFEIQAKLTAGGSISAISNRKQALFPRGAEILPNPSGTAPGMIWCPRPGFTV LTFPGVPSEMKQMWSQTAVPWLRQHGGLADIFVSRLLRFTGIAESTLAEEVADLLEQGNPTVAPYAGLGEVKLRITARGA TVEQARQLLDPVDAALRHRTGLFCYGSDDESLASVVLDLLRQRGETVVVAESCTGGGVGAALAAVPRASEVFLGGVIAYS NAIKQALLGISTDLLHQHGAVSDPVVRAMAEGARQRLGADWSIAVSGVAGPGGGTHAKPVGLVHIAVAGPHGCDASPVQF GVRRGRLAIQELSVVRSLDQLRRLLLDGS
Sequences:
>Translated_429_residues MPIAMVMAEASARHGVEILCIGTELLLGNILNSNARWLAEELAALGLPHYRQTVVGDNVERLKESVLEAVDRSRILITTG GLGPTPDDLTTETLAAAFDTPLEERPELWFEIQAKLTAGGSISAISNRKQALFPRGAEILPNPSGTAPGMIWCPRPGFTV LTFPGVPSEMKQMWSQTAVPWLRQHGGLADIFVSRLLRFTGIAESTLAEEVADLLEQGNPTVAPYAGLGEVKLRITARGA TVEQARQLLDPVDAALRHRTGLFCYGSDDESLASVVLDLLRQRGETVVVAESCTGGGVGAALAAVPRASEVFLGGVIAYS NAIKQALLGISTDLLHQHGAVSDPVVRAMAEGARQRLGADWSIAVSGVAGPGGGTHAKPVGLVHIAVAGPHGCDASPVQF GVRRGRLAIQELSVVRSLDQLRRLLLDGS >Mature_428_residues PIAMVMAEASARHGVEILCIGTELLLGNILNSNARWLAEELAALGLPHYRQTVVGDNVERLKESVLEAVDRSRILITTGG LGPTPDDLTTETLAAAFDTPLEERPELWFEIQAKLTAGGSISAISNRKQALFPRGAEILPNPSGTAPGMIWCPRPGFTVL TFPGVPSEMKQMWSQTAVPWLRQHGGLADIFVSRLLRFTGIAESTLAEEVADLLEQGNPTVAPYAGLGEVKLRITARGAT VEQARQLLDPVDAALRHRTGLFCYGSDDESLASVVLDLLRQRGETVVVAESCTGGGVGAALAAVPRASEVFLGGVIAYSN AIKQALLGISTDLLHQHGAVSDPVVRAMAEGARQRLGADWSIAVSGVAGPGGGTHAKPVGLVHIAVAGPHGCDASPVQFG VRRGRLAIQELSVVRSLDQLRRLLLDGS
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family
Homologues:
Organism=Escherichia coli, GI1788583, Length=411, Percent_Identity=29.683698296837, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1789052, Length=121, Percent_Identity=44.6280991735537, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1787818, Length=112, Percent_Identity=36.6071428571429, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CINAL_PROMM (Q7TUN0)
Other databases:
- EMBL: BX548175 - RefSeq: NP_895672.1 - ProteinModelPortal: Q7TUN0 - SMR: Q7TUN0 - STRING: Q7TUN0 - GeneID: 1728487 - GenomeReviews: BX548175_GR - KEGG: pmt:PMT1845 - NMPDR: fig|74547.1.peg.1839 - eggNOG: COG1058 - HOGENOM: HBG449871 - OMA: NPTVAPY - ProtClustDB: CLSK826228 - BioCyc: PMAR74547:PMT1845-MONOMER - HAMAP: MF_00226_B - InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 - Gene3D: G3DSA:3.40.980.10 - PIRSF: PIRSF006728 - SMART: SM00852 - TIGRFAMs: TIGR00199 - TIGRFAMs: TIGR00200
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth; SSF53218 MoCF_biosynth
EC number: NA
Molecular weight: Translated: 45303; Mature: 45171
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIAMVMAEASARHGVEILCIGTELLLGNILNSNARWLAEELAALGLPHYRQTVVGDNVE CCCEEEEEHHHCCCCCEEEEECHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCCHH RLKESVLEAVDRSRILITTGGLGPTPDDLTTETLAAAFDTPLEERPELWFEIQAKLTAGG HHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCC SISAISNRKQALFPRGAEILPNPSGTAPGMIWCPRPGFTVLTFPGVPSEMKQMWSQTAVP CCHHHCCCHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHCCH WLRQHGGLADIFVSRLLRFTGIAESTLAEEVADLLEQGNPTVAPYAGLGEVKLRITARGA HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCC TVEQARQLLDPVDAALRHRTGLFCYGSDDESLASVVLDLLRQRGETVVVAESCTGGGVGA CHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH ALAAVPRASEVFLGGVIAYSNAIKQALLGISTDLLHQHGAVSDPVVRAMAEGARQRLGAD HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCC WSIAVSGVAGPGGGTHAKPVGLVHIAVAGPHGCDASPVQFGVRRGRLAIQELSVVRSLDQ CEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LRRLLLDGS HHHHHCCCC >Mature Secondary Structure PIAMVMAEASARHGVEILCIGTELLLGNILNSNARWLAEELAALGLPHYRQTVVGDNVE CCEEEEEHHHCCCCCEEEEECHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCCHH RLKESVLEAVDRSRILITTGGLGPTPDDLTTETLAAAFDTPLEERPELWFEIQAKLTAGG HHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCC SISAISNRKQALFPRGAEILPNPSGTAPGMIWCPRPGFTVLTFPGVPSEMKQMWSQTAVP CCHHHCCCHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHCCH WLRQHGGLADIFVSRLLRFTGIAESTLAEEVADLLEQGNPTVAPYAGLGEVKLRITARGA HHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCC TVEQARQLLDPVDAALRHRTGLFCYGSDDESLASVVLDLLRQRGETVVVAESCTGGGVGA CHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH ALAAVPRASEVFLGGVIAYSNAIKQALLGISTDLLHQHGAVSDPVVRAMAEGARQRLGAD HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCC WSIAVSGVAGPGGGTHAKPVGLVHIAVAGPHGCDASPVQFGVRRGRLAIQELSVVRSLDQ CEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LRRLLLDGS HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917642