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The map label for this gene is psbN

Identifier: 33864105

GI number: 33864105

Start: 1943430

End: 1943576

Strand: Direct

Name: psbN

Synonym: PMT1838

Alternate gene names: 33864105

Gene position: 1943430-1943576 (Clockwise)

Preceding gene: 33864100

Following gene: 33864107

Centisome position: 80.61

GC content: 53.06

Gene sequence:

>147_bases
GTGATGGAAAACTCCTCCTCCGAGACCTACTCCCTGCTCATTGCCATGGTCACCATCACCTTCGGGCTGACCGGATACGG
GCTCTACACAGCTTTTGGTCCTCCCTCAAAAGAACTCGAAGACCCCTTTGAAGAACACGAAGACTGA

Upstream 100 bases:

>100_bases
GGGTGCTTTGAGCCATAACGGAGCTTCGGTCTCGGATGGTGATTAAGCATGCCTACTGTAATGGTCATAGTCCGCATACG
GACTAATCCTGTCGAGAGAT

Downstream 100 bases:

>100_bases
CGATCACATCAATCGACACGCTCAAGCAATAGTTCAGCCAACTCTCCAGGCTTCAGCTCTACCGCTTCGCCGAGACAGGA
CTCGTGAGCGCTACCAACCC

Product: photosystem II reaction center protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 48

Protein sequence:

>48_residues
MMENSSSETYSLLIAMVTITFGLTGYGLYTAFGPPSKELEDPFEEHED

Sequences:

>Translated_48_residues
MMENSSSETYSLLIAMVTITFGLTGYGLYTAFGPPSKELEDPFEEHED
>Mature_48_residues
MMENSSSETYSLLIAMVTITFGLTGYGLYTAFGPPSKELEDPFEEHED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbN family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBN_PROMM (Q7V4V1)

Other databases:

- EMBL:   BX548175
- RefSeq:   NP_895665.1
- STRING:   Q7V4V1
- GeneID:   1727915
- GenomeReviews:   BX548175_GR
- KEGG:   pmt:PMT1838
- NMPDR:   fig|74547.1.peg.1832
- eggNOG:   NOG09654
- HOGENOM:   HBG710424
- ProtClustDB:   PRK13183
- BioCyc:   PMAR74547:PMT1838-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_00293
- InterPro:   IPR003398
- ProDom:   PD005510

Pfam domain/function: PF02468 PsbN

EC number: NA

Molecular weight: Translated: 5350; Mature: 5350

Theoretical pI: Translated: 3.63; Mature: 3.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf32ba88)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMENSSSETYSLLIAMVTITFGLTGYGLYTAFGPPSKELEDPFEEHED
CCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHCCCH
>Mature Secondary Structure
MMENSSSETYSLLIAMVTITFGLTGYGLYTAFGPPSKELEDPFEEHED
CCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12917642