Click here to switch to the map view.

The map label for this gene is psbI [H]

Identifier: 33864107

GI number: 33864107

Start: 1946663

End: 1946782

Strand: Direct

Name: psbI [H]

Synonym: PMT1840

Alternate gene names: 33864107

Gene position: 1946663-1946782 (Clockwise)

Preceding gene: 33864105

Following gene: 33864108

Centisome position: 80.75

GC content: 52.5

Gene sequence:

>120_bases
ATGCTCGCCCTCAAGCTCTCCGTTTACTCGGTCGTCTTCTTCTTTATTGCGGTTTTCGTCTTCGGCTTCTTGGCCAGCGA
TCCTTCGAGGACACCAGCCCGTAAGGATCTCGAAGACTAA

Upstream 100 bases:

>100_bases
TCCACGCCAATCGTCGGGCTTGAAGCTGCTCCTCCATCCCTAAGTGCCCTCTATGCCCCATAAGATGTCATCGATGTACT
AGAAGCTGAACGGTCTCTCC

Downstream 100 bases:

>100_bases
AAGCCTTTGCAAGCGAAACTTCTCGGGTCACGCAACACACTGGACTGAGGCCTGCTCATATCTTCCATCAATTATGGGAA
GATCAGCTGACCCAGCTGAA

Product: photosystem II reaction center I protein I

Products: NA

Alternate protein names: PSII-I; PSII 4.4 kDa protein [H]

Number of amino acids: Translated: 39; Mature: 39

Protein sequence:

>39_residues
MLALKLSVYSVVFFFIAVFVFGFLASDPSRTPARKDLED

Sequences:

>Translated_39_residues
MLALKLSVYSVVFFFIAVFVFGFLASDPSRTPARKDLED
>Mature_39_residues
MLALKLSVYSVVFFFIAVFVFGFLASDPSRTPARKDLED

Specific function: This protein is a component of the reaction center of photosystem II [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbI family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003686 [H]

Pfam domain/function: PF02532 PsbI [H]

EC number: NA

Molecular weight: Translated: 4398; Mature: 4398

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALKLSVYSVVFFFIAVFVFGFLASDPSRTPARKDLED
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLALKLSVYSVVFFFIAVFVFGFLASDPSRTPARKDLED
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA