| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is tyrC [H]
Identifier: 33863991
GI number: 33863991
Start: 1826934
End: 1827878
Strand: Reverse
Name: tyrC [H]
Synonym: PMT1724
Alternate gene names: 33863991
Gene position: 1827878-1826934 (Counterclockwise)
Preceding gene: 33863994
Following gene: 33863989
Centisome position: 75.82
GC content: 55.87
Gene sequence:
>945_bases ATGGACTGCAGTGCGAGAACCGTAGGGATGGAGCAGAACAAAAACACATCACTTTGCGCTGGAGTCGTAGGGCTTGGGCT GATTGGTGGCTCCTTGGGATTGGATCTGCAGGCGCTTGGTTGGAAGGTCAATGGTCTGGTGCATCGTTCCACTACTGCTG ATAGGGCTCGCGCTAGGGGTTTGGCTCACTTGGTGAGTACCGATCCGGGCATTCTCGCGGATTGTGATTTGGTGATCCTG GCGCTGCCTTTGGCTCAGCTGCTCAATCCAGATCCGAATCTTCTAAAGGCTTTGCCTGCAGCTGCTGTGGTAACTGATGT GGGTTCAGTGAAGATGCCTGTTTTAGAGCTCTGGCGCGACCTACACCCCCGCTTTGTGGCTAGCCATCCCATGGCAGGCA CCGCTGAAGCAGGAGTGGACGCAGGGCTGCGGGGCTTATTTCAGCAACGTCCTTGGGTAGCGACACCTGACAATCAAACA GACCTTGAGGCGCTCGAGTTGGTGCGTCGATTTGCGGTGTCTTTGGGCAGTCAATGGTTTACGGCGGATGCAGCTAACCA TGATCAAGCGGTGGCGCTGATTTCCCACCTGCCTGTGCTGGTGAGTGCTGCGTTGCTACGAACAGTGGGTGAGGAGCGTG ATCCTGCTGTTCGCGAACTCGCCAGAGTGCTGTCTTCTAGTGGTTTTGCTGATACCACCAGGGTGGGTGGTGGCAATCCC CAGTTGGGGACATCTATGGCTGAGAGCAACACCGCAGCGATCTTGCGTGGTTTGGCTGCTTATCGCTGGAGCTTGGAGCA GCTTGAGGAGGCCGTTTTGAATGGGCACTGGTCGCAGTTAAAGGCTGAATTGGAACGTTCCCAGGCATTGCGACCCAGCT TTCTTGTTGCTGCTAACAACGACCTCAATTCGCCACCCGCAACTGATGACCTCGCTGAGCCATGA
Upstream 100 bases:
>100_bases GAGCAGGTGCTTGAGTTGCTGATGGCTGCGGGCTTCGAGCATTGCCAGAGCCTAGGAAGCTGTAAACCCGAGAAAGCTCC ATGTTGATTGGTCGATCAAC
Downstream 100 bases:
>100_bases GCTGGCGACAGGTCATGAGTGCCGAGATGCTCACCCCTGCAGTACCTTCACCAGGGTGAATTGAGTCGCCACAGAGCCAG AGCCCTCGCATGGGAGTGCG
Product: arogenate dehydrogenase
Products: NA
Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MDCSARTVGMEQNKNTSLCAGVVGLGLIGGSLGLDLQALGWKVNGLVHRSTTADRARARGLAHLVSTDPGILADCDLVIL ALPLAQLLNPDPNLLKALPAAAVVTDVGSVKMPVLELWRDLHPRFVASHPMAGTAEAGVDAGLRGLFQQRPWVATPDNQT DLEALELVRRFAVSLGSQWFTADAANHDQAVALISHLPVLVSAALLRTVGEERDPAVRELARVLSSSGFADTTRVGGGNP QLGTSMAESNTAAILRGLAAYRWSLEQLEEAVLNGHWSQLKAELERSQALRPSFLVAANNDLNSPPATDDLAEP
Sequences:
>Translated_314_residues MDCSARTVGMEQNKNTSLCAGVVGLGLIGGSLGLDLQALGWKVNGLVHRSTTADRARARGLAHLVSTDPGILADCDLVIL ALPLAQLLNPDPNLLKALPAAAVVTDVGSVKMPVLELWRDLHPRFVASHPMAGTAEAGVDAGLRGLFQQRPWVATPDNQT DLEALELVRRFAVSLGSQWFTADAANHDQAVALISHLPVLVSAALLRTVGEERDPAVRELARVLSSSGFADTTRVGGGNP QLGTSMAESNTAAILRGLAAYRWSLEQLEEAVLNGHWSQLKAELERSQALRPSFLVAANNDLNSPPATDDLAEP >Mature_314_residues MDCSARTVGMEQNKNTSLCAGVVGLGLIGGSLGLDLQALGWKVNGLVHRSTTADRARARGLAHLVSTDPGILADCDLVIL ALPLAQLLNPDPNLLKALPAAAVVTDVGSVKMPVLELWRDLHPRFVASHPMAGTAEAGVDAGLRGLFQQRPWVATPDNQT DLEALELVRRFAVSLGSQWFTADAANHDQAVALISHLPVLVSAALLRTVGEERDPAVRELARVLSSSGFADTTRVGGGNP QLGTSMAESNTAAILRGLAAYRWSLEQLEEAVLNGHWSQLKAELERSQALRPSFLVAANNDLNSPPATDDLAEP
Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.43; =1.3.1.12 [H]
Molecular weight: Translated: 33242; Mature: 33242
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCSARTVGMEQNKNTSLCAGVVGLGLIGGSLGLDLQALGWKVNGLVHRSTTADRARARG CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCEEECCEEECCCHHHHHHHHH LAHLVSTDPGILADCDLVILALPLAQLLNPDPNLLKALPAAAVVTDVGSVKMPVLELWRD HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LHPRFVASHPMAGTAEAGVDAGLRGLFQQRPWVATPDNQTDLEALELVRRFAVSLGSQWF HCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE TADAANHDQAVALISHLPVLVSAALLRTVGEERDPAVRELARVLSSSGFADTTRVGGGNP ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC QLGTSMAESNTAAILRGLAAYRWSLEQLEEAVLNGHWSQLKAELERSQALRPSFLVAANN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECC DLNSPPATDDLAEP CCCCCCCCCCCCCC >Mature Secondary Structure MDCSARTVGMEQNKNTSLCAGVVGLGLIGGSLGLDLQALGWKVNGLVHRSTTADRARARG CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCEEECCEEECCCHHHHHHHHH LAHLVSTDPGILADCDLVILALPLAQLLNPDPNLLKALPAAAVVTDVGSVKMPVLELWRD HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LHPRFVASHPMAGTAEAGVDAGLRGLFQQRPWVATPDNQTDLEALELVRRFAVSLGSQWF HCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE TADAANHDQAVALISHLPVLVSAALLRTVGEERDPAVRELARVLSSSGFADTTRVGGGNP ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC QLGTSMAESNTAAILRGLAAYRWSLEQLEEAVLNGHWSQLKAELERSQALRPSFLVAANN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECC DLNSPPATDDLAEP CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7916685 [H]