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The map label for this gene is recA [H]

Identifier: 33863994

GI number: 33863994

Start: 1829777

End: 1830916

Strand: Reverse

Name: recA [H]

Synonym: PMT1727

Alternate gene names: 33863994

Gene position: 1830916-1829777 (Counterclockwise)

Preceding gene: 33863995

Following gene: 33863991

Centisome position: 75.94

GC content: 54.82

Gene sequence:

>1140_bases
ATGTCAGTTGACGTGAAATCAGCCCAATCCTCTAAGTCTGATTCCCTCCAGGTTGAACCCCGTCCAGGTGAGCGGGACAA
AGCTCTCAATTTGGTGCTTGGTCAGATTGAACGCAATTTTGGCAAGGGTTCGATCATGCGCTTGGGGGATGCCTCTCGGA
TGCGGGTGGAGACCTTCCCTACAGGGGCGCTGACCCTTGATCTTGCCCTTGGCGGTGGGTACCCGAAAGGACGAGTCGTG
GAGGTGTACGGCCCGGAGAGTTCCGGTAAAACCACCCTTACCCTGCATGCCATCGCCGAGGTACAGCGTCGTGGTGGCGT
CGCAGCTTTTGTGGATGCCGAGCATGCGCTCGATCCGGTCTACGCAGCCTCTTTAGGAGTGGATATTGAGAACCTGCTGG
TCTCGCAGCCGGACACGGGGGAGATGGCTCTGGAGATAGTCGACCAGCTTGTGCGCTCTGCCGCCGTTGATATCGTTGTT
GTGGATTCCGTTGCTGCGCTCACTCCTCGGTCTGAGATCGAAGGTGAAATGGGCGATTTAGCTGTGGGTAGCCAGGCCCG
TCTGATGAGTCAGGCGATGCGCAAGATCACTGGCAACATCGGCAAATCTGGCTGCACGGTCATTTTTCTCAACCAGTTGC
GTCTCAAGATAGGCGTCACTTACGGCAACCCGGAGACGACGACTGGTGGCAATGCTCTCAAGTTTTACGCCTCCGTACGT
CTCGATATCCGTCGTATTCAAACGCTCAAACGCGGCACGGAGGAGTATGGAATTCGTGCCAAGGTGAAGGTGGCTAAAAA
TAAGGTAGCCCCTCCGTTTCGTATTGCTGAGTTCGATATTCTTTTTGGTCGTGGCATCAGTACCTTGGGTTGCTTGCTTG
ACCTAGCTGAAGAAACCGGTGTTGTTATCCGTAAGGGTGCCTGGTACAGCTATGAGGGCGACAATATCGGTCAGGGACGT
GACAACACGATTACTTGGCTTGAGCAGAATTCTGAAGCCCAGGAGCAGATTGAAGTTCTTGTGCGTCAGAAACTCACTGA
AGGGTCTGAGGTGACCGCTAATTCCATGCGTCCGTTGGCGGCTGCGGCGCGCACTGCGGCTAAAAAACCTGCCGTCAGCT
TGGCATCTGAAGCTGCTTAA

Upstream 100 bases:

>100_bases
GGACTCTTTGATCGGTGTCCGTCAGCTTTGCCGCAGTGTTTTTTGCTTCGCCTAGGTCAGCAGTCGACGGTACTCGTTTG
ATCCTTTATTTACCATTGCT

Downstream 100 bases:

>100_bases
GACTGGCTAAAAGAACGGAACGAGACAACCCAAGAGCTCTTTGAGGGTCTTGGGTTTGTTCCTGAAGAGAGAGATTTGGG
ATGATTGATGTTTTCTTTCC

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MSVDVKSAQSSKSDSLQVEPRPGERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETFPTGALTLDLALGGGYPKGRVV
EVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASLGVDIENLLVSQPDTGEMALEIVDQLVRSAAVDIVV
VDSVAALTPRSEIEGEMGDLAVGSQARLMSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVR
LDIRRIQTLKRGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVIRKGAWYSYEGDNIGQGR
DNTITWLEQNSEAQEQIEVLVRQKLTEGSEVTANSMRPLAAAARTAAKKPAVSLASEAA

Sequences:

>Translated_379_residues
MSVDVKSAQSSKSDSLQVEPRPGERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETFPTGALTLDLALGGGYPKGRVV
EVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASLGVDIENLLVSQPDTGEMALEIVDQLVRSAAVDIVV
VDSVAALTPRSEIEGEMGDLAVGSQARLMSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVR
LDIRRIQTLKRGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVIRKGAWYSYEGDNIGQGR
DNTITWLEQNSEAQEQIEVLVRQKLTEGSEVTANSMRPLAAAARTAAKKPAVSLASEAA
>Mature_378_residues
SVDVKSAQSSKSDSLQVEPRPGERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETFPTGALTLDLALGGGYPKGRVVE
VYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASLGVDIENLLVSQPDTGEMALEIVDQLVRSAAVDIVVV
DSVAALTPRSEIEGEMGDLAVGSQARLMSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRL
DIRRIQTLKRGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVIRKGAWYSYEGDNIGQGRD
NTITWLEQNSEAQEQIEVLVRQKLTEGSEVTANSMRPLAAAARTAAKKPAVSLASEAA

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=322, Percent_Identity=62.7329192546584, Blast_Score=415, Evalue=1e-117,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 40576; Mature: 40445

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDVKSAQSSKSDSLQVEPRPGERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETFP
CCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECC
TGALTLDLALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPV
CCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHCCEEEEEECHHHCCCH
YAASLGVDIENLLVSQPDTGEMALEIVDQLVRSAAVDIVVVDSVAALTPRSEIEGEMGDL
HHHHHCCCHHHHEECCCCCHHHHHHHHHHHHHHHHCCEEEECCHHHCCCHHHHCCCCCCE
AVGSQARLMSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVR
ECCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHH
LDIRRIQTLKRGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETG
HHHHHHHHHHCCHHHHCCEEEEEEECCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCC
VVIRKGAWYSYEGDNIGQGRDNTITWLEQNSEAQEQIEVLVRQKLTEGSEVTANSMRPLA
EEEECCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH
AAARTAAKKPAVSLASEAA
HHHHHHHCCCHHHHHCCCC
>Mature Secondary Structure 
SVDVKSAQSSKSDSLQVEPRPGERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETFP
CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECC
TGALTLDLALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPV
CCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHCCEEEEEECHHHCCCH
YAASLGVDIENLLVSQPDTGEMALEIVDQLVRSAAVDIVVVDSVAALTPRSEIEGEMGDL
HHHHHCCCHHHHEECCCCCHHHHHHHHHHHHHHHHCCEEEECCHHHCCCHHHHCCCCCCE
AVGSQARLMSQAMRKITGNIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVR
ECCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHH
LDIRRIQTLKRGTEEYGIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETG
HHHHHHHHHHCCHHHHCCEEEEEEECCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCC
VVIRKGAWYSYEGDNIGQGRDNTITWLEQNSEAQEQIEVLVRQKLTEGSEVTANSMRPLA
EEEECCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHH
AAARTAAKKPAVSLASEAA
HHHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA