| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863984
Identifier: 33863984
GI number: 33863984
Start: 1820116
End: 1820982
Strand: Reverse
Name: 33863984
Synonym: PMT1717
Alternate gene names: NA
Gene position: 1820982-1820116 (Counterclockwise)
Preceding gene: 33863986
Following gene: 33863973
Centisome position: 75.53
GC content: 56.52
Gene sequence:
>867_bases GTGGTTGCTGGGACGGCTGGTGCAGCGGTGTTTCGGCAGTTGGAACCTCTGCCGGAGCGGGAGTATGCCCAGTTGCAGAT GTTGCGCAAGCGTCTTGTCAGTTTTGGACGTGTTTGTGTGGCCTATTCCGGTGGAGTTGATAGTGCACTAGTGGCAGCGA TTGCGCGGGAACAACTTGGACCTCAAGCCTTTGCTGTGACAGGGGTTTCTCCTGCACTTGCCCCTGAGCTTCTCGATGAG GCCCGTCAGCAGGCTGCCTGGCTTGAGATTCGTCACCAGGAATGCATGACTCAGGAATTGGATGATCCGGCCTATAGCAG CAATCCCACAGACCGTTGTTTTGCTTGTAAGCGTGAGTTACATCGGCATCTGGGCTCGATTGCGCAATCAGCCGGTGGAG CTCAGGTGGTGGATGGCGTGAATCACGACGACTTGGGAGAGCATCGGCCTGGCATTGAGGCGGGCCGTCAGGCGGGTGTG CGTTCTCCGCTGGCTGAATTAGAGATCGGCAAGGCAGGTGTACGTCAGATGTCACGAGCTCTTGGATTCCCTTGGTGGGA TAAGCCTGCGCAGCCCTGCCTGGCATCACGTTTTCCCTATGGCAATAGCATCAACGCTCAACGATTGCGTCAGGTTGGTC TGGCTGAAGCCTGGTTAAGAACGCTTGGTTTTGCTGAGGTGCGAGTGCGCAGCCAGGGCTTGGCTGCACGCATTGAAGTT CCCGCTGATCGGATTGAGGATGTGCTGCTTGAGTTGGATCGTGAGCAGGTCGTCGCGCATTTCCTTGCGCTGGGTTTCAC CTCCATCAGCCTTGATCTGGAAGGTTTGGTCAGTGGCAAGCTCAATCGCACTGGCCAAGTGAATTGA
Upstream 100 bases:
>100_bases TGATGTTTGGCGATTTCTGGGTGTCTTGGATGCTGCCGTCTGCGAAGCCATTGACGGGTCCTCTACGGTTGGAGCTTAAC GAGATCGATGGGCTGAGAAG
Downstream 100 bases:
>100_bases AGGCTTGCAATGGCTTGCGGCTGTATCCCTTTCGCGACTCCTCTTGACTGAGTTGCTATCTGTGGATGATTGAACTTGCT GCTGTGGCTGATGTGCCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MVAGTAGAAVFRQLEPLPEREYAQLQMLRKRLVSFGRVCVAYSGGVDSALVAAIAREQLGPQAFAVTGVSPALAPELLDE ARQQAAWLEIRHQECMTQELDDPAYSSNPTDRCFACKRELHRHLGSIAQSAGGAQVVDGVNHDDLGEHRPGIEAGRQAGV RSPLAELEIGKAGVRQMSRALGFPWWDKPAQPCLASRFPYGNSINAQRLRQVGLAEAWLRTLGFAEVRVRSQGLAARIEV PADRIEDVLLELDREQVVAHFLALGFTSISLDLEGLVSGKLNRTGQVN
Sequences:
>Translated_288_residues MVAGTAGAAVFRQLEPLPEREYAQLQMLRKRLVSFGRVCVAYSGGVDSALVAAIAREQLGPQAFAVTGVSPALAPELLDE ARQQAAWLEIRHQECMTQELDDPAYSSNPTDRCFACKRELHRHLGSIAQSAGGAQVVDGVNHDDLGEHRPGIEAGRQAGV RSPLAELEIGKAGVRQMSRALGFPWWDKPAQPCLASRFPYGNSINAQRLRQVGLAEAWLRTLGFAEVRVRSQGLAARIEV PADRIEDVLLELDREQVVAHFLALGFTSISLDLEGLVSGKLNRTGQVN >Mature_288_residues MVAGTAGAAVFRQLEPLPEREYAQLQMLRKRLVSFGRVCVAYSGGVDSALVAAIAREQLGPQAFAVTGVSPALAPELLDE ARQQAAWLEIRHQECMTQELDDPAYSSNPTDRCFACKRELHRHLGSIAQSAGGAQVVDGVNHDDLGEHRPGIEAGRQAGV RSPLAELEIGKAGVRQMSRALGFPWWDKPAQPCLASRFPYGNSINAQRLRQVGLAEAWLRTLGFAEVRVRSQGLAARIEV PADRIEDVLLELDREQVVAHFLALGFTSISLDLEGLVSGKLNRTGQVN
Specific function: Unknown
COG id: COG1606
COG function: function code R; ATP-utilizing enzymes of the PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005232 - InterPro: IPR022310 - InterPro: IPR014729 [H]
Pfam domain/function: PF02540 NAD_synthase [H]
EC number: NA
Molecular weight: Translated: 31310; Mature: 31310
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAGTAGAAVFRQLEPLPEREYAQLQMLRKRLVSFGRVCVAYSGGVDSALVAAIAREQLG CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCC PQAFAVTGVSPALAPELLDEARQQAAWLEIRHQECMTQELDDPAYSSNPTDRCFACKREL CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH HRHLGSIAQSAGGAQVVDGVNHDDLGEHRPGIEAGRQAGVRSPLAELEIGKAGVRQMSRA HHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCHHHHHHHHHH LGFPWWDKPAQPCLASRFPYGNSINAQRLRQVGLAEAWLRTLGFAEVRVRSQGLAARIEV HCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEEC PADRIEDVLLELDREQVVAHFLALGFTSISLDLEGLVSGKLNRTGQVN CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEHHHHHHCCCCCCCCCC >Mature Secondary Structure MVAGTAGAAVFRQLEPLPEREYAQLQMLRKRLVSFGRVCVAYSGGVDSALVAAIAREQLG CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCC PQAFAVTGVSPALAPELLDEARQQAAWLEIRHQECMTQELDDPAYSSNPTDRCFACKREL CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH HRHLGSIAQSAGGAQVVDGVNHDDLGEHRPGIEAGRQAGVRSPLAELEIGKAGVRQMSRA HHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCHHHHHHHHHH LGFPWWDKPAQPCLASRFPYGNSINAQRLRQVGLAEAWLRTLGFAEVRVRSQGLAARIEV HCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEEC PADRIEDVLLELDREQVVAHFLALGFTSISLDLEGLVSGKLNRTGQVN CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]