| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863972
Identifier: 33863972
GI number: 33863972
Start: 1804355
End: 1805173
Strand: Direct
Name: 33863972
Synonym: PMT1705
Alternate gene names: NA
Gene position: 1804355-1805173 (Clockwise)
Preceding gene: 33863971
Following gene: 33863974
Centisome position: 74.84
GC content: 53.72
Gene sequence:
>819_bases TTGCTTTGCCCGGCCACTTCCGCAGAAGCACCATCTCCGCCACCTATTGAATCTCCTTCAAGAACAGCACCGTCTCAATC ACCGATTGCAGAACTAAACACCGGTCCCCGCACGCGCTTAAGGGGCAATTGGGTAGGTCGCCAACCTGTGTCTCCCTCTT TAAAGATTGTTGTCATGGCAGGACATGCAGACTCACAGGGGATGCATGGCTCAGGAACCCCAGGTGCTGCAGTTGATCAA AGGGGAGAAGCACCGATGGATCCCCGCATGCGGGATGAACTCTTTTGGAACCGGAAAGTACGCGATGCAGTCGTTGCCCT CAGTAAGCAAAAAGGGCTCAATATCATCGGCTACGACCCAGGAGCACTCTCAATTGCTAAAGCGAGCGATCCACGTACCA ACTGGTCAGTAGCCCGCCGCCTTTCCAAGCAAGGCGACTACATCCTAGAGATTCACTTCGATGCATACAGCCCGCATGGA TATGGATCTGGACTGATCCCAGCCCTCAATCGCAACCTCAACCGAGTGGATGAAAGTCTTGCTCAGAGCTTCGGTCGATT TCCCAGATTCTTTCGGGGAGGCCTTGGTGGACCAAGACGAGGGATCAGCATCCTTGAGATCGGAATGCTGGAAGGGAGTC TGGAGGCAAATCTCCGCAACCCCAAAACCAGAGAAGCAACCATTCAAGCCATCGCCCTAAAAGTCACCGATGCTTTGATG CTGGGAGTACGTGGGAAGACGTCTTCTAATCCACCGCCTGGTGTGGTCGACAACGCTCCTCCAACGTCGCATCCTCAAAC CAATTCTGAGGTCGAGTAA
Upstream 100 bases:
>100_bases TGGCTCTCTTCTATCCTCTCCAATCTGAGTGATTTCAAATCTCAGCGGGAAAGGCAGGAGCCTATTGGTTCTGAGCAAAG CTTTCAGCTTGGGGATCAGC
Downstream 100 bases:
>100_bases ACAAATCAGTGAGCAAAGCCTCCCTTGAATCAGCTGGTGCGACATATCCATACTCCCAACGAGCCAGTGGTGGCAAAGAC ATCAAGATCGACTCAGTTCG
Product: N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MLCPATSAEAPSPPPIESPSRTAPSQSPIAELNTGPRTRLRGNWVGRQPVSPSLKIVVMAGHADSQGMHGSGTPGAAVDQ RGEAPMDPRMRDELFWNRKVRDAVVALSKQKGLNIIGYDPGALSIAKASDPRTNWSVARRLSKQGDYILEIHFDAYSPHG YGSGLIPALNRNLNRVDESLAQSFGRFPRFFRGGLGGPRRGISILEIGMLEGSLEANLRNPKTREATIQAIALKVTDALM LGVRGKTSSNPPPGVVDNAPPTSHPQTNSEVE
Sequences:
>Translated_272_residues MLCPATSAEAPSPPPIESPSRTAPSQSPIAELNTGPRTRLRGNWVGRQPVSPSLKIVVMAGHADSQGMHGSGTPGAAVDQ RGEAPMDPRMRDELFWNRKVRDAVVALSKQKGLNIIGYDPGALSIAKASDPRTNWSVARRLSKQGDYILEIHFDAYSPHG YGSGLIPALNRNLNRVDESLAQSFGRFPRFFRGGLGGPRRGISILEIGMLEGSLEANLRNPKTREATIQAIALKVTDALM LGVRGKTSSNPPPGVVDNAPPTSHPQTNSEVE >Mature_272_residues MLCPATSAEAPSPPPIESPSRTAPSQSPIAELNTGPRTRLRGNWVGRQPVSPSLKIVVMAGHADSQGMHGSGTPGAAVDQ RGEAPMDPRMRDELFWNRKVRDAVVALSKQKGLNIIGYDPGALSIAKASDPRTNWSVARRLSKQGDYILEIHFDAYSPHG YGSGLIPALNRNLNRVDESLAQSFGRFPRFFRGGLGGPRRGISILEIGMLEGSLEANLRNPKTREATIQAIALKVTDALM LGVRGKTSSNPPPGVVDNAPPTSHPQTNSEVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29152; Mature: 29152
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCPATSAEAPSPPPIESPSRTAPSQSPIAELNTGPRTRLRGNWVGRQPVSPSLKIVVMA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEECCCCCCCCCCCCCEEEEEEE GHADSQGMHGSGTPGAAVDQRGEAPMDPRMRDELFWNRKVRDAVVALSKQKGLNIIGYDP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCEEEEECC GALSIAKASDPRTNWSVARRLSKQGDYILEIHFDAYSPHGYGSGLIPALNRNLNRVDESL CCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHH AQSFGRFPRFFRGGLGGPRRGISILEIGMLEGSLEANLRNPKTREATIQAIALKVTDALM HHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHH LGVRGKTSSNPPPGVVDNAPPTSHPQTNSEVE EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLCPATSAEAPSPPPIESPSRTAPSQSPIAELNTGPRTRLRGNWVGRQPVSPSLKIVVMA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEECCCCCCCCCCCCCEEEEEEE GHADSQGMHGSGTPGAAVDQRGEAPMDPRMRDELFWNRKVRDAVVALSKQKGLNIIGYDP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCEEEEECC GALSIAKASDPRTNWSVARRLSKQGDYILEIHFDAYSPHGYGSGLIPALNRNLNRVDESL CCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHH AQSFGRFPRFFRGGLGGPRRGISILEIGMLEGSLEANLRNPKTREATIQAIALKVTDALM HHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHHHHH LGVRGKTSSNPPPGVVDNAPPTSHPQTNSEVE EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA