| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is mrp [H]
Identifier: 33863974
GI number: 33863974
Start: 1806307
End: 1807383
Strand: Direct
Name: mrp [H]
Synonym: PMT1707
Alternate gene names: 33863974
Gene position: 1806307-1807383 (Clockwise)
Preceding gene: 33863972
Following gene: 33863975
Centisome position: 74.92
GC content: 57.01
Gene sequence:
>1077_bases ATGGCCACGGCCGAGCAGGCACACAATGCGCTTGATCAAGTCAAGGATTCAGGCAGCGGCCGCTCGGCTCTGGAAATGGG CTGGATTGACCAAGTCCGTGTCATTCCTCCTCGCGCCGTCATCCGCCTCACCTTGCCTGGATTTGCCCAAAGCCAAAGGG ATCGATTGGCACAAGAAGCTCGACAAGCCTTACTAGAGCTCAACGGCATCAGTGAGGTGCAGATTGAAATTGGGGAGACT GCCAGCCAGGGGCCTATAGGCCAGGCTGGCCATGGACAATCTGCCGAGCCCCAGGCCATCCAAGGGGTTCAGCAGATTGT CGCCGTAAGCAGTGGTAAAGGGGGTGTTGGCAAAAGCACCGTGGCCGTCAATCTGGCCTGCGCACTAGCCCAGGAGGGCC TAAGCGTGGGACTGCTCGATGCCGATATCTATGGACCAAATACTCCAACCATGCTTGGAGTCGCTGATCGCACGCCTGAG GTGAGCGGCAACGGTGCTGAGCAATGCATCATCCCGATCGAAAGTCATGGGATAGCCATGGTGTCGATGGGTCTGCTAAT CGAGGAGAACCAACCAGTGATCTGGCGCGGCCCGATGCTGAACGGGATTATCCGCCAATTCCTGTATCAGGCCTACTGGG GGGAGCGAGATGTTTTGGTGGTCGATCTACCTCCAGGCACTGGCGATGCACAGTTGTCACTAGCGCAGGCAGTTCCCATT GCGGGGGTGGTGATTGTCACCACCCCCCAGAAAGTTTCACTGCAGGATGCTCGCCGAGGACTGGCAATGTTCAAGCAAAT GGGCATCAACGTGCTCGGCGTGGTCGAAAACATGACCGCCTTCGTACCTCCCGATCAACCAGAGCGTCGTTACGCCCTAT TCGGCTCTGGAGGGGGAGAGCAGCTGGCGATGGAAAACAATGTCCCTCTGCTGGCACAAATCCCTATGGAAATGCCTGTG CAAGAGGGGGGTAATGAAGGTAGCCCCATCGTTCATAGCCGACCCGAATCAGTGAGTGCCAAAGCCTTCAAGCAATTAGC CAAACAAGTTCTGGATTGCGCCTCCAAGGCCAGCTGA
Upstream 100 bases:
>100_bases TTTGTGCCAAGACAGCTCTGTTTTTGTGTCTTTTCAGATATCGCCCTTGAGAACTGTCACGAGAGTCCACACATAGGATC CTCTCACCTGAAGGAAAGGC
Downstream 100 bases:
>100_bases CCATGCTTTCAAGCCAGAGGCGGCGACGCAATGGTGGCAAGTCCTTCCGTTCTAAGGGGCATCTACGTAGATGGTGGAAA GAACTGGATCTAGTGCTCTG
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MATAEQAHNALDQVKDSGSGRSALEMGWIDQVRVIPPRAVIRLTLPGFAQSQRDRLAQEARQALLELNGISEVQIEIGET ASQGPIGQAGHGQSAEPQAIQGVQQIVAVSSGKGGVGKSTVAVNLACALAQEGLSVGLLDADIYGPNTPTMLGVADRTPE VSGNGAEQCIIPIESHGIAMVSMGLLIEENQPVIWRGPMLNGIIRQFLYQAYWGERDVLVVDLPPGTGDAQLSLAQAVPI AGVVIVTTPQKVSLQDARRGLAMFKQMGINVLGVVENMTAFVPPDQPERRYALFGSGGGEQLAMENNVPLLAQIPMEMPV QEGGNEGSPIVHSRPESVSAKAFKQLAKQVLDCASKAS
Sequences:
>Translated_358_residues MATAEQAHNALDQVKDSGSGRSALEMGWIDQVRVIPPRAVIRLTLPGFAQSQRDRLAQEARQALLELNGISEVQIEIGET ASQGPIGQAGHGQSAEPQAIQGVQQIVAVSSGKGGVGKSTVAVNLACALAQEGLSVGLLDADIYGPNTPTMLGVADRTPE VSGNGAEQCIIPIESHGIAMVSMGLLIEENQPVIWRGPMLNGIIRQFLYQAYWGERDVLVVDLPPGTGDAQLSLAQAVPI AGVVIVTTPQKVSLQDARRGLAMFKQMGINVLGVVENMTAFVPPDQPERRYALFGSGGGEQLAMENNVPLLAQIPMEMPV QEGGNEGSPIVHSRPESVSAKAFKQLAKQVLDCASKAS >Mature_357_residues ATAEQAHNALDQVKDSGSGRSALEMGWIDQVRVIPPRAVIRLTLPGFAQSQRDRLAQEARQALLELNGISEVQIEIGETA SQGPIGQAGHGQSAEPQAIQGVQQIVAVSSGKGGVGKSTVAVNLACALAQEGLSVGLLDADIYGPNTPTMLGVADRTPEV SGNGAEQCIIPIESHGIAMVSMGLLIEENQPVIWRGPMLNGIIRQFLYQAYWGERDVLVVDLPPGTGDAQLSLAQAVPIA GVVIVTTPQKVSLQDARRGLAMFKQMGINVLGVVENMTAFVPPDQPERRYALFGSGGGEQLAMENNVPLLAQIPMEMPVQ EGGNEGSPIVHSRPESVSAKAFKQLAKQVLDCASKAS
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=256, Percent_Identity=46.09375, Blast_Score=221, Evalue=7e-58, Organism=Homo sapiens, GI6912540, Length=264, Percent_Identity=40.1515151515151, Blast_Score=191, Evalue=7e-49, Organism=Homo sapiens, GI118572611, Length=260, Percent_Identity=35.7692307692308, Blast_Score=168, Evalue=6e-42, Organism=Escherichia coli, GI87082045, Length=310, Percent_Identity=41.6129032258065, Blast_Score=236, Evalue=2e-63, Organism=Caenorhabditis elegans, GI25143050, Length=279, Percent_Identity=39.426523297491, Blast_Score=179, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6322188, Length=224, Percent_Identity=36.1607142857143, Blast_Score=161, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6321347, Length=259, Percent_Identity=35.9073359073359, Blast_Score=160, Evalue=2e-40, Organism=Drosophila melanogaster, GI221511043, Length=255, Percent_Identity=39.6078431372549, Blast_Score=187, Evalue=8e-48, Organism=Drosophila melanogaster, GI24667611, Length=258, Percent_Identity=37.984496124031, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI19921440, Length=265, Percent_Identity=32.4528301886792, Blast_Score=129, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 37733; Mature: 37601
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAEQAHNALDQVKDSGSGRSALEMGWIDQVRVIPPRAVIRLTLPGFAQSQRDRLAQEA CCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHH RQALLELNGISEVQIEIGETASQGPIGQAGHGQSAEPQAIQGVQQIVAVSSGKGGVGKST HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCH VAVNLACALAQEGLSVGLLDADIYGPNTPTMLGVADRTPEVSGNGAEQCIIPIESHGIAM HEEHHHHHHHHCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEE VSMGLLIEENQPVIWRGPMLNGIIRQFLYQAYWGERDVLVVDLPPGTGDAQLSLAQAVPI EEEEEEEECCCCEEEECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEHHHHCCC AGVVIVTTPQKVSLQDARRGLAMFKQMGINVLGVVENMTAFVPPDQPERRYALFGSGGGE CCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEHHCCEEECCCCCCCCEEEEEECCCCC QLAMENNVPLLAQIPMEMPVQEGGNEGSPIVHSRPESVSAKAFKQLAKQVLDCASKAS EEEECCCCCEEEECCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATAEQAHNALDQVKDSGSGRSALEMGWIDQVRVIPPRAVIRLTLPGFAQSQRDRLAQEA CCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEECCCCEEEEEECCCCCHHHHHHHHHHH RQALLELNGISEVQIEIGETASQGPIGQAGHGQSAEPQAIQGVQQIVAVSSGKGGVGKST HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCH VAVNLACALAQEGLSVGLLDADIYGPNTPTMLGVADRTPEVSGNGAEQCIIPIESHGIAM HEEHHHHHHHHCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCEEE VSMGLLIEENQPVIWRGPMLNGIIRQFLYQAYWGERDVLVVDLPPGTGDAQLSLAQAVPI EEEEEEEECCCCEEEECHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEHHHHCCC AGVVIVTTPQKVSLQDARRGLAMFKQMGINVLGVVENMTAFVPPDQPERRYALFGSGGGE CCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEHHCCEEECCCCCCCCEEEEEECCCCC QLAMENNVPLLAQIPMEMPVQEGGNEGSPIVHSRPESVSAKAFKQLAKQVLDCASKAS EEEECCCCCEEEECCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]