| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is panC
Identifier: 33863956
GI number: 33863956
Start: 1791542
End: 1793059
Strand: Reverse
Name: panC
Synonym: PMT1689
Alternate gene names: 33863956
Gene position: 1793059-1791542 (Counterclockwise)
Preceding gene: 33863957
Following gene: 33863950
Centisome position: 74.37
GC content: 54.48
Gene sequence:
>1518_bases TTGCATCAATGGCGTAAGCATCAGCAGTCTTCGGTTCATTTCGTACCCACCATGGGCGCTTTGCACCGCGGTCATGGCCA GCTGATCAAGTCAGTTCATGGATTTGGCAGGCTTCAACCAGCCGCTGTGTTGGTGAGTGTTTTCGTGAATCCTTTGCAGT TTGGCCCTGCCGAGGATTTCGATAGTTATCCTCGTGATCTTGAGGCCGATTGTGAGTTGGCATCAAGATCAGGTGCTTCT GCACTCTGGGCTCCTTCAGTTGATCAGGTTTTTCCTGGGGGGGCTTCTTCCCACTTCAGGATTCAGGTTCCTTCTCATCT TCAGGCACATTTGTGTGGGGCGAGTAGGCCTGGTCACTTTGATGGTGTGGTCACGGTGGTGGCTCGCCTTTTGGCTCTAG TTCGGCCAGAGGTGCTTGTGCTTGGTGAAAAGGATTGGCAGCAATTGGTGATCCTGCGCCATTTGGTTGCCCAGTTGGGT TTGCCGGTGCGGGTGCATGGGATAGCCACTGTGCGCGATGACGATGGCTTGGCTTGTAGTTCCCGTAATCGTTACCTCAT GACTCAACAGCGCCAGCAGGCGTTGGCCTTGCCTCAGCTACTTGCTCGAGCTGCTCGGGAGTCTCAGGATGGACGAGCAG TTGATCTTGCAGGGCTCCGGTGCGCATGGGAGCAACTTGGCTTGGAGGTTGAGTATGTAGAAAAGGTAGATGCCTTTAAC CTGCAGCCTTTGCATGCTGGCCGCAAGCTTTGCCTTCTGGCGGCGGCTGTGCGTTGCGGGGAGACTCGTCTCATCGATCA CACTTTTCTGATGTCTCGTCAGCCAATTGTTGCTATAGATGGGCCTGCCGGTGCTGGTAAAAGCACCGTGACAAGAGCCT TTGCTGAACGGCTTGGCCTGCTCTACCTCGATACGGGGGCCATGTATCGGGCGGTCACTTGGTTGACTCAACAACATGAT GTTGATCCGCACGACCCTGTAGCAGTCAAAACCATCCTTGAGAATCTTGAGCTTGAGCTTGAGCCATCTCAATCAGGAGC ACAGACGGTTCGGATCAATGGTCATGACGTAACAGAGGCGATCAGATCGCCGGAAGTGACGTCCTCGGTTTCAGTGGTTG CTGCTCACGGCTGTGTTCGTAAGGCTTTGACGGCTCAGCAACAGAGGATGGGTGTACGAGGCGGTTTGGTTGCTGAAGGA CGGGATATTGGTACGGCCGTTTTCCCAGATGCAGAGTTGAAGGTGTTCCTCACCGCCAGCCCGGCTGAACGTGCCAGGCG TCGTGCTCTGGACCTGGACAATCGTGGTTTCCCGGTTCCTGATCTGGCTGAGTTGGAAACACAAATCGAGGAACGTGATC GAATGGATAGCACCCGCGAAGTTGCTCCTTTACGCCAAGCTGAAGATGCCACTGAGTTGATCAGTGACGGCATGACGATT GAGGAGGTGATTGAGACTTTGATCGATCTGTTTCGAGTGCAGGTTCCCGAGGAGGTTTGGCCTACAGCTGGGCGCTGA
Upstream 100 bases:
>100_bases ATGGTGCTGCCCATGAGCTTGGTTTGATATCGAGTGGTATTGCCCAAGTGCGTCTTGAGGTGCTGCGCTGAGTTTTTCTG TTCTCAGTTCAACGGCTGAG
Downstream 100 bases:
>100_bases GTTCAATGAGCAGGCCTTCACAGGCGTCTTCAAGCAGATCGAGTACTTTCTCGAAGCCTGCATCTCCTCCGTAATAAGGG TCTGGCACCTCTTCAAGTGA
Product: bifunctional pantoate ligase/cytidylate kinase
Products: NA
Alternate protein names: Pantoate--beta-alanine ligase; Pantoate-activating enzyme; Pantothenate synthetase; Cytidylate kinase; CK; Cytidine monophosphate kinase; CMP kinase
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MHQWRKHQQSSVHFVPTMGALHRGHGQLIKSVHGFGRLQPAAVLVSVFVNPLQFGPAEDFDSYPRDLEADCELASRSGAS ALWAPSVDQVFPGGASSHFRIQVPSHLQAHLCGASRPGHFDGVVTVVARLLALVRPEVLVLGEKDWQQLVILRHLVAQLG LPVRVHGIATVRDDDGLACSSRNRYLMTQQRQQALALPQLLARAARESQDGRAVDLAGLRCAWEQLGLEVEYVEKVDAFN LQPLHAGRKLCLLAAAVRCGETRLIDHTFLMSRQPIVAIDGPAGAGKSTVTRAFAERLGLLYLDTGAMYRAVTWLTQQHD VDPHDPVAVKTILENLELELEPSQSGAQTVRINGHDVTEAIRSPEVTSSVSVVAAHGCVRKALTAQQQRMGVRGGLVAEG RDIGTAVFPDAELKVFLTASPAERARRRALDLDNRGFPVPDLAELETQIEERDRMDSTREVAPLRQAEDATELISDGMTI EEVIETLIDLFRVQVPEEVWPTAGR
Sequences:
>Translated_505_residues MHQWRKHQQSSVHFVPTMGALHRGHGQLIKSVHGFGRLQPAAVLVSVFVNPLQFGPAEDFDSYPRDLEADCELASRSGAS ALWAPSVDQVFPGGASSHFRIQVPSHLQAHLCGASRPGHFDGVVTVVARLLALVRPEVLVLGEKDWQQLVILRHLVAQLG LPVRVHGIATVRDDDGLACSSRNRYLMTQQRQQALALPQLLARAARESQDGRAVDLAGLRCAWEQLGLEVEYVEKVDAFN LQPLHAGRKLCLLAAAVRCGETRLIDHTFLMSRQPIVAIDGPAGAGKSTVTRAFAERLGLLYLDTGAMYRAVTWLTQQHD VDPHDPVAVKTILENLELELEPSQSGAQTVRINGHDVTEAIRSPEVTSSVSVVAAHGCVRKALTAQQQRMGVRGGLVAEG RDIGTAVFPDAELKVFLTASPAERARRRALDLDNRGFPVPDLAELETQIEERDRMDSTREVAPLRQAEDATELISDGMTI EEVIETLIDLFRVQVPEEVWPTAGR >Mature_505_residues MHQWRKHQQSSVHFVPTMGALHRGHGQLIKSVHGFGRLQPAAVLVSVFVNPLQFGPAEDFDSYPRDLEADCELASRSGAS ALWAPSVDQVFPGGASSHFRIQVPSHLQAHLCGASRPGHFDGVVTVVARLLALVRPEVLVLGEKDWQQLVILRHLVAQLG LPVRVHGIATVRDDDGLACSSRNRYLMTQQRQQALALPQLLARAARESQDGRAVDLAGLRCAWEQLGLEVEYVEKVDAFN LQPLHAGRKLCLLAAAVRCGETRLIDHTFLMSRQPIVAIDGPAGAGKSTVTRAFAERLGLLYLDTGAMYRAVTWLTQQHD VDPHDPVAVKTILENLELELEPSQSGAQTVRINGHDVTEAIRSPEVTSSVSVVAAHGCVRKALTAQQQRMGVRGGLVAEG RDIGTAVFPDAELKVFLTASPAERARRRALDLDNRGFPVPDLAELETQIEERDRMDSTREVAPLRQAEDATELISDGMTI EEVIETLIDLFRVQVPEEVWPTAGR
Specific function: Pantothenate biosynthesis; last step. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylate kinase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1786325, Length=264, Percent_Identity=37.8787878787879, Blast_Score=182, Evalue=3e-47, Organism=Escherichia coli, GI1787139, Length=218, Percent_Identity=43.1192660550459, Blast_Score=152, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6322046, Length=221, Percent_Identity=35.2941176470588, Blast_Score=133, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PANCY_PROMM (Q7V583)
Other databases:
- EMBL: BX548175 - RefSeq: NP_895516.1 - ProteinModelPortal: Q7V583 - STRING: Q7V583 - GeneID: 1728207 - GenomeReviews: BX548175_GR - KEGG: pmt:PMT1689 - NMPDR: fig|74547.1.peg.1683 - eggNOG: COG0414 - HOGENOM: HBG428839 - OMA: LGEKDWQ - ProtClustDB: PRK13477 - BioCyc: PMAR74547:PMT1689-MONOMER - GO: GO:0005737 - HAMAP: MF_01349 - InterPro: IPR003136 - InterPro: IPR011994 - InterPro: IPR003721 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR21299:SF1 - TIGRFAMs: TIGR00017 - TIGRFAMs: TIGR00018
Pfam domain/function: PF02224 Cytidylate_kin; PF02569 Pantoate_ligase
EC number: =6.3.2.1; =2.7.4.14
Molecular weight: Translated: 55364; Mature: 55364
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQWRKHQQSSVHFVPTMGALHRGHGQLIKSVHGFGRLQPAAVLVSVFVNPLQFGPAEDF CCCHHHHCCCCEEEEECHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCH DSYPRDLEADCELASRSGASALWAPSVDQVFPGGASSHFRIQVPSHLQAHLCGASRPGHF HCCCCCCCCHHHHHHCCCCCEECCCCHHHHCCCCCCCEEEEECCCHHHHHHCCCCCCCCC DGVVTVVARLLALVRPEVLVLGEKDWQQLVILRHLVAQLGLPVRVHGIATVRDDDGLACS HHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEC SRNRYLMTQQRQQALALPQLLARAARESQDGRAVDLAGLRCAWEQLGLEVEYVEKVDAFN CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCEEEHHHHCCCCC LQPLHAGRKLCLLAAAVRCGETRLIDHTFLMSRQPIVAIDGPAGAGKSTVTRAFAERLGL CCHHHHCHHHHHHHHHHHCCCCEEEHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCE LYLDTGAMYRAVTWLTQQHDVDPHDPVAVKTILENLELELEPSQSGAQTVRINGHDVTEA EEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCCCCCCEEEECCCHHHHH IRSPEVTSSVSVVAAHGCVRKALTAQQQRMGVRGGLVAEGRDIGTAVFPDAELKVFLTAS HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEECCCCCEEEEEECC PAERARRRALDLDNRGFPVPDLAELETQIEERDRMDSTREVAPLRQAEDATELISDGMTI HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCH EEVIETLIDLFRVQVPEEVWPTAGR HHHHHHHHHHHHHCCCHHHCCCCCC >Mature Secondary Structure MHQWRKHQQSSVHFVPTMGALHRGHGQLIKSVHGFGRLQPAAVLVSVFVNPLQFGPAEDF CCCHHHHCCCCEEEEECHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCH DSYPRDLEADCELASRSGASALWAPSVDQVFPGGASSHFRIQVPSHLQAHLCGASRPGHF HCCCCCCCCHHHHHHCCCCCEECCCCHHHHCCCCCCCEEEEECCCHHHHHHCCCCCCCCC DGVVTVVARLLALVRPEVLVLGEKDWQQLVILRHLVAQLGLPVRVHGIATVRDDDGLACS HHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEC SRNRYLMTQQRQQALALPQLLARAARESQDGRAVDLAGLRCAWEQLGLEVEYVEKVDAFN CCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCEEEHHHHCCCCC LQPLHAGRKLCLLAAAVRCGETRLIDHTFLMSRQPIVAIDGPAGAGKSTVTRAFAERLGL CCHHHHCHHHHHHHHHHHCCCCEEEHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCE LYLDTGAMYRAVTWLTQQHDVDPHDPVAVKTILENLELELEPSQSGAQTVRINGHDVTEA EEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCCCCCCCEEEECCCHHHHH IRSPEVTSSVSVVAAHGCVRKALTAQQQRMGVRGGLVAEGRDIGTAVFPDAELKVFLTAS HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEECCCCCEEEEEECC PAERARRRALDLDNRGFPVPDLAELETQIEERDRMDSTREVAPLRQAEDATELISDGMTI HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCH EEVIETLIDLFRVQVPEEVWPTAGR HHHHHHHHHHHHHCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917642