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The map label for this gene is cpeB [H]

Identifier: 33863950

GI number: 33863950

Start: 1787066

End: 1787611

Strand: Reverse

Name: cpeB [H]

Synonym: PMT1683

Alternate gene names: 33863950

Gene position: 1787611-1787066 (Counterclockwise)

Preceding gene: 33863956

Following gene: 33863949

Centisome position: 74.15

GC content: 52.93

Gene sequence:

>546_bases
ATGCTTGACGCATTCTCTCGCGCTGTAGTTGGTGCTGATGCCAAAGGGGCTTGCCTCGGCAGTGCCGATTTGGCTTCTCT
TCGTCAGCACGTTGCGGATGCCAACATTCGAATCGATGCAACCAATGCAATCGCGCAACACATTTCTTGTATTGCAGCGG
ATGCAGTGAGCGGCATGGTTTGCGAGAACACAGGCATGACTCAGCCTGGCGGTAACTGCTATCCCACTCGCCGCATGGCT
GCTTGCTTGCGCGATGGAGAGATCATCCTCCGCTATGTCAGTTACGCCCTCTTGGCAGGTGATGCATCTGTTCTGGATGA
TCGTTGCCTCAATGGTCTCAAAGAGACCTACGACGCTCTGGGGGTGCCTATTAAGAACGCAGTTCGTGCTGTTGAGATCA
TGAAGGCCGCTACTGTCGCTATCATTACGAATACAAATTCTGGTCCCTCTGCTTTCCAGGGCATCTCTGGTAAGGGTTCT
GACTGCCAGGGCATTGCTGCAGAAGCTGCTTCCTATTTTGATCGTGTGATCAGCTCCCTTAGCTGA

Upstream 100 bases:

>100_bases
TTAAGAGGTTTATCTGCAAGTGGTAATGTCCATCTAGCTTTTGGAGTCTTCCCTTAATGGTTCAGAAGCTCCCTAACCCC
CAGTCCTGTCCGGCTTGCCA

Downstream 100 bases:

>100_bases
ATCATTCGCAATCTTCTTCAAGTTAATTATCACACTTCCCTAAAAGGAATCACACGATGAAATCTGCTGTCACAACAGTG
ATCACTGCAGCAGATGCAGC

Product: phycobilisome protein (phycoerythrin beta-subunit)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MLDAFSRAVVGADAKGACLGSADLASLRQHVADANIRIDATNAIAQHISCIAADAVSGMVCENTGMTQPGGNCYPTRRMA
ACLRDGEIILRYVSYALLAGDASVLDDRCLNGLKETYDALGVPIKNAVRAVEIMKAATVAIITNTNSGPSAFQGISGKGS
DCQGIAAEAASYFDRVISSLS

Sequences:

>Translated_181_residues
MLDAFSRAVVGADAKGACLGSADLASLRQHVADANIRIDATNAIAQHISCIAADAVSGMVCENTGMTQPGGNCYPTRRMA
ACLRDGEIILRYVSYALLAGDASVLDDRCLNGLKETYDALGVPIKNAVRAVEIMKAATVAIITNTNSGPSAFQGISGKGS
DCQGIAAEAASYFDRVISSLS
>Mature_181_residues
MLDAFSRAVVGADAKGACLGSADLASLRQHVADANIRIDATNAIAQHISCIAADAVSGMVCENTGMTQPGGNCYPTRRMA
ACLRDGEIILRYVSYALLAGDASVLDDRCLNGLKETYDALGVPIKNAVRAVEIMKAATVAIITNTNSGPSAFQGISGKGS
DCQGIAAEAASYFDRVISSLS

Specific function: Green-light absorbing phycoerythrin of unknown function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phycobiliprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009050
- InterPro:   IPR012128 [H]

Pfam domain/function: PF00502 Phycobilisome [H]

EC number: NA

Molecular weight: Translated: 18690; Mature: 18690

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDAFSRAVVGADAKGACLGSADLASLRQHVADANIRIDATNAIAQHISCIAADAVSGMV
CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCEE
CENTGMTQPGGNCYPTRRMAACLRDGEIILRYVSYALLAGDASVLDDRCLNGLKETYDAL
ECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GVPIKNAVRAVEIMKAATVAIITNTNSGPSAFQGISGKGSDCQGIAAEAASYFDRVISSL
CCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHC
S
C
>Mature Secondary Structure
MLDAFSRAVVGADAKGACLGSADLASLRQHVADANIRIDATNAIAQHISCIAADAVSGMV
CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCEE
CENTGMTQPGGNCYPTRRMAACLRDGEIILRYVSYALLAGDASVLDDRCLNGLKETYDAL
ECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GVPIKNAVRAVEIMKAATVAIITNTNSGPSAFQGISGKGSDCQGIAAEAASYFDRVISSL
CCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917486 [H]