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The map label for this gene is cpeA [H]

Identifier: 33863949

GI number: 33863949

Start: 1786542

End: 1787009

Strand: Reverse

Name: cpeA [H]

Synonym: PMT1682

Alternate gene names: 33863949

Gene position: 1787009-1786542 (Counterclockwise)

Preceding gene: 33863950

Following gene: 33863948

Centisome position: 74.12

GC content: 48.08

Gene sequence:

>468_bases
ATGAAATCTGCTGTCACAACAGTGATCACTGCAGCAGATGCAGCAGGTCGTTTCCCTGATATCAGTGACCTTAAAGCTGT
CAAGGTATCCTTCGATCGTGCGGCTGCCCGCATGGAAGCTGCTGAGAAGCTTGCTTCTGGCATAGATAATGTGACTGCTG
ATGCACTTAAAGCTGTTTACAGCGATGGTAAGTATGACCTTGCAACTAGGGACAAGTGTGCAAGAGACATCAACCATTAC
TTGCGCCTGATTAACTATTGCTTGATAGCAGGTAGCACTGGCCCCCTTGATGAGTGGGGTATTGCCGGTGTTCGAGAAGT
TTTTCGCACACTCGGTATCCCTACTTCTGCCTACATCGAGGCCTTTAGCTACATCCGTGAGCGTGTATGTGTTCCTCGTG
ATATGGATCAGCAAGCTGCCAACGAGTTTAAGGACCTTCTTAACTACCTGATTAATGCTCTCTCCTGA

Upstream 100 bases:

>100_bases
AAGCTGCTTCCTATTTTGATCGTGTGATCAGCTCCCTTAGCTGAATCATTCGCAATCTTCTTCAAGTTAATTATCACACT
TCCCTAAAAGGAATCACACG

Downstream 100 bases:

>100_bases
ACCTCAATGCCTTTAGGCGGCTACCTCTGAAGGTCTGCGCAGCTTGTTTTTTAGCTTGGCTGGCCTTGTCTGTAATAGCA
TTGGGAATCTATTTGATTTA

Product: phycobilisome protein (phycoerythrin, alpha-subunit)

Products: NA

Alternate protein names: C-phycoerythrin class I alpha chain [H]

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKSAVTTVITAADAAGRFPDISDLKAVKVSFDRAAARMEAAEKLASGIDNVTADALKAVYSDGKYDLATRDKCARDINHY
LRLINYCLIAGSTGPLDEWGIAGVREVFRTLGIPTSAYIEAFSYIRERVCVPRDMDQQAANEFKDLLNYLINALS

Sequences:

>Translated_155_residues
MKSAVTTVITAADAAGRFPDISDLKAVKVSFDRAAARMEAAEKLASGIDNVTADALKAVYSDGKYDLATRDKCARDINHY
LRLINYCLIAGSTGPLDEWGIAGVREVFRTLGIPTSAYIEAFSYIRERVCVPRDMDQQAANEFKDLLNYLINALS
>Mature_155_residues
MKSAVTTVITAADAAGRFPDISDLKAVKVSFDRAAARMEAAEKLASGIDNVTADALKAVYSDGKYDLATRDKCARDINHY
LRLINYCLIAGSTGPLDEWGIAGVREVFRTLGIPTSAYIEAFSYIRERVCVPRDMDQQAANEFKDLLNYLINALS

Specific function: Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side. Note=Forms the periphery of the phycobilisome rod (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phycobiliprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009050
- InterPro:   IPR012128 [H]

Pfam domain/function: PF00502 Phycobilisome [H]

EC number: NA

Molecular weight: Translated: 16972; Mature: 16972

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAVTTVITAADAAGRFPDISDLKAVKVSFDRAAARMEAAEKLASGIDNVTADALKAVY
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDGKYDLATRDKCARDINHYLRLINYCLIAGSTGPLDEWGIAGVREVFRTLGIPTSAYIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
AFSYIRERVCVPRDMDQQAANEFKDLLNYLINALS
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSAVTTVITAADAAGRFPDISDLKAVKVSFDRAAARMEAAEKLASGIDNVTADALKAVY
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDGKYDLATRDKCARDINHYLRLINYCLIAGSTGPLDEWGIAGVREVFRTLGIPTSAYIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
AFSYIRERVCVPRDMDQQAANEFKDLLNYLINALS
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7512390 [H]