| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is cpeZ [H]
Identifier: 33863948
GI number: 33863948
Start: 1785737
End: 1786372
Strand: Reverse
Name: cpeZ [H]
Synonym: PMT1681
Alternate gene names: 33863948
Gene position: 1786372-1785737 (Counterclockwise)
Preceding gene: 33863949
Following gene: 33863946
Centisome position: 74.1
GC content: 45.44
Gene sequence:
>636_bases ATGAGCAAGGATGAAAACTGTAAGCCTGATCTTGAGGATTTATTTGATGACTTTGCTCATCCAAATCCACAAATCAAAGA AGAAGCTTATTTGAAAATGTCTCGCCACTGGCCTGAGGAGTCAATGCCTAGACTGCTGGCCAATCTGGATCAGACTGATA TTGAACTTAGAAGAGCATCTGTAAAAGCTCTTGGTGTATTTGGCGGACGCTCCTTGCTCCCTTTGGCGCAGATATTTCAT GCCAGTGAGAATAGAATAGTTCGCACAAGTTGTCTCAAGGCTTTTGTGCAAGTGGCAGCTAAGTTCCCTGGTGAAGCCTT CCCAAAAGAGGCCATGGAGGTTGTCGAATTGGCTCTACAGGATGATATCCCTGAGTTGATCCTTACAGTGGTTCCGCTTT TATCTCTTCTCGGCAAGCAGGGGCTTCCGCTTCTGCTACAGAGTTGCAAAAGTAAGAATATCTTGCTGGCTGCTATTGCA GTAACTGCTCTTGGGGAAGTTGATGATCCTGCAGTTGAAGCTTGCTTGAAAGAGCTTCAGGCGGACGATTTAATTGATGA TTTGTTGGGAGGGAGCGTGATTGATGCTCTCAATACATTTGAGCAACGTAATGCAGGCAAGCCCAGCACTCAATAA
Upstream 100 bases:
>100_bases CTGTAATAGCATTGGGAATCTATTTGATTTAAAGATCTCCACCAAGCTCTTCTGAATTACTCTTATCGCTAGTGACTTGA GATGTGCTAAGCCTGCATAC
Downstream 100 bases:
>100_bases TGACTAGCTTTCATCATTATGTTTCTTTAGATCTTCGTGCGAAAGCTGATCAATTGCGAGCTGCAAAACCTTATTGACGC TTTCATCTTGTTCTGCAGAC
Product: bilin biosynthesis protein cpeZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSKDENCKPDLEDLFDDFAHPNPQIKEEAYLKMSRHWPEESMPRLLANLDQTDIELRRASVKALGVFGGRSLLPLAQIFH ASENRIVRTSCLKAFVQVAAKFPGEAFPKEAMEVVELALQDDIPELILTVVPLLSLLGKQGLPLLLQSCKSKNILLAAIA VTALGEVDDPAVEACLKELQADDLIDDLLGGSVIDALNTFEQRNAGKPSTQ
Sequences:
>Translated_211_residues MSKDENCKPDLEDLFDDFAHPNPQIKEEAYLKMSRHWPEESMPRLLANLDQTDIELRRASVKALGVFGGRSLLPLAQIFH ASENRIVRTSCLKAFVQVAAKFPGEAFPKEAMEVVELALQDDIPELILTVVPLLSLLGKQGLPLLLQSCKSKNILLAAIA VTALGEVDDPAVEACLKELQADDLIDDLLGGSVIDALNTFEQRNAGKPSTQ >Mature_210_residues SKDENCKPDLEDLFDDFAHPNPQIKEEAYLKMSRHWPEESMPRLLANLDQTDIELRRASVKALGVFGGRSLLPLAQIFHA SENRIVRTSCLKAFVQVAAKFPGEAFPKEAMEVVELALQDDIPELILTVVPLLSLLGKQGLPLLLQSCKSKNILLAAIAV TALGEVDDPAVEACLKELQADDLIDDLLGGSVIDALNTFEQRNAGKPSTQ
Specific function: Involved in the biosynthesis of bilin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR000357 [H]
Pfam domain/function: PF02985 HEAT [H]
EC number: NA
Molecular weight: Translated: 23129; Mature: 22998
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDENCKPDLEDLFDDFAHPNPQIKEEAYLKMSRHWPEESMPRLLANLDQTDIELRRAS CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHH VKALGVFGGRSLLPLAQIFHASENRIVRTSCLKAFVQVAAKFPGEAFPKEAMEVVELALQ HHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH DDIPELILTVVPLLSLLGKQGLPLLLQSCKSKNILLAAIAVTALGEVDDPAVEACLKELQ CCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH ADDLIDDLLGGSVIDALNTFEQRNAGKPSTQ HHHHHHHHHCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SKDENCKPDLEDLFDDFAHPNPQIKEEAYLKMSRHWPEESMPRLLANLDQTDIELRRAS CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHH VKALGVFGGRSLLPLAQIFHASENRIVRTSCLKAFVQVAAKFPGEAFPKEAMEVVELALQ HHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH DDIPELILTVVPLLSLLGKQGLPLLLQSCKSKNILLAAIAVTALGEVDDPAVEACLKELQ CCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH ADDLIDDLLGGSVIDALNTFEQRNAGKPSTQ HHHHHHHHHCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8425055 [H]