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The map label for this gene is psbT

Identifier: 33863933

GI number: 33863933

Start: 1771377

End: 1771484

Strand: Direct

Name: psbT

Synonym: PMT1666

Alternate gene names: 33863933

Gene position: 1771377-1771484 (Clockwise)

Preceding gene: 33863932

Following gene: 33863934

Centisome position: 73.47

GC content: 49.07

Gene sequence:

>108_bases
ATGGATGCTTTTGCTTACACCCTCTTAATGACCCTGGTGGTTGCCACTCTGTTCTTCGCGGTTGCATTCCGTGATCCGCC
GAAAATCGGCAAAGACAGTGGCAAATAA

Upstream 100 bases:

>100_bases
CCAAAAGTTGGGCGACTCTTCTACTCGTCGCGTTCCAGGGCAAACTTAAGCCTTCCACAGGAACTACACCTTCAGCTGAT
CGACCTTACGGAGACTCTCA

Downstream 100 bases:

>100_bases
AACGCCAATCTCTTTAAAGCCCCGCTTCGGCGGGGCTTTTTTTTGTCTTTAAGCACTTCTTCCTCCAATCTCGTTGATCC
AAATAATCATGCAGTCTTAT

Product: photosystem II reaction centre T protein

Products: NA

Alternate protein names: PSII-T

Number of amino acids: Translated: 35; Mature: 35

Protein sequence:

>35_residues
MDAFAYTLLMTLVVATLFFAVAFRDPPKIGKDSGK

Sequences:

>Translated_35_residues
MDAFAYTLLMTLVVATLFFAVAFRDPPKIGKDSGK
>Mature_35_residues
MDAFAYTLLMTLVVATLFFAVAFRDPPKIGKDSGK

Specific function: Seems to play a role in the dimerization of PSII

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbT family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBT_PROM3 (A2CBT8)

Other databases:

- EMBL:   CP000554
- RefSeq:   YP_001018213.1
- STRING:   A2CBT8
- GeneID:   4778042
- GenomeReviews:   CP000554_GR
- KEGG:   pmf:P9303_22131
- HOGENOM:   HBG710454
- ProtClustDB:   CLSK647314
- GO:   GO:0015979
- HAMAP:   MF_00808
- InterPro:   IPR001743
- ProDom:   PD004453

Pfam domain/function: PF01405 PsbT

EC number: NA

Molecular weight: Translated: 3836; Mature: 3836

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe13c5a8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAFAYTLLMTLVVATLFFAVAFRDPPKIGKDSGK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
>Mature Secondary Structure
MDAFAYTLLMTLVVATLFFAVAFRDPPKIGKDSGK
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA