Click here to switch to the map view.

The map label for this gene is nrdR [H]

Identifier: 33863934

GI number: 33863934

Start: 1771697

End: 1772173

Strand: Direct

Name: nrdR [H]

Synonym: PMT1667

Alternate gene names: 33863934

Gene position: 1771697-1772173 (Clockwise)

Preceding gene: 33863933

Following gene: 33863935

Centisome position: 73.49

GC content: 48.85

Gene sequence:

>477_bases
ATGCAATGCCCCTCCTGCCAAAACACTGATAGTCGGGTACTTGAATCCCGCGCTGCTGATGCCGGGCGAAGTGTAAGAAG
GCGCCGTGAATGCTTACATTGCGACTTTCGCTTCACTACCTACGAACGCGTCGAAACTGTTCCAATCACAGTTTTGAAGC
GTAATGGCAATAGGGAGACTTTCAATCGCAGTAAAATCCTTAATGGCCTTACGCTTGCCTGTCAAAAAACCGGTCTCGAG
CAAGACAGACTTGAGTCAATGGTGAACGAGCTTGAACTGCAACTTCAGCAAAGAAGTGGGCGTGAAGTGAATAGTGCTGA
AATCGGCGAAATGGTTTTGGACCAACTATCGGAAATGAGCGAGGTCGCTTACGTACGCTTTGCGTCGGTATATCGTGATT
TCCGTGGAGTTAATGATTTCGTAGCAGCACTTGAAGGCATTCATGCCAACAAGGAACAGCTCGCAGCCGTTCGCTGA

Upstream 100 bases:

>100_bases
GATTTACAGCACTAAAGCCTGAGAATGCAGTTCAACAGGTCCTTCTCAAGGCTCGAATTACTGTCTAGACTTAGTTCTCT
AAGATTGGAGTCTTACGGGC

Downstream 100 bases:

>100_bases
GAATAAGAAGTCAATCTGTAGAGTGATCAATTAATTCCGAAAGGTCGGCGGGCCACTCGGATTTCCTTGCGCACTGCCAT
AGGGCAGACCGCCATCCAAC

Product: NrdR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MQCPSCQNTDSRVLESRAADAGRSVRRRRECLHCDFRFTTYERVETVPITVLKRNGNRETFNRSKILNGLTLACQKTGLE
QDRLESMVNELELQLQQRSGREVNSAEIGEMVLDQLSEMSEVAYVRFASVYRDFRGVNDFVAALEGIHANKEQLAAVR

Sequences:

>Translated_158_residues
MQCPSCQNTDSRVLESRAADAGRSVRRRRECLHCDFRFTTYERVETVPITVLKRNGNRETFNRSKILNGLTLACQKTGLE
QDRLESMVNELELQLQQRSGREVNSAEIGEMVLDQLSEMSEVAYVRFASVYRDFRGVNDFVAALEGIHANKEQLAAVR
>Mature_158_residues
MQCPSCQNTDSRVLESRAADAGRSVRRRRECLHCDFRFTTYERVETVPITVLKRNGNRETFNRSKILNGLTLACQKTGLE
QDRLESMVNELELQLQQRSGREVNSAEIGEMVLDQLSEMSEVAYVRFASVYRDFRGVNDFVAALEGIHANKEQLAAVR

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=148, Percent_Identity=43.9189189189189, Blast_Score=125, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 18046; Mature: 18046

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCPSCQNTDSRVLESRAADAGRSVRRRRECLHCDFRFTTYERVETVPITVLKRNGNRET
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCEEEEEEECCCCCH
FNRSKILNGLTLACQKTGLEQDRLESMVNELELQLQQRSGREVNSAEIGEMVLDQLSEMS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
EVAYVRFASVYRDFRGVNDFVAALEGIHANKEQLAAVR
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCCC
>Mature Secondary Structure
MQCPSCQNTDSRVLESRAADAGRSVRRRRECLHCDFRFTTYERVETVPITVLKRNGNRET
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCEEEEEEECCCCCH
FNRSKILNGLTLACQKTGLEQDRLESMVNELELQLQQRSGREVNSAEIGEMVLDQLSEMS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
EVAYVRFASVYRDFRGVNDFVAALEGIHANKEQLAAVR
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA