Click here to switch to the map view.

The map label for this gene is ywfO [H]

Identifier: 33863918

GI number: 33863918

Start: 1758493

End: 1759734

Strand: Direct

Name: ywfO [H]

Synonym: PMT1651

Alternate gene names: 33863918

Gene position: 1758493-1759734 (Clockwise)

Preceding gene: 33863917

Following gene: 33863919

Centisome position: 72.94

GC content: 57.73

Gene sequence:

>1242_bases
ATGAGTCTGCGCACATATCACGACCCTCTCCATCGCGGCATCACCCTCAATGCCAGCGATGCAGCAGAGGCCATGGTGAT
GCAGTTAATCGATGCGGCGCCATTCCAGCGGCTGCGCCGCATCCGTCAGCTTGGGCCAGCCTTCCTCACCTTTCATGGAG
CTGAGTCCAGTCGCTTCACCCATTCCCTTGGTGTGTTCCATCTCGCACGCCTTGCTCTGGAAAGGTTGCTGCAGTTCGAC
TCAGGCCTAGAGGAACATCGCGGGCTGCTCTATGGAGCTGCCCTACTGCATGACCTCGGCCATGCCCCCCTAAGCCATAC
CGGAGAGGAAATATTTGGTCTGGACCATGAGACCTGGTCGGCGCGTTTAGTCAGAGAACATCCCGCCGTGCGTGCGCCCC
TTGAGGCCTACGCCCCGGGCACTGCAGATGGAGTAGCCAATCTTCTTGAACGGGGCAGTTCACCCCACAGCGTGATCAAG
GCTCTGGTTAGTAGCCAACTGGACTGCGACCGACTCGACTATCTCTTGCGAGACAGCTACAGCACAGGAACCCATTACGG
CCAGCTCGACCTCGAGCGAATCCTCTCCGCCCTCACCCTGGCGCCTGATGGAGCCATGGCCATTCATCCAAAAGGCCTCA
TGGCAGTTGAGCACTACCTAGTCGTACGCAACCTGATGTACCGCAGTGTCTACAACCACCGTCTCAATGTTGTTTGCAAC
TGGCTGCTTGAGCAGGTGGTGAGCACCGCTCGCCAATTCGGAGCTGCTCATGTTTGGGCCGACAAGATCATGGCCACCTG
GCTCTGGAGCCTCAATCAACTCGACCTCGACACATTCCTGGCCAATGATGACCTGCGCACCGGCTATCACCTCCTCCGTT
GGCAAGACGAGGGACCTGCACCTCTAGCCGAACTCTGCAAACGCTTCCTCAATCGCCACCTCCTGAAAGCCCTTGCAGTA
CAACATCTAAGCCATAGCAACCAGCTAGAGGTCCTCACTCTGGCGCGGCAACTCGCTGAACGCCAAGGCTTCGATCCAGC
GCTCTGCTGTGGATTACGCCATCAGCAACAGCGCGGGTATCACCCCTACAAAGGTGGGCTACGTCTTTGGGATGGAAGGC
AATTGCGAGCTCTAGAGCAAGCCTCTCCTCTGGTCGCCAGCTTGATTACCCCAGCCGACTCTTCATGGTTGATTTATCCC
CGAGAGATTCATGGGGAGCTTCAAGCTGCGCTGGCAACCTAG

Upstream 100 bases:

>100_bases
TCGACCGCGATCAGGATGCCCAGTTACAAACCAAAGAAGATCTTCAGCTCGATAGTGCTGAAGATGTTGAATTCAAAACT
CAGCAGAATCGTGATGATCC

Downstream 100 bases:

>100_bases
ACGGACTGGCCTAGCGTCCTCATCTGAAAAGGGTCTTGGAGATCGAGGTGGGCGAGCCTGAGGCACAACGACTCAAACTC
CCCTGGTGCCGAGAAGCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MSLRTYHDPLHRGITLNASDAAEAMVMQLIDAAPFQRLRRIRQLGPAFLTFHGAESSRFTHSLGVFHLARLALERLLQFD
SGLEEHRGLLYGAALLHDLGHAPLSHTGEEIFGLDHETWSARLVREHPAVRAPLEAYAPGTADGVANLLERGSSPHSVIK
ALVSSQLDCDRLDYLLRDSYSTGTHYGQLDLERILSALTLAPDGAMAIHPKGLMAVEHYLVVRNLMYRSVYNHRLNVVCN
WLLEQVVSTARQFGAAHVWADKIMATWLWSLNQLDLDTFLANDDLRTGYHLLRWQDEGPAPLAELCKRFLNRHLLKALAV
QHLSHSNQLEVLTLARQLAERQGFDPALCCGLRHQQQRGYHPYKGGLRLWDGRQLRALEQASPLVASLITPADSSWLIYP
REIHGELQAALAT

Sequences:

>Translated_413_residues
MSLRTYHDPLHRGITLNASDAAEAMVMQLIDAAPFQRLRRIRQLGPAFLTFHGAESSRFTHSLGVFHLARLALERLLQFD
SGLEEHRGLLYGAALLHDLGHAPLSHTGEEIFGLDHETWSARLVREHPAVRAPLEAYAPGTADGVANLLERGSSPHSVIK
ALVSSQLDCDRLDYLLRDSYSTGTHYGQLDLERILSALTLAPDGAMAIHPKGLMAVEHYLVVRNLMYRSVYNHRLNVVCN
WLLEQVVSTARQFGAAHVWADKIMATWLWSLNQLDLDTFLANDDLRTGYHLLRWQDEGPAPLAELCKRFLNRHLLKALAV
QHLSHSNQLEVLTLARQLAERQGFDPALCCGLRHQQQRGYHPYKGGLRLWDGRQLRALEQASPLVASLITPADSSWLIYP
REIHGELQAALAT
>Mature_412_residues
SLRTYHDPLHRGITLNASDAAEAMVMQLIDAAPFQRLRRIRQLGPAFLTFHGAESSRFTHSLGVFHLARLALERLLQFDS
GLEEHRGLLYGAALLHDLGHAPLSHTGEEIFGLDHETWSARLVREHPAVRAPLEAYAPGTADGVANLLERGSSPHSVIKA
LVSSQLDCDRLDYLLRDSYSTGTHYGQLDLERILSALTLAPDGAMAIHPKGLMAVEHYLVVRNLMYRSVYNHRLNVVCNW
LLEQVVSTARQFGAAHVWADKIMATWLWSLNQLDLDTFLANDDLRTGYHLLRWQDEGPAPLAELCKRFLNRHLLKALAVQ
HLSHSNQLEVLTLARQLAERQGFDPALCCGLRHQQQRGYHPYKGGLRLWDGRQLRALEQASPLVASLITPADSSWLIYPR
EIHGELQAALAT

Specific function: Unknown

COG id: COG1078

COG function: function code R; HD superfamily phosphohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

Organism=Homo sapiens, GI38016914, Length=281, Percent_Identity=25.9786476868327, Blast_Score=76, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17537827, Length=321, Percent_Identity=26.4797507788162, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17537829, Length=321, Percent_Identity=26.4797507788162, Blast_Score=75, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46364; Mature: 46232

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS00467 RIBOSOMAL_L2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRTYHDPLHRGITLNASDAAEAMVMQLIDAAPFQRLRRIRQLGPAFLTFHGAESSRFT
CCCCCHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCHHH
HSLGVFHLARLALERLLQFDSGLEEHRGLLYGAALLHDLGHAPLSHTGEEIFGLDHETWS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHH
ARLVREHPAVRAPLEAYAPGTADGVANLLERGSSPHSVIKALVSSQLDCDRLDYLLRDSY
HHHHHHCCCCCCCHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC
STGTHYGQLDLERILSALTLAPDGAMAIHPKGLMAVEHYLVVRNLMYRSVYNHRLNVVCN
CCCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLLEQVVSTARQFGAAHVWADKIMATWLWSLNQLDLDTFLANDDLRTGYHLLRWQDEGPA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEECCCCCC
PLAELCKRFLNRHLLKALAVQHLSHSNQLEVLTLARQLAERQGFDPALCCGLRHQQQRGY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
HPYKGGLRLWDGRQLRALEQASPLVASLITPADSSWLIYPREIHGELQAALAT
CCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLRTYHDPLHRGITLNASDAAEAMVMQLIDAAPFQRLRRIRQLGPAFLTFHGAESSRFT
CCCCHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCHHH
HSLGVFHLARLALERLLQFDSGLEEHRGLLYGAALLHDLGHAPLSHTGEEIFGLDHETWS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHH
ARLVREHPAVRAPLEAYAPGTADGVANLLERGSSPHSVIKALVSSQLDCDRLDYLLRDSY
HHHHHHCCCCCCCHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC
STGTHYGQLDLERILSALTLAPDGAMAIHPKGLMAVEHYLVVRNLMYRSVYNHRLNVVCN
CCCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLLEQVVSTARQFGAAHVWADKIMATWLWSLNQLDLDTFLANDDLRTGYHLLRWQDEGPA
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEEECCCCCC
PLAELCKRFLNRHLLKALAVQHLSHSNQLEVLTLARQLAERQGFDPALCCGLRHQQQRGY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
HPYKGGLRLWDGRQLRALEQASPLVASLITPADSSWLIYPREIHGELQAALAT
CCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377; 7934828 [H]