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The map label for this gene is ctpA [H]

Identifier: 33863917

GI number: 33863917

Start: 1757156

End: 1758496

Strand: Direct

Name: ctpA [H]

Synonym: PMT1650

Alternate gene names: 33863917

Gene position: 1757156-1758496 (Clockwise)

Preceding gene: 33863914

Following gene: 33863918

Centisome position: 72.88

GC content: 56.0

Gene sequence:

>1341_bases
ATGAAGCCAATGTTGCCGACTACTAACTCCAGATCACATCCGCTGCGGCGCCTATGGCTTGCGTGGCTGAGCCTGGGTCT
TGGCGTGCTGCTGATGGCGGCTCCAGCCATGGCATTGAATGATGCCCAACAACTGGTCGTTGAAAGCTGGCGGCTCGTTA
ACCAGGGATATCTAGACCCAGCCAAGTTCGATGAGGTGCACTGGCGAAGGCTAAGAGAGCAGGCATTAGAGAAAACAATC
AACCGTAGTGACGAGGCCTATGAGGCCATCGAAGCGATGCTGCTTCCACTTGAAGATCCCTACACAAGACTATTGAGACC
AGACGACTACACCGCCATAAAAGCCGCCAATTTGGGCAGCGAGATCAACGGCGTCGGCCTACAGCTGGGGGCCCGCGCTG
AAGATGGCCAGGTCGTGGTTATCGCTCCGCTTGAAGGGTCCCCCGCGGCCGATGCAGGCGTCACAAGCGGCACGGCCTTA
CTCAGCGTCGATGGCCAGTCTCCACAATCCCTTGGCCTCGAAGCCACAGCTGCAAGGCTGCGGGGAGAAGTGGGCTCACA
AGTTGTAGTAAAGCTGCAACCCCCAAATGGATCTAGCGAAGAACTCACCCTCGAGCGACGCAGTGTGGATCTCAGGCCAG
TACGAACCCGCCGACTGAGGAGTGCTAAACACACCCTGGGCTACCTACGCATCACCCAGTTCAGCGAAGGAGTGCCCGAA
CAGGTCAAAGAAGCACTTCAGGAACTGTCAGAAAAAGAGATTGAAGGCCTAGTTCTCGATCTGCGCAATAACTCCGGTGG
GTTAGTGAGCTCTGGACTAGCAGTAGCGGATGCCTTCCTGAGTGGCTCCCCAATCGTGGAGACACGCAACCGAGAGCGCA
TTAACGAAGCAATCCCTTCTGCAATTGAAACCCTTTATGACGGTCCGATGGTGACACTGGTCAACGGAGGGACTGCCAGC
GCGAGCGAAATTCTGGCTGGTGCCCTGCAAGACAACAGCCGCTCACAGCTGCTTGGTAGCCGCACGTTTGGCAAGGGTCT
GATCCAAACACTCACCAACCTGAGCGACGGCAGTGGCCTGGCCGTGACGGTAGCCGGATACATGACTCCAAGCGGCCGAG
ACATTCAAAACCAGGGCATCGAGCCGGATCGAACTCTGGATCCTCCTGAACCCCTCAATCCTGGCGGGGAAGAAGACCGT
TGGTTGCATGATGCTGAACTCTGGATGGAGGCCCAACTCGACCGCGATCAGGATGCCCAGTTACAAACCAAAGAAGATCT
TCAGCTCGATAGTGCTGAAGATGTTGAATTCAAAACTCAGCAGAATCGTGATGATCCATGA

Upstream 100 bases:

>100_bases
CGTTCCTGAAACCAGTCGTAGACAGGTGAGGAGTTCGTCATGCAAATGAGGGTCCGGATTGCGAGAGTCTACTTAACGTC
CTGCATGGACAGCACCCGGC

Downstream 100 bases:

>100_bases
GTCTGCGCACATATCACGACCCTCTCCATCGCGGCATCACCCTCAATGCCAGCGATGCAGCAGAGGCCATGGTGATGCAG
TTAATCGATGCGGCGCCATT

Product: PDZ domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MKPMLPTTNSRSHPLRRLWLAWLSLGLGVLLMAAPAMALNDAQQLVVESWRLVNQGYLDPAKFDEVHWRRLREQALEKTI
NRSDEAYEAIEAMLLPLEDPYTRLLRPDDYTAIKAANLGSEINGVGLQLGARAEDGQVVVIAPLEGSPAADAGVTSGTAL
LSVDGQSPQSLGLEATAARLRGEVGSQVVVKLQPPNGSSEELTLERRSVDLRPVRTRRLRSAKHTLGYLRITQFSEGVPE
QVKEALQELSEKEIEGLVLDLRNNSGGLVSSGLAVADAFLSGSPIVETRNRERINEAIPSAIETLYDGPMVTLVNGGTAS
ASEILAGALQDNSRSQLLGSRTFGKGLIQTLTNLSDGSGLAVTVAGYMTPSGRDIQNQGIEPDRTLDPPEPLNPGGEEDR
WLHDAELWMEAQLDRDQDAQLQTKEDLQLDSAEDVEFKTQQNRDDP

Sequences:

>Translated_446_residues
MKPMLPTTNSRSHPLRRLWLAWLSLGLGVLLMAAPAMALNDAQQLVVESWRLVNQGYLDPAKFDEVHWRRLREQALEKTI
NRSDEAYEAIEAMLLPLEDPYTRLLRPDDYTAIKAANLGSEINGVGLQLGARAEDGQVVVIAPLEGSPAADAGVTSGTAL
LSVDGQSPQSLGLEATAARLRGEVGSQVVVKLQPPNGSSEELTLERRSVDLRPVRTRRLRSAKHTLGYLRITQFSEGVPE
QVKEALQELSEKEIEGLVLDLRNNSGGLVSSGLAVADAFLSGSPIVETRNRERINEAIPSAIETLYDGPMVTLVNGGTAS
ASEILAGALQDNSRSQLLGSRTFGKGLIQTLTNLSDGSGLAVTVAGYMTPSGRDIQNQGIEPDRTLDPPEPLNPGGEEDR
WLHDAELWMEAQLDRDQDAQLQTKEDLQLDSAEDVEFKTQQNRDDP
>Mature_446_residues
MKPMLPTTNSRSHPLRRLWLAWLSLGLGVLLMAAPAMALNDAQQLVVESWRLVNQGYLDPAKFDEVHWRRLREQALEKTI
NRSDEAYEAIEAMLLPLEDPYTRLLRPDDYTAIKAANLGSEINGVGLQLGARAEDGQVVVIAPLEGSPAADAGVTSGTAL
LSVDGQSPQSLGLEATAARLRGEVGSQVVVKLQPPNGSSEELTLERRSVDLRPVRTRRLRSAKHTLGYLRITQFSEGVPE
QVKEALQELSEKEIEGLVLDLRNNSGGLVSSGLAVADAFLSGSPIVETRNRERINEAIPSAIETLYDGPMVTLVNGGTAS
ASEILAGALQDNSRSQLLGSRTFGKGLIQTLTNLSDGSGLAVTVAGYMTPSGRDIQNQGIEPDRTLDPPEPLNPGGEEDR
WLHDAELWMEAQLDRDQDAQLQTKEDLQLDSAEDVEFKTQQNRDDP

Specific function: Cleavage of the 16 C-terminal residues from the D1 precursor of photosystem II. May be involved in protection of the bacterium from thermal and osmotic stresses [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=309, Percent_Identity=28.4789644012945, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 48520; Mature: 48520

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPMLPTTNSRSHPLRRLWLAWLSLGLGVLLMAAPAMALNDAQQLVVESWRLVNQGYLDP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
AKFDEVHWRRLREQALEKTINRSDEAYEAIEAMLLPLEDPYTRLLRPDDYTAIKAANLGS
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCCCC
EINGVGLQLGARAEDGQVVVIAPLEGSPAADAGVTSGTALLSVDGQSPQSLGLEATAARL
CCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHCCHHHHHHHH
RGEVGSQVVVKLQPPNGSSEELTLERRSVDLRPVRTRRLRSAKHTLGYLRITQFSEGVPE
HHCCCCEEEEEEECCCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCH
QVKEALQELSEKEIEGLVLDLRNNSGGLVSSGLAVADAFLSGSPIVETRNRERINEAIPS
HHHHHHHHHHHHHHCEEEEEEECCCCCEECCCHHHHHHHHCCCCCEECCCHHHHHHHHHH
AIETLYDGPMVTLVNGGTASASEILAGALQDNSRSQLLGSRTFGKGLIQTLTNLSDGSGL
HHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE
AVTVAGYMTPSGRDIQNQGIEPDRTLDPPEPLNPGGEEDRWLHDAELWMEAQLDRDQDAQ
EEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCC
LQTKEDLQLDSAEDVEFKTQQNRDDP
CCCHHHCCCCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MKPMLPTTNSRSHPLRRLWLAWLSLGLGVLLMAAPAMALNDAQQLVVESWRLVNQGYLDP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
AKFDEVHWRRLREQALEKTINRSDEAYEAIEAMLLPLEDPYTRLLRPDDYTAIKAANLGS
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEECCCCC
EINGVGLQLGARAEDGQVVVIAPLEGSPAADAGVTSGTALLSVDGQSPQSLGLEATAARL
CCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHCCHHHHHHHH
RGEVGSQVVVKLQPPNGSSEELTLERRSVDLRPVRTRRLRSAKHTLGYLRITQFSEGVPE
HHCCCCEEEEEEECCCCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCH
QVKEALQELSEKEIEGLVLDLRNNSGGLVSSGLAVADAFLSGSPIVETRNRERINEAIPS
HHHHHHHHHHHHHHCEEEEEEECCCCCEECCCHHHHHHHHCCCCCEECCCHHHHHHHHHH
AIETLYDGPMVTLVNGGTASASEILAGALQDNSRSQLLGSRTFGKGLIQTLTNLSDGSGL
HHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE
AVTVAGYMTPSGRDIQNQGIEPDRTLDPPEPLNPGGEEDRWLHDAELWMEAQLDRDQDAQ
EEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCC
LQTKEDLQLDSAEDVEFKTQQNRDDP
CCCHHHCCCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8034700; 8058761; 8590279; 8905231 [H]